Difference between revisions of "Os04g0105100"

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(Created page with "{{JaponicaGene| GeneName = Os04g0105100| Description = RINGv domain containing protein| Version = NM_001058541.1 GI:115456811 GeneID:4334905| Length = 3260 bp| Definition...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0105100|
 
GeneName = Os04g0105100|

Revision as of 19:47, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0105100

Description

RINGv domain containing protein

Version

NM_001058541.1 GI:115456811 GeneID:4334905

Length

3260 bp

Definition

Oryza sativa Japonica Group Os04g0105100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:324377..327636

Sequence Coding Region

324458..324481,324906..325301,325402..325582,325817..326108,326425..326497
,326646..326736,326851..326930,327028..327270

Expression

GEO Profiles:Os04g0105100

Genome Context

<gbrowseImage1> name=NC_008397:324377..327636 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:324377..327636 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcagcagctgcacctgcaggggactagtactgctacaactgttccattgcaaggtgaccctgcttctgatcaccacccacatctctcaatcgacataccaccagctgcagcaagcatgtcacctgcaccgacacaagctgctgcagatatcacacccacaccgaccacttcgattttgagcaccaaagcgagcacacctgcaggttcatgttccagcagaagcaccagcgttgccccaaagccgcaacgatcgtcatccttcatgctgaggcagactgtcaagagcctcttgccagtgggaagcttcaagtcgtcagtcaagttcttcaacgccagaatttcgaggacatcgtcgctcccggtgaccgatgtctcgcaggaacaagccgataaaacttcgactactcatgctgttgataaagcaggtcacatgtaccggtcacagtcgcttcccatgaacatgaagaaattgaataatggaaagagcttcaagagaatgaattcactcggcggtgtctaccgcgtagttccttcgacaccatcagtccccgtgacaagcagcaatgtcatcccagatatagtcccatctgaaccaggtgatgaagatggagaggacatagcagaggaagaggcagtatgcaggatctgcatggttgagctgtcagaagggagtgacactctgaagctggagtgttcatgcaagggcgagctcgctctagctcacaagcactgcgccatgaagtggttcaccatgaaaggtaccaggacatgcgaggtctgcaaggaagatgttcagaacctccctgtcacccttgttcgtgttcagagcatgcagcagcctgagcttcagaccaaccctgccaacgcatcaagatacgatcgcctcaggatgtggcagggagcgccaatccttgtgatcgtcagcatcctcgcctacttctgcttcttggaacagctgctggttgcccgtgatggtattgcagcgctggcaatatcgctgcccttctcatgtatccttggcctcttctcatccctcaccacaacaagcatggtggcaaggagatacgtgtggatctatgcgacaattcagtttctgttcgtcgtcttcttcacccatctcttctacagatatctccatttgcaagcggtgatatcaatcatcctggccacgtttgccgggttcggcgtagggatgaccggcaactccatcatcgtggagattatacggtggagggcggcgagggcggcggcggcgccgccggctcaaacccgtcatcgtcgtcgtcgtcatggtcgcaggcaacaacagccaccacctgcacaaccagctgcttcttcagctgccgtcgccgacgttgagaacccacctgtataa</cdnaseq>

Protein Sequence

<aaseq>MDQQLHLQGTSTATTVPLQGDPASDHHPHLSIDIPPAAASMSPA PTQAAADITPTPTTSILSTKASTPAGSCSSRSTSVAPKPQRSSSFMLRQTVKSLLPVG SFKSSVKFFNARISRTSSLPVTDVSQEQADKTSTTHAVDKAGHMYRSQSLPMNMKKLN NGKSFKRMNSLGGVYRVVPSTPSVPVTSSNVIPDIVPSEPGDEDGEDIAEEEAVCRIC MVELSEGSDTLKLECSCKGELALAHKHCAMKWFTMKGTRTCEVCKEDVQNLPVTLVRV QSMQQPELQTNPANASRYDRLRMWQGAPILVIVSILAYFCFLEQLLVARDGIAALAIS LPFSCILGLFSSLTTTSMVARRYVWIYATIQFLFVVFFTHLFYRYLHLQAVISIILAT FAGFGVGMTGNSIIVEIIRWRAARAAAAPPAQTRHRRRRHGRRQQQPPPAQPAASSAA VADVENPPV</aaseq>

Gene Sequence

<dnaseqindica>82..105#530..925#1026..1206#1441..1732#2049..2121#2270..2360#2475..2554#2652..2894#gctcttcattttgcactccagactacaaacaagctagctaggatcaacaacaacaactcaaacaataatctgccgcccgccatggatcagcagctgcacctgcaggtacacacacatacccttcttcatctctctctctctctctctctctctctctctctctctctgcaactcctttctttctttctttcgtctagcttgcatagttgcatggatgctacttcctggtttcttgtttctcttcttacggatttgtgctaatcaatcggtgctgcaacttcacaagtgccactctgcaatcagccatccatgaccgtgatttttctaaataattcttttagctacaaattgtccatgatttcgggattgtttgcccttcaccagtttgagattgattcctcctcataccctaccctaccctctctgctgaatgaaattaatgtaccatcatcttttgattatcacttacctgcatgtgtgctaccttcattaactgaatctttcttatgctccttaatcaatttcgtaggggactagtactgctacaactgttccattgcaaggtgaccctgcttctgatcaccacccacatctctcaatcgacataccaccagctgcagcaagcatgtcacctgcaccgacacaagctgctgcagatatcacacccacaccgaccacttcgattttgagcaccaaagcgagcacacctgcaggttcatgttccagcagaagcaccagcgttgccccaaagccgcaacgatcgtcatccttcatgctgaggcagactgtcaagagcctcttgccagtgggaagcttcaagtcgtcagtcaagttcttcaacgccagaatttcgaggacatcgtcgctcccggtgaccgatgtctcgcaggaacaagccgataaaacttcgactactcatgctgttgtaagcatatataaccaaactcagcttggcaaattctgtatgatcaagagctagtatattatgtttattttgtctgaccgattttgtacctgtggtgcaggataaagcaggtcacatgtaccggtcacagtcgcttcccatgaacatgaagaaattgaataatggaaagagcttcaagagaatgaattcactcggcggtgtctaccgcgtagttccttcgacaccatcagtccccgtgacaagcagcaatgtcatcccagatatagtcccatctgaaccaggtgtgtaccgtccaatatcagttatatataatatagtttcaccccagataaatatggtttgctggttgtatagagaaattttacagtcctctaggtaccacacatcattctagtaaatttttagtacgtacctcatctcggtttaagatgagtacattctcaacgatagtaaaattaccattttctatatatatatatggtgctaacgatgtgagtcgatcaatttgtgtataggtgatgaagatggagaggacatagcagaggaagaggcagtatgcaggatctgcatggttgagctgtcagaagggagtgacactctgaagctggagtgttcatgcaagggcgagctcgctctagctcacaagcactgcgccatgaagtggttcaccatgaaaggtaccaggacatgcgaggtctgcaaggaagatgttcagaacctccctgtcacccttgttcgtgttcagagcatgcagcagcctgagcttcagaccaaccctgccaacgcatcaagatacgatcgcctcaggtaattaattaacttattactagtattaacaattcattccattgatcctgctgttgcttgccagagctttgtagtatttgtcatacagttggtttggtttggttaactacttaatttgatcacaaggacaaggccattagttgtgcatgggatttttctagtagtatattattagggtgacaaattaagacaaaaacaccttttgctggaactagaatgatgtgtgccaatggaatattaacacctagtaaaactgtctgatgcatgaacaacagctgatgttaattaatttgtcatcttgttgctggatgatcaggatgtggcagggagcgccaatccttgtgatcgtcagcatcctcgcctacttctgcttcttggaacagctgctggtacgtgtctctctctcgttgataacactatatacaagtgtactagataacaaattaaaatataaatgtgttctgatttctttcctaattaattaatcaattccctaatgttacatgtgtgtgacatgcatattatatatatctgcaggttgcccgtgatggtattgcagcgctggcaatatcgctgcccttctcatgtatccttggcctcttctcatccctcaccacaacaagcatgggtacgtatgacgacacttattactgttgcatcatcacgcgtgaaagttacttaagtcaataattcagaacaacttaactaattaactgtattctgtgcacgtttgtgagtgtagtggcaaggagatacgtgtggatctatgcgacaattcagtttctgttcgtcgtcttcttcacccatctcttctacagatatgtaagaatcagcatcacaataattaacttgtctagtacagtgacagttaactgcatgcaattagattgcaattaacttgtgaattatatatatgcagctccatttgcaagcggtgatatcaatcatcctggccacgtttgccgggttcggcgtagggatgaccggcaactccatcatcgtggagattatacggtggagggcggcgagggcggcggcggcgccgccggctcaaacccgtcatcgtcgtcgtcgtcatggtcgcaggcaacaacagccaccacctgcacaaccagctgcttcttcagctgccgtcgccgacgttgagaacccacctgtataatactcatcgatcgttacctgaaaggaaggttggaggccttgcaaactgtataaatttatttcaaactaggaagttaagttaataagtaggcatggagttgatttttttgctcaggatcgatgcatggatgcatgtcaattttatactatattttttcagttctttttattttttttggagcttgtgtgaaagaatcagtcttagtatagtatatactagtataaaatgtgtcctggtgtacaaagtatgtcagacatgtatatctgcttgaaatcttgtattagtataaaactcttgagatgctctgctcttggcttgctgaaattgtaaaccatgcatcctccagaaattaatcttcatcttcag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0105100, RefSeq:Os04g0105100