Difference between revisions of "Os04g0102700"

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(Created page with "{{JaponicaGene| GeneName = Os04g0102700| Description = Similar to N-acylethanolamine amidohydrolase| Version = NM_001058531.1 GI:115456791 GeneID:4334893| Length = 9073 bp...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0102700|
 
GeneName = Os04g0102700|

Revision as of 19:47, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0102700

Description

Similar to N-acylethanolamine amidohydrolase

Version

NM_001058531.1 GI:115456791 GeneID:4334893

Length

9073 bp

Definition

Oryza sativa Japonica Group Os04g0102700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:178475..187547

Sequence Coding Region

178615..178674,179187..179282,179540..179601,180217..180281,181048..181116
,181307..181399,181525..181628,182106..182189,182259..182339
,182865..182916,183084..183155,183447..183522,183604..183716
,184092..184239,184331..184408,184547..184676,184769..184959
,187075..187135,187237..187428

Expression

GEO Profiles:Os04g0102700

Genome Context

<gbrowseImage1> name=NC_008397:178475..187547 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:178475..187547 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaagccgccgcgcgccatgacgccggtggaggaggtggacctgtcggcggtgaggtaccagtcgccgtcgctgcaggcgccgcacctcaccggcttctctctcagggccttcgtctggctcatggagtcgcccctattcggccgcctcctcacctccgtcctcaagtcgcagaacaacatcacaaggatgctgcaggacacggtgatccccgagcgccccatgtacctccccgagtacccgccgcaggagccggagcaaggagttttgcttctgggggatgacagggaccctgtggacagagttgaggaagcacttcactgcctcccgccctatgatccgtctctgcgttggccggccggggacaaaccccctttcctctactggaagatccgtgattttgcgcatgcgtaccgctccgggatcacaaccccgtctgttgttgcggagcatatcattgccggtgtggaagagtggagcaacaagaagcctcccatgcctatgttggtttattttaacgcagatgatctaaggaaacaagctgaagcttccacaaagagatttcagcaaggaaacccaatttccatcttggacgggatctttatcgccattaaggatgacattgactgcttcccatatccatcaaagggtgctactacatttttcgacaaaattcgctctgtggagaaagacgcagtttgtgttgctcgtttgcggaaatgtggagtgttattcattgggaaagctaatatgcatgagctaggccttggagtaactggaaacaatccaaactatggaacagcaagaaatccacattcaattgatagatatactggtggttcttcatcaggtccagctgcactagtctcatcagggttatgctcagcagcaattggaacagatggtggaggttctgttaggataccatcttctctatgtggcattattggtttgaagacaacctacggacggacagatatgactggggcactttgtgattgtgggaccgttgaagttgcttctcctctagcagcttcagtggaggatgctttgctagtgtattctgcaatagcaggctctaggcctatggataagcttaccctgagaccatcaccgctctgtgtccctaatttggtgtctcctgacaacaacaatatactgggatcggtgaaaataggaaaatatactgagtggtttcatgatgtctccgatcgtgatatctctaatacatgtgaggatgcacttaaccttctttgcagcagcttcggatgtcaaatagaagaaataatactgccagaacttgaggagatgcgtactgcccatgttgtctcaattggcacagaatcattctgtgatttgaatcctcattacagagcaggaaaacgaactgaatttacgttagacactcgaacaagtttggcactttttggatcattcacttcgactgactatgttgcttctcaacgaataaggagaaggataatgtactatcacaatgaagctttcaagaaggttgatgtcatagcaactcctacaactggcatcactgctccagaaataccacaaagttctctgaagttaggagagtccaattacgttgtgtcagcttacctgatgcgattcgtgatagctggcaatcttcttggtttgcccgcgataactgtacctgttggtcatgataagcaagggcttcctataggcttgcaactgataggtcgaccatggggcgaggctagcttattaagggtggcttctgcaatcgaggagctctgtctgcagaagcggaaacggccatctgcatttcatgacatcctgaacgcttga</cdnaseq>

Protein Sequence

<aaseq>MGKPPRAMTPVEEVDLSAVRYQSPSLQAPHLTGFSLRAFVWLME SPLFGRLLTSVLKSQNNITRMLQDTVIPERPMYLPEYPPQEPEQGVLLLGDDRDPVDR VEEALHCLPPYDPSLRWPAGDKPPFLYWKIRDFAHAYRSGITTPSVVAEHIIAGVEEW SNKKPPMPMLVYFNADDLRKQAEASTKRFQQGNPISILDGIFIAIKDDIDCFPYPSKG ATTFFDKIRSVEKDAVCVARLRKCGVLFIGKANMHELGLGVTGNNPNYGTARNPHSID RYTGGSSSGPAALVSSGLCSAAIGTDGGGSVRIPSSLCGIIGLKTTYGRTDMTGALCD CGTVEVASPLAASVEDALLVYSAIAGSRPMDKLTLRPSPLCVPNLVSPDNNNILGSVK IGKYTEWFHDVSDRDISNTCEDALNLLCSSFGCQIEEIILPELEEMRTAHVVSIGTES FCDLNPHYRAGKRTEFTLDTRTSLALFGSFTSTDYVASQRIRRRIMYYHNEAFKKVDV IATPTTGITAPEIPQSSLKLGESNYVVSAYLMRFVIAGNLLGLPAITVPVGHDKQGLP IGLQLIGRPWGEASLLRVASAIEELCLQKRKRPSAFHDILNA</aaseq>

Gene Sequence

<dnaseqindica>8874..8933#8266..8361#7947..8008#7267..7331#6432..6500#6149..6241#5920..6023#5359..5442#5209..5289#4632..4683#4393..4464#4026..4101#3832..3944#3309..3456#3140..3217#2872..3001#2589..2779#413..473#120..311#ccgccgccttcttcgcctactcttcttcttcttccacctccactccattcctccacctccacccacactagccactagactactagagctgtgggtgtagtagctaagaatcaagatcgatggggaagccgccgcgcgccatgacgccggtggaggaggtggacctgtcggcggtgaggtaccagtcgccgtcgctgcaggcgccgcacctcaccggcttctctctcagggccttcgtctggctcatggagtcgcccctattcggccgcctcctcacctccgtcctcaagtcgcagaacaacatcacaagggtacgttgggtattagctttgcctaattaaatttgctactatgctaataatgaattgatggtgatgaatttttggtgtttgatgcactgcacgcaccgcagatgctgcaggacacggtgatccccgagcgccccatgtacctccccgagtacccgccgcagggtatgcctagtatactatatcccaccttccatagcattcccaatttcatattcctttccttcctgcttcactttattacccaaacattctcatcatcaaatagttattatactaaatgtccggtatcgctaatcctagttcgagcgccgcacaatgctccctcgttcgttttttcgttttttttaccaccccaccttctgtgtttcttttttctcttttccatcttatctgtgcttcatcaaaggacccggtaaaatattaaccatccgtttagtttttctttccaagttcatttttctaatgtttcacaacgttttaaaagtaacgaatttactttgtggagtttttcaaaagtaacgaatttactcgcatgaatgcccctttcaaaagtaacaaatttacttgcacaaatgccctcacattgtatgtgcatcattcctagatggtcgtaaaagaatacctaacaaatttacttgcacgaatgccctcacattgtacgtgcatcattcctagatgatcgtaaaagaataccagtgttataaatattatttagatttcgtggtctgcgactaaaataattaccaccgtcctctcaatatagcccatgatctcgtagccaccatgtagtaatatgtttactaatgtgtttaatacacagtataagggtaaaaactgaggcttcgtggtctgcgagtaaaacaattaccaccctctctctatatagcccatgatctcgtatccactatgtagtaatatgtttactggtgtgttcaatatacagtataaaaagtaaaaactgatactaagagtattgttagtctgtatcacaaaatggccgtacgaatgaaaaaaattacaggctcaatcacacacaagtgataagattactcacaggtgaatcaaactagaaaagaaaaaaaaagattcatccaaaaatccatcgtgaaactacatcctggtggctttgctggatcttgctataaggatggagaggctggtctgtgtcttgtgactggtagtggagagagcaaccgagtggcgaacggtacgcgacgatggaatcaagggaggatgtagcagcatggtatagagatgggctcgacgttgcgcagtagcagccatccatcatctagcaagcgcaaaaaaaaagcaaaaacattattgttcatgtcatagagacgacgagcaaatgaaaaatagcaaacaacctccatcactggcggactccaccttgtcctgcggccagccacatggagcacgatgtgcaaatgtaggatctgtgcagaccatcaattcagatcaggtaatattgcagattacacgttaatttgatttgcaaaaagaaattggggcttcatacgtgaagttgaaggagagtatgcagatgcaaatcggagtgtcatttccatacttgcttgttctatcaacgtcgccgatgtggagcagccgccggttgttgctcttgacccaggtgaacacctccttgccgattaagctgtgccttcgcctcaaccgccgccggtcaccgccgtcaaccgccacggtgtcgtcatcctcgtccatggtgtgttaccgatctgtaggctaggatggtggatcgattcagattcgaagaaaaaaagaaaaaatgaagtgggggcaagagtggttggttgggtacgggaaaaatagaatatataccagaagcagagaagttgtttttatcgcagtaaatcattaactccgataatagtgggagcaggatgacgggacgtggggtgggatcgaaagcagggaagttgtttttattatcgaagtaaatcgtttactccgataacggtgggagtgggatgacgggacgtggggtgaggtgggcctggactaatacatgtttggcgctcggaatactaggaacgtgctgcgctcctaattgtagtactattaaatgtcttacaaaaaacaaacaaaagatttgctcctttaagtaccatcaaacatcaaacatgctgctgcaaaaccacaccttaaaccctctgcccctgtctattttccttgcaatccatttgttttcttacccatattttttgtacactactgctgtggtgctcacatttggaactggtgctgctttgccagagccggagcaaggagttttgcttctgggggatgacagggaccctgtggacagagttgaggaagcacttcactgcctcccgccctatgatccgtctctgcgttggccggccggggacaaaccccctttcctctactggaagatccgtgattttgcgcatgcgtaccgctccgggatcacaaccccgtctgttgtcagtagccccattggattgaacaaatcattattttcttctctgcctcccctcctgcatgtgtgccacttgactttcttcttgttgcataggttgcggagcatatcattgccggtgtggaagagtggagcaacaagaagcctcccatgcctatgttggtttattttaacgcagatgatctaaggaaacaagctgaagcttccacaaagagatttcagcaaggttttcccttctctaaaatcatgatatttttgtattgttgacttttttatatatatatttgggttaaatactttcaaattgaaactccaccatattctatctcatcttcttgacatgtgatggtgctccttggctcaggaaacccaatttccatcttggacgggatctttatcgccattaaggatgacattgactgcttcccatatccatcaaagggttagttaacagactgaaggggcctggcaatttggttgctgtatctgagaagcgtattccaacttataccttttttttaaaaaaaatacaggtgctactacatttttcgacaaaattcgctctgtggagaaagacgcagtttgtgttgctcgtttgcggaaatgtggagtgttattcattgggaaagctaatatgcatgagctaggccttggagtaactggaaacaatccaaactatgggtatgcattatcatcatgtgactgcttattttgttcagatcccttagctagtatctagggagcacctgacggtttgtgtggtcacaaatgagaaatatcaacaacattttcaaggccaaacagactgtattattttattagctgtttcctagaatcaaattaaattgagcattagtaaatctagttgactaaccaaagtactgggatgaaaataaatattttgagctatatcagtcacatccaaatctaacacatttttttaaaagattaggaattcaaaattttgatccaatcttaagtgatagtccaatttactgttttctgatgcctagtgtagtgcttaaccatcttgtttcttaacctttccatttgcagaacagcaagaaatccacattcaattgatagatatactggtggttcttcatcaggtccagctgcactagtctcatcagggttatgctcagcagcaattggaacagatggtggaggtctgtacataagcttcattgcccctagattcttgtgttgtctgtactagtctccagctactactttttttactgtgacaggttctgttaggataccatcttctctatgtggcattattggtttgaagacaacctacggacggacagatatgactgggtaactaaaagaagttagaattcacttaatatttactgtagtaactcctttgagcatcataattcaaatcgattataaatttataatagatttcaacatcacatctatagacgatatagccctctgctaacattccagaagttctgaaactgttttctattatggaagttattaaaaacaatgaaataaaggacgagttgtttttttatggctatcctacacctgatcatattacaatatatttacatgcatcctattagaagtatgtgtaattagagattctgctttcagggcactttgtgattgtgggaccgttgaagttgcttctcctctagcagcttcagtggaggatgctttgctagtgtaagctatttaccttgctagagagatcatgagatctgagatcatttgcacaagtctgttaggcttacgtttcttgccaattaagcgtgaagtttgtcgacactatttttccatgatataaatgatcttgtaagcttgactgtcatcttaatgaactgacttttcaggtattctgcaatagcaggctctaggcctatggataagcttaccctgagaccagtaagatatttatgatgtacttttttcatcttcctgttaaataccacaacctactaataaattggataggtaacacgataattgactgcaaaacagagaattgtggctggctggttcattcttccttgggccatatgaccagctgcccagtcatagcatctaggcagtttgctacttcctccgtttcatattataaaactttctagcattactcacattcatatatatgttaatgaatctagacatatatgtgtgcctagattcattaacatctatatgaatgtcttataacctgaaacggaggtagtattttttatatgaggggacaatattgtctgtttactgattgatatagcatactgcaatgttttattttttttaaaaaagttaaatgttaaatctacatcgtaatacagccaaatgtttagcttcttaattgtcccctggaattcacatttgatatcgatcttaaagcaacctgtcaagctcacatcttctgcatttctttccatttcctctctacagtcaccgctctgtgtccctaatttggtgtctcctgacaacaacaatatactgggatcggtgaaaataggaaaatatactgaggtaaacttttcacatcaagcatcattttggtatgcatgagcctgttctaaattacactggtttttgtagtggtttcatgatgtctccgatcgtgatatctctaatacatgtgaggatgcacttaaccttctttgcagcagcttcggatgtcaagtaagatcatcactatctaacataccttagacaataggagtacagtattctactagttaattatcacagtttatatatagcagcaacaataggcctttgcttttggttgtgcaatttcttctattaatggcaacatgttttattgtgtggttttctgttttttccttactgatgtgacattccaatgtgtacagatatttctatgtgcatcaattgcattatcgataatggatatgttgaaataactgtgaaatataaatgatatgtttattttttaaattctgtaaatcataattggtttataattgattactgagctgctttatctggagcttttaggaagctaatgagttgtatgagttacgcttaaactttttccagctacgaaatgtttgaatgagagccaattataatgatgtgttcctgtaaaaattttctgtcatgtaagttgataagattttatttatgtgtttaaagatagaagaaataatactgccagaacttgaggagatgcgtactgcccatgttgtctcaattggcacagaatcattctgtgatttgaatcctcattacagagcagggtacacatctattttaatgaatatcatattctacatgttgttctgagatataatttttgaaatttccttcaggaaatagtgtgtttgctgttctgtagtaatgatcttctgctaatttcctccagaaaacgaactgaatttacgttagacactcgaacaagtttggcactttttggatcattcacttcgactgactatgttgcttctcaacgaataaggtgagtaaagggtatacattcagctgatgcatagatttttctatttctgatgcaatttagtctaaagcataaatcatatgctgctgacctattattgaagtgagcaccaggggatgctgatttttgtgctatcttattcttcttgtatgatgtctcctatattgtgctaaatgtaacggggcatgtttaggagaaggataatgtactatcacaatgaagctttcaagaaggttgatgtcatagcaactcctacaactgggtaataaatccacaaatttcatcataatcaatctgtacatcttaccacttgctcttactaatttgatgcatacttcctcctccatctattatcttttgcttactcaagcaggccagtgcacaatggaagtttgtagttttcagtcacaagtatttctaagcaatgtccatttgacaattttctgatagttgtggcaaacaccatttggacgatcatgttttggaaaatgaaaactgcgttaatcctgagtctcgattcctggacatgaacactgtgtcagttcatctgcctcatcatgttgaagagtttaacctgctgttacctgttattagtcttacgattcaaagattgatcaatgttcttatgctcatgcacaatgacaaccctaattgtgaaaagtagaatgtagaagatatctagtgtgtctggaaggactttaaactttcttatatcaaatcaagttcttacagtaatgcaaatggtctggctttgtgttgtggataaatggttgacctggtattttctacattaaatgaacattatgttatatatctgagaattgccctgtggcaatacagttcagaatggactggaatagttaaaattaactaatctgtaagtatttgtctatactccatagcacatagatgatgcatctcttgtctactggtaatactgcattctagaacttttacatattttgcctttttagcgagatgtattttctgttgctaaaacagctaaggaaattttgttgtttctccagcatcactgctccagaaataccacaaagttctctgaagttaggagagtccaattacgttgtgtcaggtaaacagtttggaggacattttctcttggtatcttcattagctattttgcctgtttacctgtgcgaaatcatagcttttaagttgagaaaaccagaaatcaggacgcgtcaattgttatttgatcatgtcatgtttctattttgcattatatgatgcctgtataggggcaggtttggtaaggtggcaagccaaacactccatcaaaaccttatttaccaaaattttgggaatgtccatgtactcgtcttgtattatcaaaattttggcactaagcacaaaaaaaggccttctctacctcttccaaataatcctagggtggagaacctaaccgttctataagtcgttcagtttgaacaaggaaaattttgtagggaggcttcttattctttgtagcaggaatcatgtaaacaaggaatctttgttcctgtctggattgatatacaacttagttacacaacttagaagtaacaagtccatcatctttcatctataagtgacttgaattaaagtgcatatgtatgcctgttttgatgctaactacaaatttggctattttcttctgtatatagaccatgcaaaactttttttgtctgacaccgccgcttcattgcagcttacctgatgcgattcgtgatagctggcaatcttcttggtttgcccgcgataactgtacctgtaagttgtgcaaactcatggttatgttttatgtatgtattgcatctttcctttaaaaacgaagagcatgtactgcatgtttaacttagcattctgcatgaagtgaattttggataagagtgattcataaatattttgcttaaatactgtcattatttccaatagagaagaattttctcagggttggattttttgttcagtaactgaatatctttaaaaggcgcacttgttctatatgttactacttctggactcaggttggtcatgataagcaagggcttcctataggcttgcaactgataggtcgaccatggggcgaggctagcttattaagggtggcttctgcaatcgaggtattgtgcaactacatcataaatattaaatatcgtgtttgggtttctcctgcagcaagtctagattggactgttcttagtatgaatcctgatgaatatctgaacattttcaagacagtccactatatttggccctttcattgcaagtttacctctaattcttgtgaaaacttatatatatttctatagcacttgttactgcaattctgagtagtaccatgaacttagaaagttttctattagtattattattttttatttatcttcttaaattgtcttgtttcattggtgtgccaactgcattttggtattttccaccccattagaatttatttttcagttggaggtgcatttccaatatggcaatataaatacaagtattatgattgtgcattacttggagtattcttcttttaatggtctagccacataatccaaagtccaatagttaaattatctgctgatgctagaagaatcggtgtacagctgacgttggttgtgcctgcttgtaggagctctgtctgcagaagcggaaacggccatctgcatttcatgacatcctgaacgcttgagttgacaaattatgtatccatccatcaatgatgtatggcacttggtgctacgcttttattcagaacatttgtacagtgcagatgattcagtctttcctggtgttggatgtaataaaagtttcccaatggagggctaacgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0102700, RefSeq:Os04g0102700