Difference between revisions of "Os03g0706900"

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(Created page with "{{JaponicaGene| GeneName = Os03g0706900| Description = Zinc finger, RING-type domain containing protein| Version = NM_001057564.1 GI:115454856 GeneID:4333857| Length = 755...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0706900|
 
GeneName = Os03g0706900|

Revision as of 19:41, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0706900

Description

Zinc finger, RING-type domain containing protein

Version

NM_001057564.1 GI:115454856 GeneID:4333857

Length

7550 bp

Definition

Oryza sativa Japonica Group Os03g0706900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29209275..29216824

Sequence Coding Region

29209656..29209734,29209822..29209901,29210349..29210429,29210531..29210600,29210756..29210830
,29210910..29211115,29211394..29211643,29211723..29211768,29212990..29213059
,29213781..29213850,29215474..29215558,29215657..29215741,29215825..29215915
,29216472..29216605

Expression

GEO Profiles:Os03g0706900

Genome Context

<gbrowseImage1> name=NC_008396:29209275..29216824 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:29209275..29216824 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcggcggcgggcgcagacgtgggcgggggtggggaagacggcgcaggcggcggcggcgcacgcggcgctcttctgcttcacgctcctcctcgcgctcaaagtcgacggccgcacagcctactcctggtggattatattcatccctctatggctatttcatggcattgttgcccgtggaaggttttcaatgccagccccttcgcttcctcatggccgtcattgggctccttgccattcaattgttgcagcgccgttgcttattgcgtttgagctgctgctttgcatatatctcgaaagtttgagagttaaaagtaagccgactgttgatttgaagattgtattccttcctcttctggcctttgaagtgattattcttgctgacaatttcagaatgtgtagagctttaatgccaggagatgaagaaagtatgagcgatgaagctatttgggagacacttcctcacttttgggttgcaatttctatggtgtttcttatagctgctacaaccttcacacttttgaagctgtctggtgatgttggtgctttgggatggtgggatttgtttataaattatggaatcgcggagtgttttgcatttcttgtttgtactagatggtttaatcccatgattcataaatctcctaatcctggggaggctagctcatcatcagcggcaattagataccgtgattgggagagtggtcttctcctcccatcactagaagatcatgaacaagagaggctctgtggtcttcctgacataggaggtcacgtaatgaaaataccactggtgattttccaagttttgctttgtatgcgcttggagggtacgcctcctagtgctcagtatattccgatatttgcactgttctccccactgtttattttacaaggcgctggtgtccttttctctctagcaagattgttggagaaggttgttctactattacgaaatggaccagttagtcctaattaccttacaatctcatcaaaagtccgtgattgctttgcttttcttcatcgtggttcaaggcttcttggttggtggtctattgatgaaggcagcaaagaagagcaagcccggttattctatactgaatctactgggtacaacacattttgtggctatccacctgaggtagtcaggaaaatgcctaagagggatcttgcagaagaggtatggaggctccaagcagctttgggagagcaatcagaaattaccaaatgtaccaagcaggaatttgaaaggcttcaaaatgagaaggttctttgtaggatttgctacgagggggagatatgcatggtcttacttccttgccggcacagaacattatgcaagacttgttctgataagtgcaagaaatgtccaatctgccgtgtgcccattgaagaacgcatgcccgtatatgatgtttaa</cdnaseq>

Protein Sequence

<aaseq>MQRRRAQTWAGVGKTAQAAAAHAALFCFTLLLALKVDGRTAYSW WIIFIPLWLFHGIVARGRFSMPAPSLPHGRHWAPCHSIVAAPLLIAFELLLCIYLESL RVKSKPTVDLKIVFLPLLAFEVIILADNFRMCRALMPGDEESMSDEAIWETLPHFWVA ISMVFLIAATTFTLLKLSGDVGALGWWDLFINYGIAECFAFLVCTRWFNPMIHKSPNP GEASSSSAAIRYRDWESGLLLPSLEDHEQERLCGLPDIGGHVMKIPLVIFQVLLCMRL EGTPPSAQYIPIFALFSPLFILQGAGVLFSLARLLEKVVLLLRNGPVSPNYLTISSKV RDCFAFLHRGSRLLGWWSIDEGSKEEQARLFYTESTGYNTFCGYPPEVVRKMPKRDLA EEVWRLQAALGEQSEITKCTKQEFERLQNEKVLCRICYEGEICMVLLPCRHRTLCKTC SDKCKKCPICRVPIEERMPVYDV</aaseq>

Gene Sequence

<dnaseqindica>7091..7169#6924..7003#6396..6476#6225..6294#5995..6069#5710..5915#5182..5431#5057..5102#3766..3835#2975..3044#1267..1351#1084..1168#910..1000#220..353#aaagaaaagggctagagtctaagaggggagagagagagagagagagagaggaaggaacccttcgtcctcgtcgcctcacttttgtctcccactccttcgtcggcggctcggctcggcgcaggcgcagcggggagaagaccaaggaggagggagaggcggacgcgggagcggaagagattaatttccagtggggtttggggcgcggtgaggaggtgagggatgcagcggcggcgggcgcagacgtgggcgggggtggggaagacggcgcaggcggcggcggcgcacgcggcgctcttctgcttcacgctcctcctcgcgctcaaagtcgacggccgcacagcctactcctggtggtaacgctccctgctctaaaccctagctagcaccctcccccgtcctccgccgccacgggcctccgcttcgatctggcttagtggttcccgcgagattgcgagttgggggtggaattagtggctggcgtagtggtttttttgggggggtttccatcggatgcagatgcaggctgaggggggaatcggactagtcctttgcgtgcggttgagagtcgtcgcctgcttgtggtggtctggtgaactaattttctccaccagaacgattcagctctttcgtgtccttgtgtttggacattgatgagttgatgtaggcattttgctcacgcagagggtgtgcttcggttagtctttagctgatgctgggccacagttcctggttctactgaaggctgcactttgagagctcgttcttatttggttatgtatttgtttgagtaacccagcgctcttgttcctataatgatggtagcagattcagaagacattgttgactgctttgtctgtagcagtgaaggtattaataccgaatgctaattctgctatttccatcatgcaggattatattcatccctctatggctatttcatggcattgttgcccgtggaaggttttcaatgccagccccttcgcttcctcatggccgtcatgtaagaattggtatcaatttctctagttagtatgcacgtgcttaccccacattttgatctgatgggtttctatttgtatgtagtgggctccttgccattcaattgttgcagcgccgttgcttattgcgtttgagctgctgctttgcatatatctcgaaagtttgagaggtaggttcttaggttatctagatgagagaagctttggcgaccataaacgaatttcctggaggctcttataccccttctctctgtttgttcttccgcagttaaaagtaagccgactgttgatttgaagattgtattccttcctcttctggcctttgaagtgattattcttgctgacaatttcaggtaatgaatctgaacaattattttgcatgcctttaatactgtatcagtaaatgcacaaacgcactaccaattggcacgattgtatgtgccttactgttttatctgcttatgtattctgcaagtcttaagtgctgaatgtaactagtttttttttccaagattgtttttctgactaagcagctagcacttataaactgtgccatgaactcgtaatatgtcctaacctatttttggttacgtctgggattgtagtaagacgacctgacctattgtcaaatatggtatgcaccttcaagagcagctaacgcgttttagattataaatttcttgcaaccaaaagaattcaattatctggtgttctgttgttctcaatggccggttcttggtgtctgtctttttctccactggaaagaatactgaaattactcaactgcctctttgtttatttttgcacactgcttaggctgtgttcgccagtccacgttcccaaccggaacagtacgcgcggaaaacggagcggtccattagcgcgtaattaattaagtattagctatttttttttcaaaaatagattaatttgattttttaagcaacttttgtatagaaactttttgcaaaaaacacaccgtttaacagtttgaaaagtgtgcgcgtggaaaacgagggagaggggttggaaaaaggggtgccgaacacagccttagtcaggttcaatgatatctttctgttggttgcaaaataaattaatcatgatcattatactcatatggtttctgttggttgcaaaataaattaataattatcattatacttgacgacttggtatgtagagggtagcactaagtgcttgtttatcattgcttgtttgatagcaggttgaattatctcaattacaaatatactcaagtctactgttgatattattcttagttttgttattccgtacaacattttttttgctacataataataaatggtggcattctatccaaaagttacaaatggtgtttttaaaaggtaaatttcgcaatactgaactaccatttgcaaaactatcgcaaaagacacatgtttattcacaattttggagaactacactttttagttgcaaaatgtgcagcaaaactacactcctatcagagaaacaggtctgataggttgggccctctcatcagtcatcagtatttcatccgggttgtttctgtttctgatgcatgtgttggttaaaaagaaacagcctacacatgcaacactgactagtggacctagcctgtcaggctcattggcattttcagtaatttagttttgtgaaacttttcacaaccaaaggtattcctccgaaatcgtcgcaaaagtgtgtttgcgattgttttagcgatggcttttgtctggtttaatgaaattgaatcattgttaaaatttagcttgtcacacaatcagtactgttgttggtatgcaacgcataaattggatgcaattcataaagatatgtgctgaccaaatcatgaaccttaatttggccaaaaatatctagagatattagttgttaatacaatagtagcgctaaagttaatttggatgttaacctttattttttttccttgcattggtttgactattcagaatgtgtagagctttaatgccaggagatgaagaaagtatgagcgatgaagctatttgggagacacttcctgtgagtataagtactagtaactagtggttctttttaagaaattatctccattagcttcaatttgagcttaacttttatttactataagtaaccatacttctaccaaatcatcttataaaaatatattagaaacttttaaatacgatgataactaaattagagagctgaatatcatgcaacaaaatgcattatttttcagtccatttttagtggaatactggattggaataattttattgataagaataaatcagctgcaaggatgaaagtagaatctcatgaacttgtcaattgacgatgctgtattttcacattatggagcctatatgttggacttgtaccagcttaatatgggttgatgatttattaagtttaacaaagcaaaacatatacagtgaacaaatattcactacataatgaagtaaattctgttcaaagtttaagagaattaaaccttgatcagggcttgtgtttatagaattatggtttgatcatttcattctatctgatactctatttgtcacagcagaatgtaccgatttacattgtaatatttcacaccgatgtaaagtctatgaatgaataacattgtgtgtggctcttttataagttatctatgatatcatatttcttatcttgtgctgactgccgtgttctagaatagtgtggactatacactgttcttttcatcttatatgacacggcttctatttgctatcagcacttttgggttgcaatttctatggtgtttcttatagctgctacaaccttcacacttttgaagctgtctggtaaagtttcctggatctcctttttgttttttgaccttcattatggcatgtcctatttgttatgtgttttcaagcactgtagactgtagagttaaaaagtttgcttccttgcacatgactaatattgtttgtttgtctgctaagcctctatagttggtaggatatggctttctcaaaagtcgcttcattgtttactagagtggttgtcacaatgacattcttctaagagtgattaggtagttgcaaatgagacaatagttactaaaacaagattagattgtcaattaaccataaaatctggaaacattacattcagcagcttggttttgaaagccaggcagttttctactatttggaaatggctggtgatttcacctgaactggccgggtttctatttttggcagtttaaagcataaattcgtgcaagttaaaactatctttagtataagcaatacaatgttggatagagagcaaaaagatattcctagggttcccgtgatgtgaagacccaccagctgctttcccattcacatgcatatatgcaacatttttccatggtttctcactctaaagagtgtaatcttccaattcccaacacaaaatcgaagtcagcttctccacactgaatcaaactccttaatgcatttcatgtggtcgattttctttgacgatactttcaatttggtgatctattacagttcttttttttttggtatacgcaaaagacttgtgtagcattaaggagtttgaatgttacatcccctgcctagctccatatagctgggcaactacctaatgagtagtacaagattaattctcgtgatacaattgtgcgacctatgtgccagagcgatgttagaccacagattgagccatctttgctcctgcaacgatccagagtcttgcctctgcggtgattgctgcaatcaccgcatccagttcctactttcccaattgaaaatccggtccttcaagattacccaagcgaccaggatccatcaaagttctgagttgttccagttactaggggctgctttgtctgcctcctccatgagcttttaagtgctactttttaaatcaaatcatttattagttcgatgtgataagaacaacatgttcagcaaactatcttagattgtacaatattcaggtttttatttctcttcggcctaattttcctctactctgaaatgttttgtgatattattattgcatgacaggtgatgttggtgctttgggatggtgggatttgtttataaattatgggtgagactagtctcaatagcaattttctttattaacgagatctgttataatataatccagcaccttcttttttgtacagaatcgcggagtgttttgcatttcttgtttgtactagatggtttaatcccatgattcataaatctcctaatcctggggaggctagctcatcatcagcggcaattagataccgtgattgggagagtggtcttctcctcccatcactagaagatcatgaacaagagaggctctgtggtcttcctgacataggaggtcacgtaatgaaaataccactggtgattttccaagttttgctttgtatgcgcttggaggtacgtgtcatttatatatttctattgggttacatatggttgataaactggtagatgcacttgtagacagacattggatggggattggggagcttccaggaattgttttttaattatgtcatgtaacagaacacagtaacactatttggaaaaaatgcaaaacaagaactttgtccattttctgagttcgtctagggggtcaacgcttgttagtggctttttatcatgagctggatcaataataatcttgaaaacatcatttgcttttgttttttcagggtacgcctcctagtgctcagtatattccgatatttgcactgttctccccactgtttattttacaaggcgctggtgtccttttctctctagcaagattgttggagaaggttgttctactattacgaaatggaccagttagtcctaattaccttacaatctcatcaaaagtccgtgattgctttgcttttcttcatcgtggttcaaggtaatatttgatagctattatgagctacttctctatatgtttgttttcttgttggcttatcttactttgcatcacacaggcttcttggttggtggtctattgatgaaggcagcaaagaagagcaagcccggttattctatactgaatctactgggtacatgatagttgacttcagcctgttcatattgttaatttagatcctattaagctggtcaagttgtttcatttcctctatgtttacagttctttttgcgcatccacatccactttctatactgatttcctgcctggttgccttttggttttaaggtacaacacattttgtggctatccacctgaggtagtcaggaaaatgcctaagagggatcttgcagaagaggttacattctctcttttcattttattattgtttaccttattaatgttatgtgcactctattttatcataatataactattttcctacttattatctttcaggtatggaggctccaagcagctttgggagagcaatcagaaattaccaaatgtaccaagcaggaatttgaaaggcttcaaaatgtaccatctccttgtgacttgtgaagtttcatcattttacattatataaattggtgcaatacatcctatagacatgattgagtccattaacttgaggacatgccatttaggtcgctcagcttacacaataagatcacatatgtctgagtcgttcatgtttaaggagacttatgtgatatagccttgaaacttttagcaaactacaattttaggtaccgagaaatattgaattatcaagtttgtgggttcaagtgggacatccatacaactctaagaaactcatttcattttaaccttttctgttgttttatttaagaacctaagtcactacagctctatggcactaactgaaacttccagagaggcagagagcgctgatgatgatctgttggttgtctgaccggctctttttcctttgttgactaagtacttccttttccatttcaggagaaggttctttgtaggatttgctacgagggggagatatgcatggtcttacttccttgccggcacagaacattatgcaagtatgtttccagtcacttgttaagccactttggatgctcttacatgttgatttggaactgacagttttgttgatggttctgtgataggacttgttctgataagtgcaagaaatgtccaatctgccgtgtgcccattgaagaacgcatgcccgtatatgatgtttaaacttcgctaactcagatgaacgttacaaatttgtacatgttggttgtgcaatgtcgcgccatgtagtctcaatcacaactttaagctgattgaggtttgcacaagttcagaaaggtttaccgaatatggagaaaatataaagcatatcatgtctaaccaaaagcatgaaaaggtagttgatgatcattttgccggttacaattatgtactgtaagtatgtcatcggtggttttaacttttttttttggtgatcgatagatgctccagttagattgtgtagcatcttctcaagtttatgcattgtctgaatgtaaataagaatattgtcttgtttgagtgttgtagtgctctttggttgagaagagtagaaaagaaaaatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0706900, RefSeq:Os03g0706900