Difference between revisions of "Os03g0700400"
(Created page with "{{JaponicaGene|
GeneName = Os03g0700400|
Description = Similar to Lipoxygenase 1 (EC 1.13.11.12)|
Version = NM_001057528.1 GI:115454784 GeneID:4333821|
Length = 4402 bp|
...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0700400| | GeneName = Os03g0700400| | ||
Revision as of 19:41, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0700400 |
|---|---|
| Description |
Similar to Lipoxygenase 1 (EC 1.13.11.12) |
| Version |
NM_001057528.1 GI:115454784 GeneID:4333821 |
| Length |
4402 bp |
| Definition |
Oryza sativa Japonica Group Os03g0700400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:28850496..28854897 |
| Sequence Coding Region |
28850496..28850685,28851084..28851382,28852069..28852306,28852564..28852899,28852988..28853073 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:28850496..28854897 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:28850496..28854897 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgctgggagggatcatcgacaccatcacggggtcgtcgaagcagtcgcggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagctccaccgccgtcgacccaaacaacggcaaccgggggaaggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctgacgacgggggagtcgcggttcggcgtgacgttcgactgggacgtcgacaagctcggcgtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttcctcaagaccatcaccctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgccaactcctgggtctaccccgccgacaagtaccgttacgaccgcgtcttcttcgccaacgatgcctacctgccgagccagatgccggcggcgctgaagccgtaccgcgacgacgagctccgcaacctgcgcggcgacgaccagcagggcccctacgaggagcacgaccgcgtctaccgctacgatgtctacaacgacctcggctcccccgactccggcaaccctcgccccatcctcggcggctcccccgacaccccctaccctcgccgcggccgcaccggccgcaaacccaccaccaccgatccggactcggagagtaggctgtcgctggtggagcagatctacgtgccgcgggacgagcggttcgggcacctgaagatggcggacttcctgggctactcgatcaaggcgatcgcggaggggatcgtgccggcgatccgcacgtacgtggacaccacccccggcgagttcgactcgttccaggacatcctcgacctgtacgagggtggcctcaagctccccgatgtccccgcgctggaggagctccgcaagcgattcccgctccagctcgtcaaggacctcctccctgccgccggcgactatatcctcaagctccccatgcctcagattatcaaacaggacaaggaggcgtggaggacagacgaggagttcgcgcgggaggtgctcgccggcgtgaacccgatgatgatcacgcgtctcacggaattccctccgaaaagtagtctcgatcctagcaagttcggcgaccacaccagcatgatcacggcggcgcacatcgggagcaacctcgagggcctcaccgtgcagcaggcgctggacagcaaccggctgtacattctggaccaccacgaccggttcatgccgttcctgatcgacgtcaacggcctggagggcaacttcatctacgcgaccaggacgctcttcttcctgcgaggggacggcacgctggcgccgctcgccatcgagctgagcgagcctatgatccagggcgacgtcaccgccgccaagagcaccgtgtacacgccggcgtccaccggcgtcgaggcctgggtgtggcagctcgccaaggcctacgtcgccgtcaacgactccggctggcaccaactgatcagccactggctgaacacgcacgctgtgatggagccgttcgtgatcgcgacgaaccggcagctcagcgtgacgcacccggtgcacaagctgctgagcccgcactaccgcgacacgatgaccatcaacgccctggcgcggcagacgctcatcaacgccggcggcatcttcgagatgaccgtcttccccggcaagtacgcgctctggatgtcgtccatggtgtacaagaactggaacttcaccgagcagggcctccccgccgatctcatcaaaaggggagtggcggtggaggacgcgacgagcccgtacaaggtgcggctgctgatcaaggactacccgtacgcggcggacgggctggagatctggcacgcgatcgagcagtgggtgggcgagtacctggcgatctactacaccgacgacggcgtgctccgaggcgacgcggagctgcaggcgtggtgggcggaggtgcgggaggtcgggcacggcgacctcaagggcgcggcgtggtggcccaggatggacgccgtgtcggagctccgcgacgcgtgcaccaccatcatctggatcgcgtcggcgctgcacgcggcggtcaacttcggccagtacccgtacgccggttacctcccgaaccggccgacggtgagccggcggcggatgccggagcccgggacggaggcgtacggcgagctggggcgcgacccggagcgggccttcatccgcaccatcaccagccagctccagaccatcatcggcatctcgctgatcgaggtcctgtccaagcactcctccgacgaggtgtacctcgggcagcgcgacacgccggcgtggacgtcggacgccagggcgctggaggcgttccggcggttcagcgaccggctggtggagatcgaagggaaggtggtgggcatgaacggcgacgcggggctcaagaaccgcaatggcccagccgagttcccatacatgctgctttaccccaacacctccgacgtcaccggcgccgccgccggcatcaccgccaagggcatccccaacagcatctcgatctga</cdnaseq> |
| Protein Sequence |
<aaseq>MLGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLG EFLGKGVTCQLISSTAVDPNNGNRGKVGAEASLEQWLTSSLPSLTTGESRFGVTFDWD VDKLGVPGAIIVKNHHSNEFFLKTITLDDVPGRAGAVVFLANSWVYPADKYRYDRVFF ANDAYLPSQMPAALKPYRDDELRNLRGDDQQGPYEEHDRVYRYDVYNDLGSPDSGNPR PILGGSPDTPYPRRGRTGRKPTTTDPDSESRLSLVEQIYVPRDERFGHLKMADFLGYS IKAIAEGIVPAIRTYVDTTPGEFDSFQDILDLYEGGLKLPDVPALEELRKRFPLQLVK DLLPAAGDYILKLPMPQIIKQDKEAWRTDEEFAREVLAGVNPMMITRLTEFPPKSSLD PSKFGDHTSMITAAHIGSNLEGLTVQQALDSNRLYILDHHDRFMPFLIDVNGLEGNFI YATRTLFFLRGDGTLAPLAIELSEPMIQGDVTAAKSTVYTPASTGVEAWVWQLAKAYV AVNDSGWHQLISHWLNTHAVMEPFVIATNRQLSVTHPVHKLLSPHYRDTMTINALARQ TLINAGGIFEMTVFPGKYALWMSSMVYKNWNFTEQGLPADLIKRGVAVEDATSPYKVR LLIKDYPYAADGLEIWHAIEQWVGEYLAIYYTDDGVLRGDAELQAWWAEVREVGHGDL KGAAWWPRMDAVSELRDACTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRRMPEP GTEAYGELGRDPERAFIRTITSQLQTIIGISLIEVLSKHSSDEVYLGQRDTPAWTSDA RALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGIT AKGIPNSISI</aaseq> |
| Gene Sequence |
<dnaseqindica>1..190#589..887#1574..1811#2069..2404#2493..2578#2674..2781#2889..3196#3275..3538#3631..4402#atgctgggagggatcatcgacaccatcacggggtcgtcgaagcagtcgcggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagctccaccgccgtcgacccaagtgagcacaccccccccccccctctcacccccttgcatctcttctcttggtcgatttacctctcttgttcatttttgtccatacaaacttaaacactgtatgggcggccattgcctagctagctcggtcctcttttgatgggacatggaaagaagagaccaacgtcgaggaaaaagacaaccagggcaggagtaccagatgctaacccaaagtacaaaagctaaaaagtaaaaaaaaaaagaagaagtagtacctcactttgaactagatgcctgaaactatagctggtgtcgcgaggtggtgacacgtagtataattaacagctggggcatgattagtcgttggtttggactaattaacgggaacggattgggcatgatcctctcatcggcgtgcagacaacggcaaccgggggaaggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctgacgacgggggagtcgcggttcggcgtgacgttcgactgggacgtcgacaagctcggcgtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttcctcaagaccatcaccctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgccaactcctgggtctaccccgccgacaagtaccgttacgaccgcgtcttcttcgccaacgatgtgagttcttctctgctgcatactgtattatgctaccctgcatgtaaattacactattacagtaaccatttgccgttcttctttgtttggccagttcgtagatgctttatgtagtaagttgcttgattcacgtcgtttggtaggcgtccatagggaagatatttggttaggtgagaagtgaatggactttatgtaagttgtttatgtggtaggtgaagtggatttagtagcactgttcaaaaaaaagaagcagctctacaatggatatgcttcctgatgataacaacataaaagtggctatagtactagaaatctggaatagtccttggactcaggaaggcatgtgagttcacgtgagtcatcaactcatcatagttgccacagttcacagttcacacccatttagacggcattgtttcatggccccgagaagctttttcaacaagatcaacgacacagcactcgattttactttgcgaacacatgacacggtaaaagttttaaagtgaacagatagttgcctgcctcttgttcagcgtgcagccaggtgtccaaggccggtgccgtatcaagggactgatttgggcaatcaactaaccaattaagtaggagtaattagcgatgcgtattaatacgagtacgtgctataattaactttgtgatatattttctgcggcgacgcgcaggcctacctgccgagccagatgccggcggcgctgaagccgtaccgcgacgacgagctccgcaacctgcgcggcgacgaccagcagggcccctacgaggagcacgaccgcgtctaccgctacgatgtctacaacgacctcggctcccccgactccggcaaccctcgccccatcctcggcggctcccccgacaccccctaccctcgccgcggccgcaccggccgcaaacccaccaccaccggtacgcatcccccaaccaaaaattttacgattcttaaaaaaacattttaaggtctaaaaagttttttatacatttttacactagaatgtggcaccttcactcacatacctcccagttaggcccacctgtcatagtgaaacaccagaactggtccatgttcagctgcaatgtctcactgacggtgggcccggtttgtgtggttgaccgttgactttgactttgactgatgttttttgtacacgtatgcgtgcgtgcagatccggactcggagagtaggctgtcgctggtggagcagatctacgtgccgcgggacgagcggttcgggcacctgaagatggcggacttcctgggctactcgatcaaggcgatcgcggaggggatcgtgccggcgatccgcacgtacgtggacaccacccccggcgagttcgactcgttccaggacatcctcgacctgtacgagggtggcctcaagctccccgatgtccccgcgctggaggagctccgcaagcgattcccgctccagctcgtcaaggacctcctccctgccgccggcgactatatcctcaagctccccatgcctcagattatcaaacgtgagcgcaacctgtcatcgtagagacttttcatcagaatctttaggtgaaaactgacgatcgatgtaatgtttggctatgtatgcagaggacaaggaggcgtggaggacagacgaggagttcgcgcgggaggtgctcgccggcgtgaacccgatgatgatcacgcgtctcacggtgagtgatcagtgatgcgttcatgccaaattgatagtgaacacggctgctgcaacgtgaaatgtggcaaatttaactcgatgttgatcccgcaggaattccctccgaaaagtagtctcgatcctagcaagttcggcgaccacaccagcatgatcacggcggcgcacatcgggagcaacctcgagggcctcaccgtgcagcaggttggtttcgtacgtgcagattttgctatcaatcgtgacttgcaaacctgaattgttgctggcaaatggcaatagtgtgtggaaatttactgtgtcgcgatttgcaggcgctggacagcaaccggctgtacattctggaccaccacgaccggttcatgccgttcctgatcgacgtcaacggcctggagggcaacttcatctacgcgaccaggacgctcttcttcctgcgaggggacggcacgctggcgccgctcgccatcgagctgagcgagcctatgatccagggcgacgtcaccgccgccaagagcaccgtgtacacgccggcgtccaccggcgtcgaggcctgggtgtggcagctcgccaaggcctacgtcgccgtcaacgactccggctggcaccaactgatcagccactggtacgttcaaaaccagagcaatcgatcgcttcatcgacggagatttgtactcatcggttgttgttgttggttgatcaggctgaacacgcacgctgtgatggagccgttcgtgatcgcgacgaaccggcagctcagcgtgacgcacccggtgcacaagctgctgagcccgcactaccgcgacacgatgaccatcaacgccctggcgcggcagacgctcatcaacgccggcggcatcttcgagatgaccgtcttccccggcaagtacgcgctctggatgtcgtccatggtgtacaagaactggaacttcaccgagcagggcctccccgccgatctcatcaaaaggtagtagtattacacatctccattgatttttgtaaggcatcagtgggaagaatgtacaatttagtgcaaaatcgtgtgaattttttttgcaggggagtggcggtggaggacgcgacgagcccgtacaaggtgcggctgctgatcaaggactacccgtacgcggcggacgggctggagatctggcacgcgatcgagcagtgggtgggcgagtacctggcgatctactacaccgacgacggcgtgctccgaggcgacgcggagctgcaggcgtggtgggcggaggtgcgggaggtcgggcacggcgacctcaagggcgcggcgtggtggcccaggatggacgccgtgtcggagctccgcgacgcgtgcaccaccatcatctggatcgcgtcggcgctgcacgcggcggtcaacttcggccagtacccgtacgccggttacctcccgaaccggccgacggtgagccggcggcggatgccggagcccgggacggaggcgtacggcgagctggggcgcgacccggagcgggccttcatccgcaccatcaccagccagctccagaccatcatcggcatctcgctgatcgaggtcctgtccaagcactcctccgacgaggtgtacctcgggcagcgcgacacgccggcgtggacgtcggacgccagggcgctggaggcgttccggcggttcagcgaccggctggtggagatcgaagggaaggtggtgggcatgaacggcgacgcggggctcaagaaccgcaatggcccagccgagttcccatacatgctgctttaccccaacacctccgacgtcaccggcgccgccgccggcatcaccgccaagggcatccccaacagcatctcgatctga</dnaseqindica> |
| External Link(s) |
