Difference between revisions of "Os03g0650900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0650900| Description = SPX, N-terminal domain containing protein| Version = NM_001057323.1 GI:115454374 GeneID:4333590| Length = 4694 bp| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0650900|
 
GeneName = Os03g0650900|

Revision as of 19:39, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0650900

Description

SPX, N-terminal domain containing protein

Version

NM_001057323.1 GI:115454374 GeneID:4333590

Length

4694 bp

Definition

Oryza sativa Japonica Group Os03g0650900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:26028503..26033196

Sequence Coding Region

26028909..26029014,26029110..26029168,26029439..26029576,26030110..26030373,26030453..26030697
,26031265..26031472

Expression

GEO Profiles:Os03g0650900

Genome Context

<gbrowseImage1> name=NC_008396:26028503..26033196 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:26028503..26033196 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagttcggtgcaatatatgaagagtatcttcgggaacagcaagacaaatacctaacaaagtgctcacatgtggagtacaaacgtctcaaaaaggtactgaagaaatgtcgagttggtcgctcattgcaagaagactgccccaatggtgaccagcaggaggggaacaacgaatctccagatatttgcaaatgcaattcatgcacattgtgtgatcaaatgttctttacagaacttactaaggaggcttcagaaatagctggctgtttcagctctagagtacaacgtctcctaaatcttcatgtcccttcaggatttctacgctatatttggcgtgtaaggcaatgtttcatagatgatcaacaaatcatggttcaagaaggcagaatgttacttaattatgtaaccatgaatgctatcgctatccgtaaaattctgaagaagtatgacaaaatacatggttctgtcagtggtagagatttcaagagcaagatgcaaactgatcatattgaactgttgcagtccccttggctgatagaactgggtgctttccatctaaactgcaatagttcagatattgatgaaactgtggggttccttaagaatgagttcttcaagaatttttcctgtgatttgaccgaagcacgaccactaatgactatggctatttctgaaactatgaagtatgagtacagcctaacttgtccaatttgcttggatactttgttcaacccatatgcacttagctgtggccatctcttttgcaaaggctgtgcttgtggagctgcttctgtgtacatctttcaaggtgttaagtctgcacctcctgaggcgaagtgtcctgtatgccgatcggatggtgtctttgctcatgctgtgcatatgactgaacttgacttgctcatcaaaacaaggagcaaggattactggagacagagactgcgagaagagcggaatgagatggttaagcaatccaaagaatactgggactctcaggctatgctgtcaatgggaatttga</cdnaseq>

Protein Sequence

<aaseq>MKFGAIYEEYLREQQDKYLTKCSHVEYKRLKKVLKKCRVGRSLQ EDCPNGDQQEGNNESPDICKCNSCTLCDQMFFTELTKEASEIAGCFSSRVQRLLNLHV PSGFLRYIWRVRQCFIDDQQIMVQEGRMLLNYVTMNAIAIRKILKKYDKIHGSVSGRD FKSKMQTDHIELLQSPWLIELGAFHLNCNSSDIDETVGFLKNEFFKNFSCDLTEARPL MTMAISETMKYEYSLTCPICLDTLFNPYALSCGHLFCKGCACGAASVYIFQGVKSAPP EAKCPVCRSDGVFAHAVHMTELDLLIKTRSKDYWRQRLREERNEMVKQSKEYWDSQAM LSMGI</aaseq>

Gene Sequence

<dnaseqindica>4183..4288#4029..4087#3621..3758#2824..3087#2500..2744#1725..1932#tccgttgcgctcgtctcctcctctcgccgcgccgccgccccccgcccccacgatcgacgactcgccgcgccgccgccgccgccgccgccaacgcatgcaggtagtgatcctgatccctcgccgccggaaagcggcaacagtttctccttgttccgtccgcgtgtgcttcttcccgccgcgcgccgcgcgccatttgctctttcgatcggcgggcggttgttaattttgtgggttgatgggggtgtagatcatcaggacgaaatttgccttctccaactctgctgctagagcgcttcattcgggagagggcacaacgcggatcgaatgcgcacttccacatttatttccttttctctttgttattaccaaaaacatttttcttcttcttcattcttttattttttttggttcctggtagttcgattcatgccggaatagattccgttggtcactgtccaatgtccatgtcccctgttcctaattcctttgtgagccttttctttttcatctgacgtgtgagttgagttgtcagtcgtgtttacactaatccattgcatttgtccatgtaaagcagatgatttgcttttcctgggtgagttatgagtcacatgcaattgcttcttaacctgcacaacctctaaattaagccaaaaggcctagtcatgttatccagattacttgtactggccatctaaaaaaaggattactgttgttgtttgttcttcaagcgattgatactgacttcgtgtcatattaggacatccagatcagttaaatggatggttttctacgtcaggtattacaaagtcagctctcatcttattgtctaaccacataccttattgttttgaatgaagtcttaacacatattatgattctaacttgatccattagtgatatgtgctttttggaagattctaaatatgtggtctctgttttccttgaaaggaactactttcaacatacgtggtcatgtaataatggaatgtattcctagaagtcagtacaagtgtgcaatccgttcaaatcattgtctgctacttttctcagcgtgttgtcgtcttatcctattccaacgaggggcaactcctatctgtttttggtgggcttgtggccagctgggttgataaacattgccacatgttcaagtttttgttcagtgctgagcgcaagcaacaaaccaaaatggggggaacagtagtttcttgttttgttttctttaagttgaactaatattttttttaaaaaaaagacacagctaatggcttatgtatgatattagttttttttaggatcataagttttgcaccttttatggtccatatttaccatcttattaatttttaaccattgtaattgtgcgatatacctgctatgtcaagtaagcttttgttatgtactaaaactatctgtctgatttaatgcatgcaagcctaattttgttccttgctacaagttatgatattttttagggtggttcatcgctacaagctattcctgaagaaagtgtctttactttttaaaatttcttattgtgcaagtatagaactcactgggagttgtaatacctcacggcatgattactgtgttggaaaagagtacagctgaaacactctttctttttttttttatcaggggatgatattgtaggtaactatattttgatgtggtacaatgcaacttcacatggtctcagctagttttcagctttttctgtaggcaagatgaagttcggtgcaatatatgaagagtatcttcgggaacagcaagacaaatacctaacaaagtgctcacatgtggagtacaaacgtctcaaaaaggtactgaagaaatgtcgagttggtcgctcattgcaagaagactgccccaatggtgaccagcaggaggggaacaacgaatctccagatatttgcaaatgcaattcatgcacatgtatgttcaacttcctgctttcatctaatagcatgacagagtaccaattttctattttctttcttcgattactccaacctgtgttttttacatagaactcagagatttgtgaggaactaaatatatcttgttataatttactgggaattgtgtatagattacattcacgatgggttttaaaacagtgcagtttctgtttatgatgatttatcttactagtagtaatatggcctgcaatgcacccaaaattataccaactgattcttccctttggtaaaagtataaggactctaatttcatttcatacaatctaattctctgcctcaaagattacatataatagctcggaaggttaggtagctcaggttgtctatttgataaatagctgtgaagaattatatgtcctatcagattacatgattttgcaacaaaacttgtactacttatcttgaatatttggctaaatcatttctttcatgtgatgtgttggctatcacctttcttgtcttccacttaatctactatctgtgcttttcagatcctgacttccaatattttcttgttcagtgtgtgatcaaatgttctttacagaacttactaaggaggcttcagaaatagctggctgtttcagctctagagtacaacgtctcctaaatcttcatgtcccttcaggatttctacgctatatttggcgtgtaaggcaatgtttcatagatgatcaacaaatcatggttcaagaaggcagaatgttacttaattatgtaaccatgaatgctatcgctatccgtaaaattctgaagaagtatgacaaagtaagtgttcgtcttctagtaggcatcatacatgctcactgttaaaggtgattgtgctaataagtggatgattttgcagatacatggttctgtcagtggtagagatttcaagagcaagatgcaaactgatcatattgaactgttgcagtccccttggctgatagaactgggtgctttccatctaaactgcaatagttcagatattgatgaaactgtggggttccttaagaatgagttcttcaagaatttttcctgtgatttgaccgaagcacgaccactaatgactatggctatttctgaaactatgaagtatgagtacagcctaacttgtccaatttgcttggtgagaaactgttcttaaatttatgttttcttctaaatatctttaagtgttgtgccttcttactaagtaaaaagatgacgatagctaatttattggctttttgtaacaaacattataagcagtgacgttcagccttcaccagcaatacatagttcttgatgaatagtttttggctgctgcagtcgtcaagtgcacttggatgttgccatgacttctacagccagttgatacaaacaatcagttctgttgcacaaattttctgtagtatagcatggtattcgtatttaaattttttttaaaaaaaactgacacattatttagtaaagtttgaagtgggtaaggcaattatttagtaagttagctgcagctaccgaaaaggaggtaggttgacctggagaaaatgtgggtgaggaagtttgcggagaatgaaactcacccaaatattgcaatcccttgctgattgtatctgccggatggtgagtctttggtagaatgtacgaactactaaacttaagatttcgtcatgtgcccaggatactttgttcaacccatatgcacttagctgtggccatctcttttgcaaaggctgtgcttgtggagctgcttctgtgtacatctttcaaggtgttaagtctgcacctcctgaggcgaagtgtcctgtatgccgatcggtacgtatgcatcgtgtatatattttttctatatgttacaaagcttcatctgttgctgtgaattttataatatttatttttatcgtccaccctctcctattctttcatgccaacattgcaacagtatccgtagaaactctcagctttcaaccattgttttatgcttgaacttgctgctaagtaatgcaactaccatacagaccagaatatgatttatccattgcattacttcagacttccatgttaatggtttgtatttactgctctcaggatggtgtctttgctcatgctgtgcatatgactgaacttgacttgctcatcaaaacaaggtattggaagttaatttctcttatgcaagaaataaatataaaaagatactagtatctctttttcatgatctaatttgaatctgcatgttgatcaggagcaaggattactggagacagagactgcgagaagagcggaatgagatggttaagcaatccaaagaatactgggactctcaggctatgctgtcaatgggaatttgactgagatctgaagttacaatgatcgccattcattgcttgcattggtgtcaaaccaaaaataatcaggtcgaccataatctcaagcgtggagatcatccaagatgattttaacttattaactgccagtctcctaaaagttgcaatcagtgaggactaccttgggatagcacaggctaacacagctgaggttattttattttagctcttgaagaagcaattccattccattattttttgtcctaatgttgtcgcctgatatagtttaatttggaaatgcaaccatatttaattaattttctttggaccttcaaatgtagtttggaacaatttatacgcaatttatctgttctttgctttgtaaaaacgagtgtagaaatgtcttatttgaatgtctctggctcgctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0650900, RefSeq:Os03g0650900