Difference between revisions of "Os03g0719800"
(Created page with "{{JaponicaGene|
GeneName = Os03g0719800|
Description = Phytochrome A|
Version = NM_001057631.1 GI:115454990 GeneID:4333930|
Length = 7810 bp|
Definition = Oryza sativa Ja...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0719800| | GeneName = Os03g0719800| | ||
Revision as of 19:42, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0719800 |
|---|---|
| Description |
Phytochrome A |
| Version |
NM_001057631.1 GI:115454990 GeneID:4333930 |
| Length |
7810 bp |
| Definition |
Oryza sativa Japonica Group Os03g0719800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:29930025..29937834 |
| Sequence Coding Region |
29931072..29931279,29931382..29931678,29931960..29932776,29932994..29935058 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:29930025..29937834 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:29930025..29937834 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcttcttcaagacctactcaatgttccagttcatccagcaggacccgccaaagctcccgggcaaggatattagcacaaacaactcttgatgctgaactcaatgctgaatatgaagaatatggcgactcctttgattactccaaattggttgaagcacagagaactactggacctgagcagcaagctcgttctgagaaggtcatagcttacttgcatcacattcagagagcaaagctaatccaaccatttggttgcttgttggcccttgatgagaagaccttcaatgttatagcgctcagcgagaatgcaccagagatgcttacaactgtcagccatgcagtgccaagtgttgatgatcccccaaagctacgcattggcaccaatgtatggtctcttttcactgacccaggtgccacagcactgcagaaggcactgggatttgctgatgtttccttgctgaaccctatcctagttcaatgcaagacctcaggcaagcctttctatgccattgttcatcgggcaactggttgtttggtggtagactttgagcctgtgaaacctacagaatttccagcaactgccgctggggctttgcaatcttacaaacttgctgccaaggcaatctctaagatccagtcactgccaggtggaagcatggaggtgctatgcaatacggtggtcaaggaactctttgacctcacaggatatgatagagttatggcttataagttccatgaagatgaccatggtgaagtctttgctgagatcacaaagcctggtcttgaaccttatcttggcctgcattatccagctactgatatccctcaggcagccaggtttcttttcatgaagaacaaagtccggatgatttgtgattgccgtgcaagatctatcaagattatcgaagatgagtcgctccacttggatattagcttatgtggttcaacactgagggcaccacacagttgtcatcttcagtatatggagaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagaatgaggatgatgatgaagttggggctgatcaacctgcacaacagcagaagaggaagaaactatggggactccttgtttgccaccatgagagccccagatatgttcctttcccattgcggtatgcctgtgagttcttagcacaagtgtttgctgtccatgttaacaaggagtttgaattagagaggcaagtacgcgagaaaagcatattgaggatgcaaacaatgctctctgacatgcttctcagggaatcctctcctctgagtatagtatcagggactcccaacatcatggaccttgtgaaatgtgatggtgctgctcttttgtatgggggaaaagtgtggcggctacagaatgctccaactgagtctcagatacgtgatattgccttctggctgtcagatgtccacagggattccactggcctgagtactgatagcctacatgatgctggatatccaggagctgctgctcttggtgatatgatttgtggaatggcagtagctaaaataaattccaaggatatcctgttctggttcaggtcacatacagctgctgaaatcagatggggaggtgcaaaacatgatccatcagacaaggatgacagcagaagaatgcaccctaggctgtccttcaaggcattccttgaggttgtcaagatgaagagcttgccttggaatgactatgagatggatgctattcactcattacaacttatacttagagggacactgaatgatgacatcaagccaacaagggccgctagtttagataatcaggttggtgatctcaagcttgatgggcttgctgaattgcaggcagttacaagtgaaatggttcgtctcatggaaacagcaactgtcccaatcttggctgtagatagcaatggattggtcaatggatggaatcagaaggttgctgagttgacagggttgagagtagatgaggctattggaagacacatacttaccgttgtagaggaatcttctgtaccagttgtccagaggatgctgtatttagctttgcaaggcaaagaagagaaggaagtgaaatttgaggtgaaaactcatggctccaagagagatgatggccctgttatcttggttgtgaatgcctgtgccagccgggaccttcacgaccatgttgttggtgtgtgctttgttgcacaagatatgactgttcataagttggtcatggacaaatttactcgggttgagggagactacaaagcaattattcacaatccaagcccgcttattcctcccatatttggtgctgacgaatttggatggtgctctgagtggaatgctgccatgacgaaattgaccgggtggcatagagatgaggtgatcaataagatgcttcttggtgaggtgtttgatagcaccaacgcctcctgtcttgtgaagaataaagatgcatttgtaagtctctgcattcttatcaacagtgcattagctggtgatgaaacagaaaaggctccattcagcttcttcgaccggaacgggaagtatatcgagtgccttctttctgttaacagaaaagtaaatgcagatggtgtcatcactggagtattttgtttcattcaagttcctagtcatgagctgcaacatgcactacatgtgcagcaagcctcacagcagaatgcactaacaaagttgaaagcttactcctacatgagacatgcaatcaacaaccctctctcaggtatgctttactctaggaaagcactgaagaacacaggtctgaatgaagagcagatgaaggaggtcaatgttgcagatagttgtcaccgccagctgaataaaatactttctgacttggatcaagatagcgtcatgaacaagtctagttgcttggatttggagatggttgagtttgtattgcaagatgtgtttgtggctgctgtaagtcaagtactcataacttgccagggaaaagggattagagtctcttgcaacctaccggagagatatatgaagcaaacagtctacggggatggtgttcgactacagcagattctctctgacttcctattcgtctcagtgaagttctctcctgttgggggttctgttgagatctcttgtagcctgaccaagaacagcattggggaaaaccttcatctcatagacctagaacttaggatcaagcaccagggcaaaggagtcccagcagatctgctgtcacaaatgtacgaggatgacaataaggagcagtcggatgaaggcatgagtcttgcggtttctagaaacctgctgaggctcatgaatggcgatgtccgacatatgagggaagctggcatgtcaaccttcatcctcagcgtcgaacttgcttctgctccagcaaaataa</cdnaseq> |
| Protein Sequence |
<aaseq>MSSSRPTQCSSSSSRTRQSSRARILAQTTLDAELNAEYEEYGDS FDYSKLVEAQRTTGPEQQARSEKVIAYLHHIQRAKLIQPFGCLLALDEKTFNVIALSE NAPEMLTTVSHAVPSVDDPPKLRIGTNVWSLFTDPGATALQKALGFADVSLLNPILVQ CKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYKLAAKAISKIQSLPGG SMEVLCNTVVKELFDLTGYDRVMAYKFHEDDHGEVFAEITKPGLEPYLGLHYPATDIP QAARFLFMKNKVRMICDCRARSIKIIEDESLHLDISLCGSTLRAPHSCHLQYMENMNS IASLVMAVVVNENEDDDEVGADQPAQQQKRKKLWGLLVCHHESPRYVPFPLRYACEFL AQVFAVHVNKEFELERQVREKSILRMQTMLSDMLLRESSPLSIVSGTPNIMDLVKCDG AALLYGGKVWRLQNAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGYPGAAALGDMI CGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFKAFLEVVKM KSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDNQVGDLKLDGLAELQAVTSEM VRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIGRHILTVVEESSVPVVQRM LYLALQGKEEKEVKFEVKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVH KLVMDKFTRVEGDYKAIIHNPSPLIPPIFGADEFGWCSEWNAAMTKLTGWHRDEVINK MLLGEVFDSTNASCLVKNKDAFVSLCILINSALAGDETEKAPFSFFDRNGKYIECLLS VNRKVNADGVITGVFCFIQVPSHELQHALHVQQASQQNALTKLKAYSYMRHAINNPLS GMLYSRKALKNTGLNEEQMKEVNVADSCHRQLNKILSDLDQDSVMNKSSCLDLEMVEF VLQDVFVAAVSQVLITCQGKGIRVSCNLPERYMKQTVYGDGVRLQQILSDFLFVSVKF SPVGGSVEISCSLTKNSIGENLHLIDLELRIKHQGKGVPADLLSQMYEDDNKEQSDEG MSLAVSRNLLRLMNGDVRHMREAGMSTFILSVELASAPAK</aaseq> |
| Gene Sequence |
<dnaseqindica>6556..6763#6157..6453#5059..5875#2777..4841#gctatttatttattcagctcgccactgccacccgagtgcggctgccttggctttgtctcgtctgcctcctcctcttcttcccgcacagtccacagctccgccactactggagcagagctgagctgagccgagcaggtaccccggtcgatccctcctcttcccccatctttgctgctcttcgcttgtatggttggatgctgccttagctagcatcatctgctgcttgttcgtttcttggagaggaacgggctgtgctgccctgtagtgtggtgttctctttctctgatgattttgggggggacaagagatgtggtgagagatgtttgggagttggggactggagggtgctcttgtttagttcgtattttttgtgatcagggcttagcatctttgagattaacaaaaaaacttgaacttgtatgcgagtgtgatgaactgatgattgatgattcagaaatcccctttcctggggtttgtgatggatggcaagcaaagaggataaaattcggtgcttgtctctgttgagatgggtttttttaggatttgtttagtggtggatttcttggactttgggtgccactgggtggttcttggtagagggggtactgcttcagtgcttctatccatgtgccacgtcagtgtccactgactcacccccaagccttggtacaggaagaggataggaacaaaggtgaggggtagtggaaagcagcaggaacaacttgctgatcctggagaagtgtgctgttgcagaaatattgagaagatttaatctggctttgcttagttgttgttttttattgtcagaaaagccataactcaaaatccccatatgttgggataaagagaaaacaaaatgatgagttcaattgaaaatgttgctacataagagcctactattggaggagcgagtagtccaaactccaaacgatgttgctcgtcctgttaaggggttttgctccaaatttggacttgcaaacaagttaagccacaagttgtttttttagccactgttgtatgcacagcaaagacttataaaacctgtttcagtaatataataagcggcttcagtttttttttagataagcgactcttttatgctttctataaaaccttccaaatgataaaaatgcacttgatgctgatcattcgtattagtccatcatactaatttcatggacatgctaagttcagctgtttagagcaagtccgtcttctgtgatgtctgtgaacttccattcagctaagatatttcacctttttattagtaactacaactgaatatggtttgtagtttctttttggtaaaaaatatagttccatgagatttttagataatgggaaatccgggtctttgcatcagcagatattacaacccaccattacaaaatttgcagcacgtctggctgaaagtaacaaacaccaagaggacaagaaaaccatatgaaaacattgacataaggactaattaaaagaatcaggaatcaatcatatttctaaatctccatccatggcgaagatttgcatgatcattgtctcaaaagtccgccatgcaaactggatattgtccttgtcctcacacttttgcaactggtcctaaaactgatcccagtatgtggcccagtatagtaccttcatatgagatttagttggggttttggtccatgagactagtgaaagtgcagcctccgtgagtccaaggtacctttgacggcttatttcaattattattttaaatgaaaccctttaaaaattatattactttggagaattttttttccctaacagatctattgttgctgtttttacagcgccaatctaaatagttttatgtatagtggtgaaagactcgaagttgtattagattaccatttaccatgcccatgtcagagtggcatacatgtgttaacagagggaatattaggctgaaaaagagtaaatctaaacatcaaactagcagaatttccaagcaattatgcagttagatactaataacatgtttgtatcgaaactaatatgcaacagtgtttcttatgaaatagctctaatatatatcctattaatctcccacactataatctagatccaccacaataagtataatggatatgttttagcgttcctccaatcaacgtagtaatttatagaatgtggaagctttccttttatactgtttttagaatgtaaactagatttcctgcatttcatgcctttgaaaatcttaaagactggccatgtaatgccaatgaaaatcagatgaatgacaaatacaaagtagagaatatcttatcacagattagtgaaggaaattcctcagaaaggttttggctttacaggagatgtcatgcttatttgctaacacaagtgcctgcagttgtatttggagaaactttagtcctctaatgctctaagatttgttgaccgttcttcaatagcatctttaacattgtattattttacttcgtcaaccgttcttacttcatccatcgagttctagcagggctaactttttatatttctcaagctcttgaaagacaaaaacatttctcttttctgaactgctcaggcaacaaggaagtctaatcatgtggttttaggcattgatcaaagttgatagtccacatttatccactagattgaggcatctattgatattagtggattgctatacttttttgttttactgattgatgttttcaacttatattatcttgttcagcaggagtggtatacagcagataagactcttgagtgattcaggtaatcaaggcagaagatgtcttcttcaagacctactcaatgttccagttcatccagcaggacccgccaaagctcccgggcaaggatattagcacaaacaactcttgatgctgaactcaatgctgaatatgaagaatatggcgactcctttgattactccaaattggttgaagcacagagaactactggacctgagcagcaagctcgttctgagaaggtcatagcttacttgcatcacattcagagagcaaagctaatccaaccatttggttgcttgttggcccttgatgagaagaccttcaatgttatagcgctcagcgagaatgcaccagagatgcttacaactgtcagccatgcagtgccaagtgttgatgatcccccaaagctacgcattggcaccaatgtatggtctcttttcactgacccaggtgccacagcactgcagaaggcactgggatttgctgatgtttccttgctgaaccctatcctagttcaatgcaagacctcaggcaagcctttctatgccattgttcatcgggcaactggttgtttggtggtagactttgagcctgtgaaacctacagaatttccagcaactgccgctggggctttgcaatcttacaaacttgctgccaaggcaatctctaagatccagtcactgccaggtggaagcatggaggtgctatgcaatacggtggtcaaggaactctttgacctcacaggatatgatagagttatggcttataagttccatgaagatgaccatggtgaagtctttgctgagatcacaaagcctggtcttgaaccttatcttggcctgcattatccagctactgatatccctcaggcagccaggtttcttttcatgaagaacaaagtccggatgatttgtgattgccgtgcaagatctatcaagattatcgaagatgagtcgctccacttggatattagcttatgtggttcaacactgagggcaccacacagttgtcatcttcagtatatggagaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagaatgaggatgatgatgaagttggggctgatcaacctgcacaacagcagaagaggaagaaactatggggactccttgtttgccaccatgagagccccagatatgttcctttcccattgcggtatgcctgtgagttcttagcacaagtgtttgctgtccatgttaacaaggagtttgaattagagaggcaagtacgcgagaaaagcatattgaggatgcaaacaatgctctctgacatgcttctcagggaatcctctcctctgagtatagtatcagggactcccaacatcatggaccttgtgaaatgtgatggtgctgctcttttgtatgggggaaaagtgtggcggctacagaatgctccaactgagtctcagatacgtgatattgccttctggctgtcagatgtccacagggattccactggcctgagtactgatagcctacatgatgctggatatccaggagctgctgctcttggtgatatgatttgtggaatggcagtagctaaaataaattccaaggatatcctgttctggttcaggtcacatacagctgctgaaatcagatggggaggtgcaaaacatgatccatcagacaaggatgacagcagaagaatgcaccctaggctgtccttcaaggcattccttgaggttgtcaagatgaagagcttgccttggaatgactatgagatggatgctattcactcattacaacttatacttagagggacactgaatgatgacatcaagccaacaagggccgctagtttagataatcaggttggtgatctcaagcttgatgggcttgctgaattgcaggcagttacaagtgaaatggttcgtctcatggaaacagcaactgtcccaatcttggctgtagatagcaatggattggtcaatggatggaatcagaaggttgctgagttgacagggttgagagtagatgaggctattggaagacacatacttaccgttgtagaggaatcttctgtaccagttgtccagaggatgctgtatttagctttgcaaggtgggtaaattagctatagtggtttttgtctattcccccagtatttttcaagtttctgcttatttggcaattcgatttatcaaaaaaactttggggttgctttctaatgttcaatgcctagatatgctacatttgattgtcatgctcatacattaatacttgacattcagctgcgttgtgggttgattgatttctaaacatttctttgattgatcaggcaaagaagagaaggaagtgaaatttgaggtgaaaactcatggctccaagagagatgatggccctgttatcttggttgtgaatgcctgtgccagccgggaccttcacgaccatgttgttggtgtgtgctttgttgcacaagatatgactgttcataagttggtcatggacaaatttactcgggttgagggagactacaaagcaattattcacaatccaagcccgcttattcctcccatatttggtgctgacgaatttggatggtgctctgagtggaatgctgccatgacgaaattgaccgggtggcatagagatgaggtgatcaataagatgcttcttggtgaggtgtttgatagcaccaacgcctcctgtcttgtgaagaataaagatgcatttgtaagtctctgcattcttatcaacagtgcattagctggtgatgaaacagaaaaggctccattcagcttcttcgaccggaacgggaagtatatcgagtgccttctttctgttaacagaaaagtaaatgcagatggtgtcatcactggagtattttgtttcattcaagttcctagtcatgagctgcaacatgcactacatgtgcagcaagcctcacagcagaatgcactaacaaagttgaaagcttactcctacatgagacatgcaatcaacaaccctctctcaggtatgctttactctaggaaagcactgaagaacacaggtctgaatgaagagcagatgaaggaggtcaatgttgcagatagttgtcaccgccagctgaataaaatactttctgacttggatcaagatagcgtcatgaacaagtacttttcttaccaagtattctaagttactctcttaggctcttgtatttactttcagctacctttgttcttcatcaattgtcagacctaacaggtcgatggtgttgctcttatagtcttatgtgtttgtattatcttcaagtggtcaattttgctctctcaaaatgaaagaatttgttgcaccaagtcccagtggttttttactcattactcagtacaaaccttatatatatattattagttattatcttcaaactaatttcctgctgctgtgttcacaggtctagttgcttggatttggagatggttgagtttgtattgcaagatgtgtttgtggctgctgtaagtcaagtactcataacttgccagggaaaagggattagagtctcttgcaacctaccggagagatatatgaagcaaacagtctacggggatggtgttcgactacagcagattctctctgacttcctattcgtctcagtgaagttctctcctgttgggggttctgttgagatctcttgtagcctgaccaagaacagcattggggaaaaccttcatctcatagacctagaacttaggtatgttagtcatgacatttgcacgcttactcttctttctgttaagacagtcttgaagtataaaatgatgtgtattaactcttgtggatcaatgtttttcaggatcaagcaccagggcaaaggagtcccagcagatctgctgtcacaaatgtacgaggatgacaataaggagcagtcggatgaaggcatgagtcttgcggtttctagaaacctgctgaggctcatgaatggcgatgtccgacatatgagggaagctggcatgtcaaccttcatcctcagcgtcgaacttgcttctgctccagcaaaataatcatgaaatggtatgtgaaattacttaattgactgtttaggctgctcagtttgttttgcttgagaccctgtttagatgggactaaaactttcaagtccctatcacatcggatgtttggacactaattataaatattaaacgtagactattaataaaacccatccataatcttggactaattcgcgagacgaatctattgagcctaattaatccatgattagcctatgtgatgctacagtaaacattctctaattatggattaattaggcttaaaaaatttgtctcgtgaattagctttcatttatgtaattagttttgtaagtagtctatatttaatactctaaattagtgtctaaatatagggactaaagttaacccgagtccactgctgaaactgcgtcttttcctgactcgtgctctatttaagcggctacaagagtgcctatagaaccaccatgtcctgtaggcttcgcttcttccattctgattttttttagctacaaacatatttttctaccatttctgaaatacattggcttatgacatcctcttaatctgtacactttgtcacttggtacagatgactagcaaatatgatttatctaaattgctgtccattttagagataaaactacaaacaattgatttcatatatttatttctcttgcgaacaacttccactttttcaaagtaccagtgtgatacttttgctaaagagttgtgttttctgcagttcgttcgtatagccacgacggtggcttgtgcttaggattggacgtacttgcagactgaagattcactggctgcagataaatggttgactttacagataaatggtcgtatggcacatttggttatgtactgtcgtcttcttcaccatgctaatgtcagtatgtgtaatcttctaagttgcaaatgcgtgctgttgctcgcctgaactcattaagattggaagtgaaaacaccaatctgtaatatgctgtatcttgatgctgagagcattcaagttactactacatgaataaaatatggtttgactttactcact</dnaseqindica> |
| External Link(s) |
