Difference between revisions of "Os03g0827500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0827500| Description = SPX, N-terminal domain containing protein| Version = NM_001058306.1 GI:115456340 GeneID:4334647| Length = 2715 bp| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0827500|
 
GeneName = Os03g0827500|

Revision as of 19:46, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0827500

Description

SPX, N-terminal domain containing protein

Version

NM_001058306.1 GI:115456340 GeneID:4334647

Length

2715 bp

Definition

Oryza sativa Japonica Group Os03g0827500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35606786..35609500

Sequence Coding Region

35606864..35606960,35607090..35607145,35608536..35608695,35608784..35609304

Expression

GEO Profiles:Os03g0827500

Genome Context

<gbrowseImage1> name=NC_008396:35606786..35609500 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35606786..35609500 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaattcgggaaggatttcaggagccacctggaggagacgctgccggcgtggagggacaagtatctggcgtacaagtccctcaagaagctaatcaagaagctcaacgacttctacatcgagagggaggagtggtacgtcatccgcctccaggtgctcaaagaaagaattgaacgtgtcaaagctaagaagaatggggcttttacatctaagagcgaattcactgaagagatgttagagatacgcaaagcttttgtcatcatccatggggagatgattcttctgcaaacctatagctccctaaattttgccggacttgtgaagatactgaaaaaatatgacaagagaacaggtggtttgctcagcctacctttcactcaacgtgctcgacaccaaccatttttcacaacggaacctttaacaaggcttgttcgagaatgtgaggctaatcttgagctcctgtttcctatcgaagcagaagtacttgagtctgctagctcctctgctaagttgcaacctcagaatgatgatgcggctagccatgacccagcgtcatctgtcgatgttgaaacctcggacgtgtaccgaagcacactcgcggcaatgaaggcgattcagggcctccgcaaagccagctctacttacaatcccttgtcgctcgccaggttcttccatggagaggacggtgaagcctgctctggagccatcacctctgaaagtgattcctattctgattcccagattgaagatgctgaagatgatgataaagaggtgcaatcaagggagcagaatacggctcaaaatgctgcagaaggccagccacgtgatgaatga</cdnaseq>

Protein Sequence

<aaseq>MKFGKDFRSHLEETLPAWRDKYLAYKSLKKLIKKLNDFYIEREE WYVIRLQVLKERIERVKAKKNGAFTSKSEFTEEMLEIRKAFVIIHGEMILLQTYSSLN FAGLVKILKKYDKRTGGLLSLPFTQRARHQPFFTTEPLTRLVRECEANLELLFPIEAE VLESASSSAKLQPQNDDAASHDPASSVDVETSDVYRSTLAAMKAIQGLRKASSTYNPL SLARFFHGEDGEACSGAITSESDSYSDSQIEDAEDDDKEVQSREQNTAQNAAEGQPRD E</aaseq>

Gene Sequence

<dnaseqindica>79..175#305..360#1751..1910#1999..2519#atccaacccactccgagccagattaagggagaagagatttcctgcgaattcttcgaggaattctgttccaaatcgagtatgaaattcgggaaggatttcaggagccacctggaggagacgctgccggcgtggagggacaagtatctggcgtacaagtccctcaagaagctaatcaagaacctgccccccgatggagatccccctcccgtcgccgcggcggcggaggtgcctgcgggagatggggatggggatgggggcatcgccctggggaactggttcgccagggtcctcgacatggagctccagaagctcaacgacttctacatcgagagggaggagtggtacgtcatccgcctccaggtgcgctcttgttcttcttcgatgagctcttctcgtttctgcgtttttttccctatataaatgcgtgaagtcatgcccgatgcgggaacagtggaccggtaatttgtggggggagattttttttagataatggaatgaaatagcatcctggcctttactcaaaagagctacagcccaattattatggggagatgaagtagatgttcttgatgtcaaaacttttaattgcggatcgcatccaattggttacctatgtactcctatgtggattgatcttggacagattcccaattcccagatgatttagtattaatttcggcctgtgcaggcgatctatgcagtaatggttgaattatgagtgttaaatgaacatatgtgaagcatcaatagtattgttatgcagtggtacaagaagaagctaaacattcctgcaattctatgactgagtactgcctcagtaaacagtattgtggtcaagacatcaagtcatacacctactaagtgcacgcaatatgccccatcacaaagtttttcttcttccaagaaaaatgagtagttgtacttgatgtcttttttctcctacagaaatgactttagttgaagtcatgattgaggtatgcagggaagaaaaggattagaaactgtagcgaatgcacgaaacttgacatcaggaaatgcagatatatgtggtttgtgtctttgtgatactgctgtgttagtgtggtattaacaccatgacactcaaacgatgatatgtgttatgcaaacaacaagtacacttggctttgcaaaataatcatatcctgccatgatgagctagatttaccttttcatttttgtggatcatccaagcacaattgattgagcaattagattgtttaacatactaggatgtacttctaccctccaaacttgtgaacttgtgtataccaagtgtttagtacctgaacagcctctttttgtgcttcaattcatcaagttctgatcattcgaaagcatctgcatcattattctatcatgagggcccatcgttaaatggcagatggtattatggtcttggacacattaatggcaaagaagtagaaaggtttttggagataaacagtcttaagaaacatttgacgccttaaagggaaggttgtacaaatagcatgaattaccacctttcaatcagcagctgaagataaaatctaaatcttcctagttcctacatactttagacattctttagattttggcattttgtttcttgattgcttgggtaattttaaggaaccatttagtgagtttgtatcaatttgcttcatgttcttttttctgaatcatcggttgatttatttatctttgtatattccttgagctggaaatgttctaacacttgctgatgaaggtgctcaaagaaagaattgaacgtgtcaaagctaagaagaatggggcttttacatctaagagcgaattcactgaagagatgttagagatacgcaaagcttttgtcatcatccatggggagatgattcttctgcaaacctatagctccctaaattttgccggtgagctcatcaaaccaagttggctagtttgaagtatgttatcagtagtatacttctcatgcaatgccttgatattgtgtgcattcaggacttgtgaagatactgaaaaaatatgacaagagaacaggtggtttgctcagcctacctttcactcaacgtgctcgacaccaaccatttttcacaacggaacctttaacaaggcttgttcgagaatgtgaggctaatcttgagctcctgtttcctatcgaagcagaagtacttgagtctgctagctcctctgctaagttgcaacctcagaatgatgatgcggctagccatgacccagcgtcatctgtcgatgttgaaacctcggacgtgtaccgaagcacactcgcggcaatgaaggcgattcagggcctccgcaaagccagctctacttacaatcccttgtcgctcgccaggttcttccatggagaggacggtgaagcctgctctggagccatcacctctgaaagtgattcctattctgattcccagattgaagatgctgaagatgatgataaagaggtgcaatcaagggagcagaatacggctcaaaatgctgcagaaggccagccacgtgatgaatgatccgtctttgcattgtgctgtttaatcctccgaggccctgataagtgtaaatgatacagctgcggcatacactaataatcttgatccttgaaatgtataaccattactgatcttcccaatggaactcttttcctttttcttttcgctcgtagatatcaaagttggatttatatttactgtgttctttggtttgaca</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0827500, RefSeq:Os03g0827500