Difference between revisions of "Os04g0105500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0105500| Description = Similar to Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y- 1140 of Kluyveromyces lactis| Versi...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0105500|
 
GeneName = Os04g0105500|

Revision as of 19:47, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0105500

Description

Similar to Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y- 1140 of Kluyveromyces lactis

Version

NM_001058545.2 GI:297602038 GeneID:4334909

Length

4466 bp

Definition

Oryza sativa Japonica Group Os04g0105500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:353557..358022

Sequence Coding Region

357030..357142,357520..357568,357666..357716,357841..357936

Expression

GEO Profiles:Os04g0105500

Genome Context

<gbrowseImage1> name=NC_008397:353557..358022 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:353557..358022 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggcggcggcaagtgggtgcccttcttctccggcaccgatccacgccttcctccaccctccgccaccatctccccctccccgtccccgaccagacgccacctctcgcttccaatcttctgctccgcctcttcacttctcaatctggagaggggggtgatggtgccaccaagcccttcattgctttcgtcttagggggtcccgggagtgggaaaggtacgcaatgtgtccggatcgcttctgattttgggtttgctcatttgagtgctggtgaccttctacggagtgaaatttcaactgggcggtga</cdnaseq>

Protein Sequence

<aaseq>MWRRQVGALLLRHRSTPSSTLRHHLPLPVPDQTPPLASNLLLRL FTSQSGEGGDGATKPFIAFVLGGPGSGKGTQCVRIASDFGFAHLSAGDLLRSEISTGR </aaseq>

Gene Sequence

<dnaseqindica>881..993#455..503#307..357#87..182#gaaggaaaaacttgggaggaggcgaggaagaaccgaagaagcagcagagcagagatcacctgcgattgcgaggggaggaggcagcgatgtggcggcggcaagtgggtgcccttcttctccggcaccgatccacgccttcctccaccctccgccaccatctccccctccccgtccccgaccaggtaactgtatatcccgatccgtcccctctcacgcatttcctcaaaacacctactccgcattgttcgctttctttctttctcctttgttccagtgctggattcattctttctttcttgtgcgcagacgccacctctcgcttccaatcttctgctccgcctcttcacttctcaatctgtgagtgcccactctctccatacgtcttgcagctctgctgcccactgcatgccaatagcacccgcaattaatcctttctttctttctttctttacagggagaggggggtgatggtgccaccaagcccttcattgctttcgtcttaggtacatcttttctctttcctactcttttttttttttgcctcctctcatgatgccatgatgatgatggtcaatgcaacccagccaaattcgttcttgctagagcacattcagaatccttgtctgtagggcctgtttggcagggctccaactcctaaatttaactccaagagctgggtctagagttgagatgcggagcagccttaaccagatctttagtttattttaggagagcactccaacccgctccaatccatttttggatggagctggagctttgctaaacaagaccttagtcctagtcaggccaattgatgttatcagaaagaaagaaatgttgccaattcctcatcctcacatcaacatcctgctgcatgtagggggtcccgggagtgggaaaggtacgcaatgtgtccggatcgcttctgattttgggtttgctcatttgagtgctggtgaccttctacggagtgaaatttcaactgggcggtgagaaagggtaatattgctttgtcatctagtagtaattgtttcattatgcactagatccaacatactagtgcgctggtttttactcaatcaaatggccatgctgcatttcagggagttgatcttaaatataataaaagaagggaagattgttccatcagagattactgttgaactgattagaaaagctatggaatcgagcgatgctaaaagggttcttattgatggtttcccaaggtgtgaggaaaacaggatcgcctttgaaagaatagtaagttctgtttcactattgctttacagacatcgggtttccaattaattcaaatagttcaaagggatttacatccaggagtcccatcagttctttcctccaacctttcggaaggatgcatatgcaactcttgttcttttcatacaaagcaaatgaaggaataagtatgtgatgcttcacaatgatgtgttttacaggtccattgaaatagtggccagtcaatgtgaatgccttgcatcatctagtaatggtatcattatttttttcacttggttgcattgcatgacaacctaagaagacctagcacattaattgagatgtgttaatcatcgcccattcattgatttgatttctataatgctactcaaataaatggtttttgcattattcctgttctcatatgttgatgaattacttttctgaaaaatttcagactggaacagaaccagaccttgtgattttctttgactgccctgaggatgagatggttaaacgtttactaggccgtaaccaggttggcatcagtacttcctattctagcttctgggctaaattgcactagatatgtaactgtacttaacaaacatataatattaatggtatgctccatctttccttctttctcctgctggaattgatttgcatacatagaacatttttttttaggataacgcatgacactgcttatttccttctcacaaataagagtttcttctttgaatttaagaaaagaaatactaacgttgtttcttttctaaattaaggctcataaaacacacataaatctaaattacaggctaatgattgcaaatctgtcaagtgatgccattaatgtaatgtgtttactctaaattatatggaatccctggttttttcttctgtttatcttttttcacatgtatgccttttagggacgagtggatgataacattgaaacaatcaagaagcgcctaaaggtgtttgagagtctaaatattcctgttgttgactactacacttcaagaggaaaggttcacaaggtaatctgtctgtttgttttgcatgtagtttcccagatggtatttagttcttttactttttgattaccctgccttcttccctttgctccaaaatttgacctgtaaagattcataatattgggctttaaatacaattgtctgaattgccaatattcagaaacaaattataaatgatgggatatgcccattctcagaaattctgataggatgcattttccttgtatgtgcactgatatagtggtaagacttcgattttctatgatgtgggtgaaagatagtgaggttagtgattgatttgaggatagtgagtgattttacctggtagattagagccgtggcttattccagttattttcttcagaaagttatacaaacaaggattatctctagaaattgtttccactctatatcattgttaagacatggaggtaatcaaagaatactttttgaatgacatgtagataaatgcaaccggaactgaagaagaaatctttggagcagtccacaagctgttttcctccttaaggtaaatcggctgtttgacatgtgaaatctttgcgacataattttttaaggcaccacatatatggtggatctgggtgtatgcattgcattttacactgtgcgtgctcctcctggagggactgcattcttagagcaggtttaatagtatagccagcaacgggctacagaaactccaactcagcaaaaaaaaatattttctcacagtctattctctctcattgagggcattgggaagcgtgcaaatggtgggaaaagtttgcatctgcagcatgcatggacgacgattggtcatgatgctttttctacagctgcagcccggcgatagattaagcgccggctactctctctctcctgttttctcactcttccatgtaggatttatcttagatgaatagtactaccgcctgctgactgtaacctattatacctgctcttatgctacccaattgcttattggttattctctagtaccaaactggctctgtatgcttgccagttgccgtgtacttaggatattttaatcctacgagtcaaactactctctatatgcctccttgtttacaggtcaataaattgagagatgctaccaagttgttttcaagcaacattttgtcatatattaaagctctcaattatgtctaggctgatggggtgggggatggaccatacaaattgttgcttgtaggtagaaagagctcgacttttatgattctgtgccttttgtgttgatccttttcaataagacatgctcacaagcaaaaatgaacaaaccacaaatatcttcactcttttggtcctgatggcaacatcagcataagaaaaggactaggtgctactttatgtttttgttgactcattgaacttctgcttaaagctaaatcattgactcatgtaattaataacagtaacacttgcaggccccaacttcagaatacagggacaatttgctattataatataaagacaagttccaatcatttggcaaacatgtactccctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccattcgtcttattcaaaaaaaatttgtgaaatatgtgaaactatatgtgtacatgaaagtatatttaacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttgaataagacgaatggtcaaacacgtacttaaaaagtcagcgatgtcaaatattttgaaatggagggagtagcacgaatctcctatgtagcttgctaagtttcagcaggggaaaaaatcattttgatgtaaatattagcttgagcatatcctgaaccaaagccatgaacaacagaagtttgctcttttctgcaggttttgagacttttgtcttccacataagcaggggcctttggctggaaggacatcttgtaggaagacccactttgtctagcatccaaaagttctctctatttctctcgtgttcttttggaagcctcacgtctttattaaaaccattgtatatatgtttcactattatgaatgccacctggtaatggctggtgctgaccttcacgttatccttgtcatgccacagcatgaagaagcatgaacaatagtatgctattgttgcacagtgctgtaacgcattttggtcacaataatcctacaaaccttttgct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0105500, RefSeq:Os04g0105500