Difference between revisions of "Os03g0694900"
(Created page with "{{JaponicaGene|
GeneName = Os03g0694900|
Description = Similar to Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS)|
Version = NM_001057508.1 GI:115454744 Ge...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0694900| | GeneName = Os03g0694900| | ||
Revision as of 19:41, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0694900 |
|---|---|
| Description |
Similar to Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS) |
| Version |
NM_001057508.1 GI:115454744 GeneID:4333799 |
| Length |
7519 bp |
| Definition |
Oryza sativa Japonica Group Os03g0694900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:28587296..28594814 |
| Sequence Coding Region |
28587659..28587739,28587921..28587980,28588099..28588268,28588367..28588439,28588562..28588627 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:28587296..28594814 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:28587296..28594814 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtccagcgttacccctgctgccgacgcgcagccactcgatgagaaagagctggagcggaagctgaagaaagatcagaaggcaaaagagaaagaggaaaaaaggcttaaggcgaaggcaaaggaggcggctaggctccaggcacaagcagcttcagatggacctaagaaaagcgagaagaagcaaaggaagaaagctgtggaggatgagaatcctgaggatttcattgatccagacactcctcatgggcagaagaaatttcttgcatctcaaatggccaagcagtatagcccaactgctgttgagaaatcatggtattcctggtgggaatcatcaggatattttggggcagatgctgcaagctcaaagccaccatttgttatagttttgccacctccaaatgtcactggagcgcttcatataggccatgcacttacggtggctatagaggattccatgatacgctggcggaggatgtcaggttataacactctgtgggttccaggagttgaccatgcaggaatcgctactcaggttgtagtggagaagaagcttatgcgtgaaaggaatttgacaaggcatgacatagggcgtgaagaatttgtatctgaagttctcaaatggaaagatgaatacgggggtaccatattgaatcaattgcgtaggcttggggcctcacttgattggtcccgcgagtgttttacaatggataaaccaagatcaaaggctgtaactgaagcttttgtcaggttgtacaaacaaggcctgatatatagggattatcgcctcgtgaattgggattgcacccttcgaacagcaatttctgacgtagaggttgattatctagagattaaagaggaaactatgttaaaggttcctggttataatacaactgtacaattcggtgtgttgatctcttttgcatatccacttgaggaaggattgggtgagattattgtcgcaacaacaagaatcgaaacaatgcttggggatacagccattgctgttcaccctgaggatggcagatacaagcatctgcatggtaggtatgcaatccatcccttcaatggccgaaagctcaaaataatctgtgatgctgagttagtggatcccactttcggtactggggctgtcaagattacacctgcccatgatccaaatgattttgaggttggaaagcgacacaaccttgagttcatcaatatcttcacagatgatggaaaaataaacaacaatggaggtgcacaatttgtaggaattccaagatttactgctcgagttgctgttattgaggcactgaaggcaaagggcttgtacaaggagacaaagaagaacgaaatgagtttgggtgtttgttcaagaactaatgatgtggtggagcctatgataaaaccccaatggtttgttaattgcaataccatggcacaagcaggtattgatgctgtaaggtccaaaagaattgagattattccacaacagtatgagcaagactggtatagatggcttgcaaatatacgtgattggtgtatttcgaggcagctttggtggggacatcgcgttcctgcttggtatgttatactagaagatgatcaagagaaaattctgggttctgctaatggccgttggattgttgctagaaacgaaagtgaagcaaacctggaggcacagcaaaagtatcctgggaagaaattcgagttacatcaagatcctgatgtgttggatacatggttttcatctggtctcttcccattaaccgtacttggttggccagatgatacagctgaccttaaagctttctaccctggttcggtgctagaaactggacatgacattatcttcttttgggtagcacggatggtgatgatggggatgcaacttggtggcgatgtgccatttgagaaggtttatttgcaccctatgatacgtgatgctcatggacgcaaaatgtccaagtcgcttggtaatgtcattgatcccgttgatgtgataaatggcatttcactggatggtctcctcaaacgtttgaaagaaggcaatctagatccaaatgaattgaacattgcaacagaagggaagaagaaggattttcctgatggcattgctgaatgtggtaccgatgctctccgttttgcactggtttcttacacttcgcagtctgacaagataaacctggatatcaaacgagttgttggatatcgacagtggtgcaataaattatggaatgccattcgttttgcaatgggcaagcttggcaatcattacactccccctgcaactatttctgtaactacaatgccacccatatgcaaatggatattgtcagtacttaataaagctattggcaaaactgtcacctcgttagaagcatacaaattttctgatgctacatctgctatatactcgtggtggcagtaccaactatgtgatgtgttcatagaagctataaagccttacttcttcaatgactctcaagagtttgaatcagcaagagctgcctctagagatgccttatgggtttgcttagacactggtttgcgcttgctccacccattcatgccttatgttacagaagagctctggcagcgtcttcctcagcctaaagattcttgtcggaaagattccattatggtatcagagtacccatctgttgttaaggaatggacggatgataaacttgaaaatgagatagatattgccttagatactatcaacaaactaagatctctgaagccaccatctgatacaaatgagagacgacctgcttttgcactttgccgaggccaagagattactgccaccattcagtgttatcagtctctagttgtgtctctttcttccacatcatctctaaagatcctgacagagaatgatgaaacgccacctgactgtgcaacagctgttgtaaacaaagatttgtctgtataccttcaactccaaggagctctcaatgcagaagttgagcttgaaaagctgaggaaaaagagagaagaaattcaaaagctccaacacgcactgtcacagaaaatggaagcttctggttacaaagagaaggctccacagaatgtccaggaggaggacatgagaaaactcactagtttttttgaacagctagagattatcagtgaagctgaaaagaagctagatgcaaaaactggcaataattga</cdnaseq> |
| Protein Sequence |
<aaseq>MSSVTPAADAQPLDEKELERKLKKDQKAKEKEEKRLKAKAKEAA RLQAQAASDGPKKSEKKQRKKAVEDENPEDFIDPDTPHGQKKFLASQMAKQYSPTAVE KSWYSWWESSGYFGADAASSKPPFVIVLPPPNVTGALHIGHALTVAIEDSMIRWRRMS GYNTLWVPGVDHAGIATQVVVEKKLMRERNLTRHDIGREEFVSEVLKWKDEYGGTILN QLRRLGASLDWSRECFTMDKPRSKAVTEAFVRLYKQGLIYRDYRLVNWDCTLRTAISD VEVDYLEIKEETMLKVPGYNTTVQFGVLISFAYPLEEGLGEIIVATTRIETMLGDTAI AVHPEDGRYKHLHGRYAIHPFNGRKLKIICDAELVDPTFGTGAVKITPAHDPNDFEVG KRHNLEFINIFTDDGKINNNGGAQFVGIPRFTARVAVIEALKAKGLYKETKKNEMSLG VCSRTNDVVEPMIKPQWFVNCNTMAQAGIDAVRSKRIEIIPQQYEQDWYRWLANIRDW CISRQLWWGHRVPAWYVILEDDQEKILGSANGRWIVARNESEANLEAQQKYPGKKFEL HQDPDVLDTWFSSGLFPLTVLGWPDDTADLKAFYPGSVLETGHDIIFFWVARMVMMGM QLGGDVPFEKVYLHPMIRDAHGRKMSKSLGNVIDPVDVINGISLDGLLKRLKEGNLDP NELNIATEGKKKDFPDGIAECGTDALRFALVSYTSQSDKINLDIKRVVGYRQWCNKLW NAIRFAMGKLGNHYTPPATISVTTMPPICKWILSVLNKAIGKTVTSLEAYKFSDATSA IYSWWQYQLCDVFIEAIKPYFFNDSQEFESARAASRDALWVCLDTGLRLLHPFMPYVT EELWQRLPQPKDSCRKDSIMVSEYPSVVKEWTDDKLENEIDIALDTINKLRSLKPPSD TNERRPAFALCRGQEITATIQCYQSLVVSLSSTSSLKILTENDETPPDCATAVVNKDL SVYLQLQGALNAEVELEKLRKKREEIQKLQHALSQKMEASGYKEKAPQNVQEEDMRKL TSFFEQLEIISEAEKKLDAKTGNN</aaseq> |
| Gene Sequence |
<dnaseqindica>364..444#626..685#804..973#1072..1144#1267..1332#1433..1516#1852..1929#2180..2263#2615..2694#2857..2914#3006..3308#3398..3568#4142..4332#4455..4857#5417..5668#5748..6248#6352..6449#6571..6670#6893..7038#7144..7309#acacgttcgctcttaccccaaaacccttcgccctcttgctgctgcgccgccgccgcacgcgattcctcctgctcccgtcggcggaagctaatcccccaccatcgcctgcctgccgcgtgcgccgatctccatccttgagcagcagcgcgcgggcgtcctgctgcttccgccgcatcctcgctctccggtgagcatccgtcctcttcgtcatcccatccctccctacccacacacctttttctcggattcgcgttaaccctagcttctcttctagcaccggaagcttttcaatttgccttaactttactaatgacagtttatttttgttaatcaaaaagtttggggttgttcaagtgaagcaccatgtccagcgttacccctgctgccgacgcgcagccactcgatgagaaagagctggagcggaagctgaagaaagatcagaaggtatttgatcaaacgctatcttcttaattatattcatttctttggcctagattacttctctgtcaccagctggactcaaaatggtcattgattttcacaatgataaaatccaaggtgttcactactattgcacatttgcacatgacaaaagtcactgatgtgtgaactgttctgcgcacaggcaaaagagaaagaggaaaaaaggcttaaggcgaaggcaaaggaggcggctaggctccaggtttgaacatgattagtgaatttctatgtgactgaatgtaaaaccagatatctactcggtgaaatgctctgtagagatgggtcttcttctattttcgtgctgatttacttttatgtaggcacaagcagcttcagatggacctaagaaaagcgagaagaagcaaaggaagaaagctgtggaggatgagaatcctgaggatttcattgatccagacactcctcatgggcagaagaaatttcttgcatctcaaatggccaagcagtatagcccaactgctgttgagaaatcgtaagatgctaccatgtttttctctatcttataattcatacaataagaaaggcctactgaacttctgcatgcatttgtttcctcccaccttaatgcagatggtattcctggtgggaatcatcaggatattttggggcagatgctgcaagctcaaagccaccatttgttatagtaagtggatcatacttcgaagtttagagagctgcttttcatggaatcaattatgtattttctacatgcagcaaattaccccatatatgttgctgccaaacagctaaattatttcttttcaggttttgccacctccaaatgtcactggagcgcttcatataggccatgcacttacggtggctatagaggtacatcattattcttgtggagacatatccatagtaacattatcgatgttagctaaacattggataatgattttaacgtccctgcatttaagcaatgcaggattccatgatacgctggcggaggatgtcaggttataacactctgtgggttccaggagttgaccatgcaggaatcgctactcaggtctatatcttcgatttgtttcaccatcatctgaaatttatcttacgaaacattcatctgcagataatatagattacttgatatatctttgtcgctattactttctattaaacatactaacaatttggtcagtcgccaatgggcaaacacatggcagcattggttatattaatttacaaaagctccaaatggaatgctgtcctttttctaaaatatcttttctcaaaataaattgtcaacacatgttgctcaattttgttcaccgtatcgttatttcccctctaaaccaataatcatttttgcctcttaaatttctctgatctcatgtatatcaggttgtagtggagaagaagcttatgcgtgaaaggaatttgacaaggcatgacatagggcgtgaagaatttgtatctgaagtaagcattatttttcctgaacaaaattttatgcctgttaactctgtattcttttgattataaatgagcaatttattaccattatcatatgaatatcgaaatggatccatgttgttagacgttatggaaattgtggtgagcatataatattatgcattcaaaggatagtgttctttacttgtttagtttcactccccatgtgtctacctttctcttgtttattctgttttatctatcatattctggacaggttctcaaatggaaagatgaatacgggggtaccatattgaatcaattgcgtaggcttggggcctcacttgattggtcccgcgaggtacatttactactttctgtagttaggagatagtatgagtatacttatgacaatacttgagcaataagttattttatactacctccatcctagaatataagaagttttagagttggacacggttattaagaaaataagtagaattaaatagaaagagcttgtgattggttaagaagtgaaggtaggtgggaaaagtgaatggtggagggttgtgattggttgggaagggaatgttggtggagaagttgttatattttgggacaaatcctgagtgctaaaagttgttatattttgggacggagggagtagttcttattctgaatattaacttcccctctacctttgcaacagtgttttacaatggataaaccaagatcaaaggctgtaactgaagcttttgtcaggttgtacaaacaaggcctgatatataggtcagttccatcaccttattttgttgttagagttgaacatttgttccttctattgattgcaccattatgtttttacctgtttgcttctatacagttgattttggttgttgtttgccatcttagttttatttttcctcttatggatggcatgcttctatacagggattatcgcctcgtgaattgggattgcacccttcgaacagcaatttctgacgtagaggttgttgagactttttattgtgtatgatggtggttgcaattgcacgcataactaaaattgatctgtttgtttgaaatttctgttttgttaggttgattatctagagattaaagaggaaactatgttaaaggttcctggttataatacaactgtacaattcggtgtgttgatctcttttgcatatccacttgaggaaggattgggtgagattattgtcgcaacaacaagaatcgaaacaatgcttggggatacagccattgctgttcaccctgaggatggcagatacaagcatctgcatggtaggtatgcaatccatcccttcaatggccgaaagctcaaaataatctgtgatgctgagttagtggatcccactttcggtactggggctgtcaaggtaggagctgatgctgacttcttgactatctctgtttaatttaatctacttggatcttctgcatacacgtttgcttatcttatatgcagattacacctgcccatgatccaaatgattttgaggttggaaagcgacacaaccttgagttcatcaatatcttcacagatgatggaaaaataaacaacaatggaggtgcacaatttgtaggaattccaagatttactgctcgagttgctgttattgaggcactgaaggcaaaggtactgctagatttgctaaatcatcctttcccagcatcttgtgatccaatctctaaacatttctttggactattgctggtttgttatggatttatgcaccattgcaaaatagtatcagagtgaaaagcacttaccatgaatgttttagggcattcttgcatatttatatttttctataactcagtccaaagaataaatctgatagtgtaagcgataaggagttagtggaatatagcatgaaggtttcctacttttgacattgtcctgtcccccatcctctctcatttttctattagtgggtctcttagcacagtattacttttatgagaaataagatgtcttggtttctgtagacatcagtggttctattaaatctcgaatcctgcattttgttaatgcttttatggtcgggtatctataacaactatgtgtaaaacagcattgaactgtttatgtaaccggataatctcaccaattttgttctgtcagctttctttccatttggtttgctgtgggttttgttcaagtattattgaagcttgattcttaccactttatgttctgcaatataagggcttgtacaaggagacaaagaagaacgaaatgagtttgggtgtttgttcaagaactaatgatgtggtggagcctatgataaaaccccaatggtttgttaattgcaataccatggcacaagcaggtattgatgctgtaaggtccaaaagaattgagattattccacaacagtatgagcaagactggtataggtaatgtctatcaccttctcatttgtcagttgagaattatctcacctattattgcaaatggcatcatatataggcaatggaattagaaggaaaataatccatccattgtcatgcccttacagatggcttgcaaatatacgtgattggtgtatttcgaggcagctttggtggggacatcgcgttcctgcttggtatgttatactagaagatgatcaagagaaaattctgggttctgctaatggccgttggattgttgctagaaacgaaagtgaagcaaacctggaggcacagcaaaagtatcctgggaagaaattcgagttacatcaagatcctgatgtgttggatacatggttttcatctggtctcttcccattaaccgtacttggttggccagatgatacagctgaccttaaagctttctaccctggttcggtgctagaaactggacatgacattatcttcttttgggtagcacggatggtgatgatggggatgcaacttggtggcgatgtgccatttgagaaggtaatggcaattgcatggatgtgcttcctgtgccattaaaactgtattataacattttagcagttcaatctatacatttcatccagtttttacactattgtctttcatacaacagtataattctgatcgaaattcaaacatgaaaaaatctatcttcaaattgctagctgtggatgttataatgaaggagaagtctatttgagactacttcgttcgtgagcatcattattttctgctctgccatttgtcttcaataggtcacactaatttcatctgaatgtactctagtagcttgttaattttggacatatattacatttttgtcaacatgctacttcgactaggcacaatacatggttgattgggaactatcctcagctgaacacacaagtttaccttttatttcagattttaaaatctattatttttcttagtttgatttttgaattacttcgtaacctaagacgtgtttaactgcaactagaagtattacttacactggtaagtgaggcgattctagctgaacacgcttaaattggggctctgctctcttgctcaggtttatttgcaccctatgatacgtgatgctcatggacgcaaaatgtccaagtcgcttggtaatgtcattgatcccgttgatgtgataaatggcatttcactggatggtctcctcaaacgtttgaaagaaggcaatctagatccaaatgaattgaacattgcaacagaagggaagaagaaggattttcctgatggcattgctgaatgtggtaccgatgctctccgttttgcactggtttcttacacttcgcaggttgtaattacacccatttcagtttctgttgtattatgcttgcaattcatctcctatggatttctctcttggttcacagtctgacaagataaacctggatatcaaacgagttgttggatatcgacagtggtgcaataaattatggaatgccattcgttttgcaatgggcaagcttggcaatcattacactccccctgcaactatttctgtaactacaatgccacccatatgcaaatggatattgtcagtacttaataaagctattggcaaaactgtcacctcgttagaagcatacaaattttctgatgctacatctgctatatactcgtggtggcagtaccaactatgtgatgtgttcatagaagctataaagccttacttcttcaatgactctcaagagtttgaatcagcaagagctgcctctagagatgccttatgggtttgcttagacactggtttgcgcttgctccacccattcatgccttatgttacagaagagctctggcagcgtcttcctcagcctaaagattcttgtcggaaagattccattatggtatcagagtacccatctgttgttaaggtattatcttaaagaagacataatttgtgtttggaaatataattgaaccaatatataagatagcacacatttaccaatggagacatatctttctttatgacaggaatggacggatgataaacttgaaaatgagatagatattgccttagatactatcaacaaactaagatctctgaagccaccatctgatacaaatgagaggtgcgtgtataatcatctatcttaatttgtgctattcctgtaatatacatgatgtgttgtcagattcattttgttcaatacgaaagcgtaatatatctcttgcttatttttccacaaacagacgacctgcttttgcactttgccgaggccaagagattactgccaccattcagtgttatcagtctctagttgtgtctctttcttccacatcatctctaaaggttctgccttaaacttctgtactattatgtatgcatgcatttctctattagcaaaatatttagattgaaatttatactgaaacctgggatggagtattattagtttagtacctcataaaacttatgtttcttaccatccatgcgtttgaaaattccccaaaagtcctgcctgagttgaaagatcttgacagaagaactgatctgatatttgaaaccattcagatcctgacagagaatgatgaaacgccacctgactgtgcaacagctgttgtaaacaaagatttgtctgtataccttcaactccaaggagctctcaatgcagaagttgagcttgaaaagctgaggaaaaagagagaagaaattcaaaagtaagcgtacttatgttatctcaaaatatcttgaatgaagatttgcctatgtttcactgttcccctgcgctagaaggatataacttactattaccatgcacgcaggctccaacacgcactgtcacagaaaatggaagcttctggttacaaagagaaggctccacagaatgtccaggaggaggacatgagaaaactcactagtttttttgaacagctagagattatcagtgaagctgaaaagaagctagatgcaaaaactggcaataattgacccagaaatctctgatgtgattttgaagatgcacatttgttgaagtttatctcaaattttttgcatggttaccttaatcatacctgaatgcccaggtactcatttttatattttgtagcttgaagagtatattcacagcattatacttttgtagtttttggttgtccaatcttccgtttgaaaatattttttgtggtgttgatttttctt</dnaseqindica> |
| External Link(s) |
