Difference between revisions of "Os03g0728900"

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(Created page with "{{JaponicaGene| GeneName = Os03g0728900| Description = Basic helix-loop-helix dimerisation region bHLH domain containing protein| Version = NM_001057685.1 GI:115455098 Gene...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0728900|
 
GeneName = Os03g0728900|

Revision as of 19:42, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0728900

Description

Basic helix-loop-helix dimerisation region bHLH domain containing protein

Version

NM_001057685.1 GI:115455098 GeneID:4333984

Length

1738 bp

Definition

Oryza sativa Japonica Group Os03g0728900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30538332..30540069

Sequence Coding Region

30538332..30538354,30538446..30538536,30538624..30538797,30538877..30538948,30539029..30539097
,30539175..30539240,30539338..30539529,30539635..30539750,30539889..30540069

Expression

GEO Profiles:Os03g0728900

Genome Context

<gbrowseImage1> name=NC_008396:30538332..30540069 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:30538332..30540069 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtattcaggccagcaatctgatcagtgtcctggtccaaatagtggcaaagaattcttggaggtgaactgggattctgttgcactgcatcagaagatggggtataacagtggcgcatttggatttcaagcttaccccatggtgttagaggatagagagggactctatagatcacccaacggcacattctgtcaaaatatccaactgagtgatgatcatagcagtggtgcaaagagaaggaaaggaatagatgatcacattgccttgttgaacccatcagcaagtagcaggatacaaaatgttggtgatcaacagacagaggtttcatctcagcaagagaggatatcaatggaggaggacaaccaaaagagttgctccaaaatgcaaagcaaggaagattcttctgatggtgatggtactaaagaagattatgttcatgtccgggcaaagcgaggccaagccactaatagccacagccttgcagaaagactgaggagaaaaaagataagcgagaggatgaagctgcttcaagatcttgtcccaggctgcagtaagatcactggtaaggcagtcatgcttgatgagataatcaattatgtacagtcactacaacgtcaagttgagtttttgtcgatgaaactcgcaactgtcaaccctgagcttagctttgatattgagcagattctatcgaaacaaatgatgctttcacaagatagacatcttgctttctacggagtcgacccaggatcaagtgccctcgttgctcattttaaccaaggaatcatgcagccagaaatgctgtgtaatgtttccaatcctgcagatgttttgcaggggacaacaattcaggacatctccacagttaaccagatacctgccatgtgggaaggacttcagaacattcctcacttgaactacaaccctggtggcgcaatggcagagggcagcaccaacaattctggttccatgaagattgaaaaatga</cdnaseq>

Protein Sequence

<aaseq>MYSGQQSDQCPGPNSGKEFLEVNWDSVALHQKMGYNSGAFGFQA YPMVLEDREGLYRSPNGTFCQNIQLSDDHSSGAKRRKGIDDHIALLNPSASSRIQNVG DQQTEVSSQQERISMEEDNQKSCSKMQSKEDSSDGDGTKEDYVHVRAKRGQATNSHSL AERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVN PELSFDIEQILSKQMMLSQDRHLAFYGVDPGSSALVAHFNQGIMQPEMLCNVSNPADV LQGTTIQDISTVNQIPAMWEGLQNIPHLNYNPGGAMAEGSTNNSGSMKIEK</aaseq>

Gene Sequence

<dnaseqindica>1716..1738#1534..1624#1273..1446#1122..1193#973..1041#830..895#541..732#320..435#1..181#atgtattcaggccagcaatctgatcagtgtcctggtccaaatagtggcaaagaattcttggaggtgaactgggattctgttgcactgcatcagaagatggggtataacagtggcgcatttggatttcaagcttaccccatggtgttagaggatagagagggactctatagatcacccaacggttagtagttcttagcttagtattatgcagttgatgaggtattagtagctcttaacttagtattgtgcagttgttgagatgtttttgaaggtaatgattttgtagataaatcctaatagtgacgataatctctcacaggcacattctgtcaaaatatccaactgagtgatgatcatagcagtggtgcaaagagaaggaaaggaatagatgatcacattgccttgttgaacccatcagcaagtagcaggatacaagtatgctttctttctgggctttgttatataatctgtgtgtggaattatatgtggatggtttcttctcttatgtcaatagctaaatgcattatattgttggtttagaatgttggtgatcaacagacagaggtttcatctcagcaagagaggatatcaatggaggaggacaaccaaaagagttgctccaaaatgcaaagcaaggaagattcttctgatggtgatggtactaaagaagattatgttcatgtccgggcaaagcgaggccaagccactaatagccacagccttgcagaaagagtaagcttctgagtagtactcttgactcttgctcctggttcagttttgctttgtgatcttcctttacttattcttgagttgatggaactcttttcagctgaggagaaaaaagataagcgagaggatgaagctgcttcaagatcttgtcccaggctgcagtaaggtaaatttcttcttttatctgcaagaaaatcttcgagactatcttgtgctgtgcaacttactgttgtcccctcacagatcactggtaaggcagtcatgcttgatgagataatcaattatgtacagtcactacaacgtcaagttgaggtactattagggtggtggttcagttatttcttggacagttggaatatcactctgtaatctaacacaatctgaacttgcagtttttgtcgatgaaactcgcaactgtcaaccctgagcttagctttgatattgagcagattctatcgaaacaagtaatgacaactgcagatcattctgatttttaagaatttgttatagataaattttgttcacagaaattattattttcagatgatgctttcacaagatagacatcttgctttctacggagtcgacccaggatcaagtgccctcgttgctcattttaaccaaggaatcatgcagccagaaatgctgtgtaatgtttccaatcctgcagatgttttgcaggggacaacaattcaggacatctccacagttaaccaggtaacttcaggtcacatattaagataacaaaatcacacatgaataaacaaaatcatagcaatgggttgatgtgaaccttgaatctagatacctgccatgtgggaaggacttcagaacattcctcacttgaactacaaccctggtggcgcaatggcagagggcagcaccaacaattctggtatatatgatccaaaatttgtcaaaaattatgtttagtactagtgatatatcaaactcatggaaatgttcctcctttttgcacacttcaggttccatgaagattgaaaaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0728900, RefSeq:Os03g0728900