Difference between revisions of "Os04g0117300"

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(Created page with "{{JaponicaGene| GeneName = Os04g0117300| Description = SEC7-like domain containing protein| Version = NM_001058587.1 GI:115456903 GeneID:4334954| Length = 2650 bp| Defini...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0117300|
 
GeneName = Os04g0117300|

Revision as of 19:47, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0117300

Description

SEC7-like domain containing protein

Version

NM_001058587.1 GI:115456903 GeneID:4334954

Length

2650 bp

Definition

Oryza sativa Japonica Group Os04g0117300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1008798..1011447

Sequence Coding Region

1009128..1009132,1009236..1011255

Expression

GEO Profiles:Os04g0117300

Genome Context

<gbrowseImage1> name=NC_008397:1008798..1011447 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:1008798..1011447 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>actcacgggttggccggcttgcatccttacccacaggtgaagaaaaagatgtcggaggacgacttcatccgcaacaaccgtgccatcaacgccggcaaggacctccccagggagtacctctccgagctcttccactccatctccggcaacgccatcaccgtcttcagccaggcctccgccgccgccgagatgacgcccaccagatgggccgacctcgtcaagcgctcccgcgccatcgaccccttcaccccctgcgacttcaagcacaagctcacccgcgaggtgttcgtcaccgtctccggccccgccgtcgccaccctcgccgccatcttcgactacaccgacgacgaggacatcctcaaccagtgcgtcgagggcctcatctccgtcgcccggatcgcgcgctacggcctcgaggacgtcctcgacgagctcctctgctgcctctgcaagttcaccacgctgctcaacccctacgccaccaccgaggagacgctcttcaccttcagcaatgagctcaagcccaggatggccacgctcgcgctcttcaccatcaccaaccgcttcggcgagtcggtgcgcggcgcgtggaagaacgtcgtcgactgcctgctcaagctcaagcgcctcaagctgctgccgccgtcgctggtcgaccaggagggcggcgccggcgccgccgtgagcacggagcggctgggacaccgggccaagtcggagtccggcgtcatcttcccgtcgtcgcaccgtggcgccgggacgagcaggcacgtgtccggcatgatcgggcggttctcgcagttcctgtcgctggacgccggcggcgagtcgctgctgtcggtggggagcgagttcgagaacaacctcaagatcatccagcaatgccggatcgggagcatcttcacggagagcgggaagctgccggacgagtcggtgcagaacctggggcgggcgctcatcttcgccgccggcggcaaggggcagaagttcagcacgccggtggaggaggaggagacggtgggcttctgctgggacctcatcgcggtcgtctcgtcggcgaacgtgcaccgcttcaccacgttctggccgcagctgcacgactgcttcgccgccgtgtcccagctgccgctcttctcgccgtgcccgttcgccgagaaggcgatcgtggcgctgttcagggtcgccgtgaggctgctctccggcggcggcggggaccggatggcggaggagctggtgttcaagtcgatcaacctgatgtggaagctggacaaggagatcctggacacctgctgcgaaggcatctcggagtgcatcgtgaagctgctgatggagtacgccagcaacgtgcagacgccgatcgggtggaagacggtgcttcacctgctgtccgtcaccgggcggcacccggagacgttcgaccagtcggtggccgccatgatcaagctcatgaacgacggcgcgcaggtggtgacgcggttcaactacgcggcgtgcatcgaggccgccttcgggttcgcggcgctcaagatcagcccgctcgacatcagcaccaggatcctccagctcatggccgactccgtcaactggctcattttatggcacaagtccggctactccgacccgggcaacgcctggagcagctcaagctcgtcgtcgtcggcggcggcgatgatgatgatggaggacgcgtcgcggatgggcaacctggcgacgagcatgttcatcaagctcgcggaggcgctgcgcaagacgagcctagtccggcgagaggagatacggaaccaggcggtggcggagctgggccgagcgttcgccctggccgccgccggcgagctcgagctgggcccgacggggtcgctggcgtgcttcaacctggtcatcttcgccatggtggacgacctgcacgagaagacgctggagtactcgaggagggagggggcggagagggagacccggagcatggaggggacgctggcggcggcgacggagctgctcgccgacgtgttcgtgctgttcctggcgtga</cdnaseq>

Protein Sequence

<aaseq>THGLAGLHPYPQVKKKMSEDDFIRNNRAINAGKDLPREYLSELF HSISGNAITVFSQASAAAEMTPTRWADLVKRSRAIDPFTPCDFKHKLTREVFVTVSGP AVATLAAIFDYTDDEDILNQCVEGLISVARIARYGLEDVLDELLCCLCKFTTLLNPYA TTEETLFTFSNELKPRMATLALFTITNRFGESVRGAWKNVVDCLLKLKRLKLLPPSLV DQEGGAGAAVSTERLGHRAKSESGVIFPSSHRGAGTSRHVSGMIGRFSQFLSLDAGGE SLLSVGSEFENNLKIIQQCRIGSIFTESGKLPDESVQNLGRALIFAAGGKGQKFSTPV EEEETVGFCWDLIAVVSSANVHRFTTFWPQLHDCFAAVSQLPLFSPCPFAEKAIVALF RVAVRLLSGGGGDRMAEELVFKSINLMWKLDKEILDTCCEGISECIVKLLMEYASNVQ TPIGWKTVLHLLSVTGRHPETFDQSVAAMIKLMNDGAQVVTRFNYAACIEAAFGFAAL KISPLDISTRILQLMADSVNWLILWHKSGYSDPGNAWSSSSSSSSAAAMMMMEDASRM GNLATSMFIKLAEALRKTSLVRREEIRNQAVAELGRAFALAAAGELELGPTGSLACFN LVIFAMVDDLHEKTLEYSRREGAERETRSMEGTLAAATELLADVFVLFLA</aaseq>

Gene Sequence

<dnaseqindica>2316..2320#193..2212#catgctcaacaccgatctccacaacccacaagtaggggtgcaagtgggcttgtccgcaaacccgcttatagacaaaattagtacgatttgaccagcgagttatctattaatttgacatattaatatgtttatggatcgacccacttgtatatctaaatgggtttatcatttatttgacttacttacaagtgaactcacgggttggccggcttgcatccttacccacaggtgaagaaaaagatgtcggaggacgacttcatccgcaacaaccgtgccatcaacgccggcaaggacctccccagggagtacctctccgagctcttccactccatctccggcaacgccatcaccgtcttcagccaggcctccgccgccgccgagatgacgcccaccagatgggccgacctcgtcaagcgctcccgcgccatcgaccccttcaccccctgcgacttcaagcacaagctcacccgcgaggtgttcgtcaccgtctccggccccgccgtcgccaccctcgccgccatcttcgactacaccgacgacgaggacatcctcaaccagtgcgtcgagggcctcatctccgtcgcccggatcgcgcgctacggcctcgaggacgtcctcgacgagctcctctgctgcctctgcaagttcaccacgctgctcaacccctacgccaccaccgaggagacgctcttcaccttcagcaatgagctcaagcccaggatggccacgctcgcgctcttcaccatcaccaaccgcttcggcgagtcggtgcgcggcgcgtggaagaacgtcgtcgactgcctgctcaagctcaagcgcctcaagctgctgccgccgtcgctggtcgaccaggagggcggcgccggcgccgccgtgagcacggagcggctgggacaccgggccaagtcggagtccggcgtcatcttcccgtcgtcgcaccgtggcgccgggacgagcaggcacgtgtccggcatgatcgggcggttctcgcagttcctgtcgctggacgccggcggcgagtcgctgctgtcggtggggagcgagttcgagaacaacctcaagatcatccagcaatgccggatcgggagcatcttcacggagagcgggaagctgccggacgagtcggtgcagaacctggggcgggcgctcatcttcgccgccggcggcaaggggcagaagttcagcacgccggtggaggaggaggagacggtgggcttctgctgggacctcatcgcggtcgtctcgtcggcgaacgtgcaccgcttcaccacgttctggccgcagctgcacgactgcttcgccgccgtgtcccagctgccgctcttctcgccgtgcccgttcgccgagaaggcgatcgtggcgctgttcagggtcgccgtgaggctgctctccggcggcggcggggaccggatggcggaggagctggtgttcaagtcgatcaacctgatgtggaagctggacaaggagatcctggacacctgctgcgaaggcatctcggagtgcatcgtgaagctgctgatggagtacgccagcaacgtgcagacgccgatcgggtggaagacggtgcttcacctgctgtccgtcaccgggcggcacccggagacgttcgaccagtcggtggccgccatgatcaagctcatgaacgacggcgcgcaggtggtgacgcggttcaactacgcggcgtgcatcgaggccgccttcgggttcgcggcgctcaagatcagcccgctcgacatcagcaccaggatcctccagctcatggccgactccgtcaactggctcattttatggcacaagtccggctactccgacccgggcaacgcctggagcagctcaagctcgtcgtcgtcggcggcggcgatgatgatgatggaggacgcgtcgcggatgggcaacctggcgacgagcatgttcatcaagctcgcggaggcgctgcgcaagacgagcctagtccggcgagaggagatacggaaccaggcggtggcggagctgggccgagcgttcgccctggccgccgccggcgagctcgagctgggcccgacggggtcgctggcgtgcttcaacctggtcatcttcgccatggtggacgacctgcacgagaagacgctggagtactcgaggagggagggggcggagagggagacccggagcatggaggggacgctggcggcggcgacggagctgctcgccgacgtgttcgtgctgttcctggggacgctggcgcagggggcggggttcaggacgttctggctgggggtgctccggcggctggacacgtgcatcaagtcggacctggcggcgggcggcggcgccggcgtgatgcaggagctggtgccgaggatgctgaagcggatgatcgtggagatgaaggacaagggggtgctggtcgccatggaaggagacgagctgtgggagatcacccacatccagatccagtggatcgctccagctgtcatggaggagctcttccctgattgattactcacttactcactgcagttaattactagtgttattaagttagaggttactctgataaccaatgtcatatattaaaaaacggagacagtattattgttcagtctttctttttattctaactaggaatgtacacattacctctataaccatctacgaaagactatggctt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0117300, RefSeq:Os04g0117300