Difference between revisions of "Os03g0696300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0696300| Description = CCAAT-binding transcription factor, subunit B family protein| Version = NM_001057514.1 GI:115454756 GeneID:4333806| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0696300|
 
GeneName = Os03g0696300|

Revision as of 19:41, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0696300

Description

CCAAT-binding transcription factor, subunit B family protein

Version

NM_001057514.1 GI:115454756 GeneID:4333806

Length

3776 bp

Definition

Oryza sativa Japonica Group Os03g0696300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28651122..28654897

Sequence Coding Region

28651917..28652154,28652842..28652945,28653066..28653137,28653697..28653870,28654069..28654192
,28654277..28654341

Expression

GEO Profiles:Os03g0696300

Genome Context

<gbrowseImage1> name=NC_008396:28651122..28654897 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28651122..28654897 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtcgaggccggggggaaccaacctcgtggagccgagggggcagggcgcgctgccgtccggcataccgatccagcagccgtggtggacgacctccgccggggtcggggcggtgtcgcccgccgtcgtggcgccggggagcggtgcggggatcagcctgtcgggcagggatggcggcggcgacgacgcggcagaggagagcagcgatgactcacgaagatcaggggagaccaaagatggaagcactgatcaagaaaagcatcatgcaacatcgcagatgactgctttggcatcagactatttaacaccattttcacagctggaactaaaccaaccaattgcttcggcagcataccagtaccctgactcttactatatgggcatggttggtccctatggacctcaagctatgtccgcacagactcatttccagctacctggattaactcactctcgtatgccgttgcctcttgaaatatctgaggagcctgtttatgtaaatgctaagcaatatcatggaattttaagacggaggcagtcacgtgcgaaggctgaacttgagaaaaaagttgttaaatcaagaaagccctatcttcatgagtctcgtcatcaacatgctatgcgaagggcaagaggaacgggtggacgcttcctgaacacaaagaaaaatgaagatggtgctcccagtgagaaagccgaaccaaacaaaggagagcagaactccgggtatcgccggatccctcctgacttacagctcctacagaaggaaacatga</cdnaseq>

Protein Sequence

<aaseq>MESRPGGTNLVEPRGQGALPSGIPIQQPWWTTSAGVGAVSPAVV APGSGAGISLSGRDGGGDDAAEESSDDSRRSGETKDGSTDQEKHHATSQMTALASDYL TPFSQLELNQPIASAAYQYPDSYYMGMVGPYGPQAMSAQTHFQLPGLTHSRMPLPLEI SEEPVYVNAKQYHGILRRRQSRAKAELEKKVVKSRKPYLHESRHQHAMRRARGTGGRF LNTKKNEDGAPSEKAEPNKGEQNSGYRRIPPDLQLLQKET</aaseq>

Gene Sequence

<dnaseqindica>796..1033#1721..1824#1945..2016#2576..2749#2948..3071#3156..3220#actggatcctgattggcgttgcggccaatcaggatcctgctggatcctgattggatcctgattggcgttgcggccgtgtctctactgttgttgttgttgtgttttttttttcttttttacctttttttgccgccttggttttgatgcggagtctggatgtttctacttttggatggggtttttttaccttacccgaccgaattcgtgggtggattggatgcggttcatggaagggaacgggatcttggtcggctactcggatggggggtttgccggccggttgggatttcgggaaccggatcgaggaagaggcggaggagaattgatccgcggcggcggcggcggaggaggaggagagaatatgtggtgattttcatctgagcccggttgcagaagtccaactgtatcggagaatcttactcggttcgtactacagtcccccacgctggtattcaaggaatcttctctggatggaccagttcttggttggtcccggttctttcatgtccagttccccatggtggttcagttggcagttgtgccctagttgttgtaggagtaattgtcggtggctttaaatggttcatgctcgtcagttcttccgagcattccgaggtgtggaggaaggtcaaatcttgccattctattcattccattctatccctgcttcgtgctgtcagacttctgctgctgctgctgcatcaataaattttcctggatctcttctgctcagcttcgtcttcgtgccttttttcttgctgcaaactgaaactctgcctgagcaggtgagcgagcatggagtcgaggccggggggaaccaacctcgtggagccgagggggcagggcgcgctgccgtccggcataccgatccagcagccgtggtggacgacctccgccggggtcggggcggtgtcgcccgccgtcgtggcgccggggagcggtgcggggatcagcctgtcgggcagggatggcggcggcgacgacgcggcagaggagagcagcgatgactcacgaagatcaggggagaccaaaggtattgttccttttcctttttggagtggttgtaggtgctcggcccggttttatctctgcaattcgtgcttgttttgggaacaaattgtgcttgagttgaaaaaggagactaattcagatgttcccaattaggagtgcaagagtgtcctcttatggaggttggaatcgaaagtaggccaactttttgcgtgctggttaagtacgctatgagcatggtagaactctgaagtcttggtcacctcgttaatcctgaaacactcgtaggtgtatcgctgatctatcatgcattagcgttgcatatgcagtggctgtggagcctgtcgtgttgtgctgatgttgtaccatttgtcactactcactagatcgtgttcactctgttgtagctgcacttgcctggttctttgcttaagtaataccatcctatatacacagtcatgctaagaaagaatgacttaactagagtaaattcagaaaaatgatgatgtattttagttgttcttattatagtatctgacctttttttcgcaaaattttctgatcccttcgtatgtatccgctaatcataaaataattgttgattttaggagttccatgcgaagagtttttattttttttttgcattgggtcaacgccaaatgtaaaacatgctacctcatttcagtacgaactaatattgtttgaatgccagatggaagcactgatcaagaaaagcatcatgcaacatcgcagatgactgctttggcatcagactatttaacaccattttcacagctggaactaaaccaaccaattgtatgcattctttccttgttgagtttctgtttcttatagatcttgttgtgtctgcaactcgtgtatacttttccctgtcaatgtgctcattttctcatgctcatatcggtcattgtgcaggcttcggcagcataccagtaccctgactcttactatatgggcatggttggtccctatggacctcaagctatggtacctttttccttgccagtttaaattatcataaatcgtctcctgcctggtatgcaatccttactctcttggagtatgagatgcaattttggatctgaaatattgaagaactgcggatattggagcagctgtctatcactctaccttagtgatttcccacaaagggctgctgaaattgcagcgccctattttagcttttttctagttttgtataaaccatatttttttagacagctactagcatttacattaggaaacaccaatagccagagggattaagatcaagaagacagacatcaggcatgggcacagaactgcacaactgatagagtaacaagaccatggatacacctgaaccaaaaacggactttgtgattaccagaaatttggttgctttcgtagtatatggaagcctgaaagatctgaatgctcaaatgtctttaggttgactccaccactttggctagacttaacgtggtttaacttttataaaggttgaatatttactaaaactgtccttagagagttgctgaactttctgcatttttgtttcctgcagtccgcacagactcatttccagctacctggattaactcactctcgtatgccgttgcctcttgaaatatctgaggagcctgtttatgtaaatgctaagcaatatcatggaattttaagacggaggcagtcacgtgcgaaggctgaacttgagaaaaaagttgttaaatcaagaaaggttagtgaagttatatcttggttctcgcctcctgctaattctggaatttcctcctctagatcgagtgttgagttttcaggatgatccttccgtgtcctggttggatgtctcccatttactgaagtgtagagctcgataatttgttaagcactggcagtgttctgtagtgatagcggaatttggtgtttgatattgcagccctatcttcatgagtctcgtcatcaacatgctatgcgaagggcaagaggaacgggtggacgcttcctgaacacaaagaaaaatgaagatggtgctcccagtgagaaagccgaaccaaacaaaggtaacaaaattgcttcactttgagagaaacaagtgtcagtaggggtatttccatttctgatgaacagctttgtgtatccaaaaggagagcagaactccgggtatcgccggatccctcctgacttacagctcctacagaaggaaacatgaagtagcggctcgaaacctagaacagtggcttctgtccaccggcattcactcttgagggtggattcttgctccagaattgtgctgccatctttcaaatgatcttcatcgtgcaaagtaattatatgtacattcctctgaatgatctatgcaccaattgttgatcctggcagggtaataatctggatgtattgagtccatcacagtgcgaatgtcacgggtagatctgctgttttcaggcaattcattcttggctttctatcccacccgttgttgttgcaagttaagctagcagtacttgtctcagtgtccgtgagacgtttgtgtaagattaggttaaactagaagttgtaatgctgtattaagtgtttgtatttctaatatgaaccgtaacaaggccagagcagaactcgttatacatacaaaaattgatggccaggtcagtgttaccgtattattatgcaatggcagaagcttgcataaggcgtggtgccactcgttgctttgctgtatgtttttgagtttcattcgatttattttcactgttgagtttgtgggt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0696300, RefSeq:Os03g0696300