Difference between revisions of "Os04g0117600"
(Created page with "{{JaponicaGene|
GeneName = Os04g0117600|
Description = Dihydrouridine synthase, DuS family protein|
Version = NM_001058588.1 GI:115456905 GeneID:4334955|
Length = 6968 bp|...") |
|||
| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0117600| | GeneName = Os04g0117600| | ||
Revision as of 19:47, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os04g0117600 |
|---|---|
| Description |
Dihydrouridine synthase, DuS family protein |
| Version |
NM_001058588.1 GI:115456905 GeneID:4334955 |
| Length |
6968 bp |
| Definition |
Oryza sativa Japonica Group Os04g0117600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:1034034..1041001 |
| Sequence Coding Region |
1034091..1034342,1034996..1035112,1035186..1035416,1038234..1038489,1038585..1038841 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:1034034..1041001 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:1034034..1041001 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccgccaccgccgccgccgccgccgcggcgcctcccgccgacccgccggactcctccccggccgcttcctcccctccgaggcccagcccggaggagctggtcgcccgtgcagtggcccccgtcaagcccgccttcctccgcccgcccctgtccgcgacgccccccaaggatgagggcaaggccaacggcggcggcgcggtggtcgcggagaagaagtccaagcgccagctcaagcgcgagcgcaagcaggaacagaaatcttcatcacatctttgtatcgaagtagggaaaagtggaaatgtgagctcttgcaaatatggtgattcttgccgtttcagccatgacatagatgcctatttggctcagaaaccagctgaccttgagggcacgtgcccatttaccaatctggaccagttgtgtccatatggactaacttgtcgatttttgggtacacataaggacatccatgcagcttctggaaatctttcagagaaacatgagataaatgctttaaacaaagacattcaaaagctcttatggaagaacaaatataagttccccaaggccagtgcacagatcaagcttcttggtcttaaggaagtcattaagagcaaaccggatgctgcaaatgatgataagaaggttaatcatgataatctagacgggaatgatgatgaaaataaagaacctctttgcaatcctcctgtaaatgcggaatgtgattctactttgtgtgaagaattggatagatcagagggagaacctttgattgataactcaattccatgtgttgaaccaaggccaacaaagaagtcaaaggttgaaagtgatgaaattgacaaacatggagcgggtactctcaacactaacacagaatctgaagatcctaatttgagtaatggattggaaccctcaaataactcaagttcttgtagaactgacctaatcacaacacctcatttacgtgaaaagaagataatagattttcgggagaagttgtaccttgctcccttgactactgtcgggaatctgccttttcggagactctgcaaaaccttgggagctgatattacttgtggagaaatggccatgtgcacaaatcttttacagggacaagcttcagagtgggctttgctgcgacggcattcatcagaggatttgtttggggtgcaaatttgtggagcctatccagatacagtagcacgaaccgttgaacttgtggataacgaatgttcagttgatttcatagacataaatatggggtgcccaattgatattgttgtcaacaaaggtgctggatcatcattgctaacaaaacctatgaggatcaaaagtattgtacaagcagcatccactgttactgaaaaacctttaactgttaaggtaagaactgctttctttgagggaaggaaccgtgctgattctatagtttccgacatctatgactggggtgcgtcagccataacagtacatggtcgatcccggcaacagcgctacagcaaacttgctgattgggattatatttaccagtgtgcccagaaagcccctgaccagttgcatgtcgttggaaatggtgatgtattctcttttactgactggaacaaacatgtttcaggctgctctaaaatatcgacaagcatgattgctcgaggtgcactcataaagccttggatatttactgaggttaaagaacaaaggcactgggatattacatctggcgagagattcaatattcttaaagattttgtgagttttggtctggaacactggggttccgattccaaaggtgttgaaacaacacgctattttttactagaatggctaagctacacctgccgctacataccggttggcctgttggatgtgatcccgcaacgtttgaactggaggcccccaagctactgtggccgtgatgatcttgaaaccctaatgatctctgattcagcagctgactggatcaggatctcagagatgttgcttggcaaagttccagaagggtttacgtttacacccaagcacaaatccaatgcttatgatcgagctgaaaacggctaa</cdnaseq> |
| Protein Sequence |
<aaseq>MAATAAAAAAAPPADPPDSSPAASSPPRPSPEELVARAVAPVKP AFLRPPLSATPPKDEGKANGGGAVVAEKKSKRQLKRERKQEQKSSSHLCIEVGKSGNV SSCKYGDSCRFSHDIDAYLAQKPADLEGTCPFTNLDQLCPYGLTCRFLGTHKDIHAAS GNLSEKHEINALNKDIQKLLWKNKYKFPKASAQIKLLGLKEVIKSKPDAANDDKKVNH DNLDGNDDENKEPLCNPPVNAECDSTLCEELDRSEGEPLIDNSIPCVEPRPTKKSKVE SDEIDKHGAGTLNTNTESEDPNLSNGLEPSNNSSSCRTDLITTPHLREKKIIDFREKL YLAPLTTVGNLPFRRLCKTLGADITCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQ ICGAYPDTVARTVELVDNECSVDFIDINMGCPIDIVVNKGAGSSLLTKPMRIKSIVQA ASTVTEKPLTVKVRTAFFEGRNRADSIVSDIYDWGASAITVHGRSRQQRYSKLADWDY IYQCAQKAPDQLHVVGNGDVFSFTDWNKHVSGCSKISTSMIARGALIKPWIFTEVKEQ RHWDITSGERFNILKDFVSFGLEHWGSDSKGVETTRYFLLEWLSYTCRYIPVGLLDVI PQRLNWRPPSYCGRDDLETLMISDSAADWIRISEMLLGKVPEGFTFTPKHKSNAYDRA ENG</aaseq> |
| Gene Sequence |
<dnaseqindica>58..309#963..1079#1153..1383#4201..4456#4552..4808#4979..5251#5618..5899#6046..6166#6352..6521#6614..6712#ccccttaaaaccctcccttgctgctatgcctcattgcctcctcaccgcgccgcaaccatggccgccaccgccgccgccgccgccgcggcgcctcccgccgacccgccggactcctccccggccgcttcctcccctccgaggcccagcccggaggagctggtcgcccgtgcagtggcccccgtcaagcccgccttcctccgcccgcccctgtccgcgacgccccccaaggatgagggcaaggccaacggcggcggcgcggtggtcgcggagaagaagtccaagcgccagctcaagcgcgagcgcaagcaggtatagccgtcgttcgcggtggacgcgaaggtggtttttgcttttaatgctccgggagtgcttgttggaatgctcatgtgcattttttcccctgcatttggatgtcatttctgctgtgtgctgtatctgttccatacaatcttactaagcgaatttgagacatgcatattttgagatcttatagtttgtagtagctatgggaaatgactgttgattcagaatcaagaactacatactgaagatacatgtaatacttaaaaaatccagaagccccataaggaatcagggatttatgttctatttaatttgccatttatgttctatttagggctttgtgctcaccatgcctcttctcatgcttgatcatagtgtaaattagtgctgtttgatattccaatggttttttctggtatctgtgttactccagtactagtaaagactacatgttgagttttgcatcatctttctttcacgaaattgtccagagctgtccctgtttcatacttccagttccatgcaatttgctcgaactttggttataaatgtatgaaattgcaatttgcttgaactttggttgtaaatgtacatgtgcatgatgctttgtaatccactcaatgtgccgatgctcaacaaaattttgttatactgtgcaggaacagaaatcttcatcacatctttgtatcgaagtagggaaaagtggaaatgtgagctcttgcaaatatggtgattcttgccgtttcagccatgacatagatgcctatttggctcaggtactgttttattgtgttgttttccctgaactttcttaggcatgcttatatctttgttattttctgtgcacagaaaccagctgaccttgagggcacgtgcccatttaccaatctggaccagttgtgtccatatggactaacttgtcgatttttgggtacacataaggacatccatgcagcttctggaaatctttcagagaaacatgagataaatgctttaaacaaagacattcaaaagctcttatggaagaacaaatataagttccccaaggccagtgcacagatcaagcttcttggtcttaaggtatataactcccaaattctggttgcgtatctatctgatataccattttctcgtttctgttaatttgctccaatattcgatctgtcgtgcataactcaattttgttggattatggatttactttcatggagttaaatttgaaggttaattggatccatgtcactgcaattttgacaaattaaaaaaatgccactactattcatcatatcggctccatgccactgaaaaattctaaaattggaaccatgccactcccgtcgcttttcccgtcctcctccctcatgccgtcctcatcccgtcgtcgccaccacaccacgtcggcctcgccttctccctgccggcgagggccgccgccgccgctgctcctccccatcctctccccgcacggaccgtgctgccgctgctactcccgctccggagagcaaccagccggaggagagctccagatctggtgccgccggcaccgccgacgaggtccgccgcggctgctcctccccgtcctcgtcgcgcgcaccgtgccgccgctgctactcccgctctggagagcaaccagccagcgagcagcgtcgcggggatccccatctcctcctctagatccgacgccgcgggcaccaccgacgagggccgccgtcgccgccgccgctcttccccatgctcttgtcatcgtcgccgccgcggccatctctggtgagcacctcgggatccccgtctcctccagatacggcgccgccggcatcgccgacgagggccgctgccgctgctcctcccccatgctcttcttgttgtcgcccgcggctcctcggcctcgccaccaagctcaccaacgattcctcctgctccgatctcctccgctgttccccgtcctcgggaacggcagcgctgcgtacctcctccgcggcacgccgccgccgccgccgacgatgacgccccggtgccccgtccacatcaagagctgttcgtcaccggcgcagcgtgttcagggagttccgtgacgcggcaccatctcccgaaacgcccgatgccgacgccaccgacgacgactacctcggggagcttgacttcgaagacgaggatggattcgacgccgactctttccttgccgcagacgtcctgtccagcgccaccatacatccatacataagaagcctcatggtgctcgagtttcgtgttccggcaaggccggctcaacaccggccaagcaatgaagcggcatggcgatgagagtgattggtggatgtgccctgctcaattgccgtgagagaggatgaggaggggaagggaaacgccgtgagagaggagacggaaaaagggacgggagtggcatggtttcaattttagaaatttccagtggcatgtagccaatatgatgaatagtagtggcatttttttaatttatcaaagttgcagtggcatggatccaattaaccctttaaagaaacacggttaccaaatacatatggtagcccttagttctatagccgtgaagaaattatggttgtagataattgtgatgcatctccaatcacaatgtatctctaactagggaaacttgatgcttgaactggcatgggtgctcctttgcagcaaattagtgcattgcacacttgcactgcaaacattctgatgcatcaatgcttgaaatttattctttccacatacaattattgctgaaatttgtaaaactgagttactatgttatttttcagaacaaattatatggtagcaaataataacaattactatcatgtccaacgaatggtgtggaaaaatggaacaccttaagtattatgctttgcatttctaaacttgctctttgtaattgttgatttgtcatggatgaaatatattgtggttgcttcttgtttgaactggtgccaactgcaattcagcgaggactctgagttgtttgtatgctactcctgagtactgttttatgtatctgccaaaaaacattttcgctagtgtcttaataagtgtatatttggtggtggcaaaaacggtagaagatgtgttgtgttgggaagccaatggagcctgtttaatagttaatgaaaagcctggtcgtacttataaatgcatataacagaattgatcatgtactacccctatctatgttttccaggcagatttttgaataatcatgtccatcaatagggcttattttgtatcccaatgcaaaagtgtgttgtttcctctgtatccctaataaatatttatctttaccttgtattctataattcatttgatgtagcacttggatagtgatagaataattagggggcaacctagtcattgtaatgccttcttggtttgtgttcaacatgaaaatattccatgctaagttgtatggatggagtatgctacagctgtttgttaggttattgtgttgcagtatgtgccctctgagcttcagttggctgatttcttgacaaatgagcagagcagagctctgcacaatttcttccttccaccattctgttcctttttatgctccttctgtgttttctatatttggcctggagccctcatgttgaatacaagtgctattcatagcccttttcaatagttagtatttagtattcagcaaatacggataagatcctggaaataattgatttcgtgtgatggcaactgctcacttggtaggtcatagctctcttggtttagatatttcatatcatacaagggcagttcatattgcacttgaattattaggatgtatgtcgatgtatctgctgagacacgaggtgcagtttagaatgttccatttgctaatattgaatttttggggtctatttgatatactttgtaatacaggaagtcattaagagcaaaccggatgctgcaaatgatgataagaaggttaatcatgataatctagacgggaatgatgatgaaaataaagaacctctttgcaatcctcctgtaaatgcggaatgtgattctactttgtgtgaagaattggatagatcagagggagaacctttgattgataactcaattccatgtgttgaaccaaggccaacaaagaagtcaaaggttgaaagtgatgaaattgacaaacatggagcgggtttgttcttgaactttaagattgccattttcaatgcatctattactcttattttgaattgttgtgttgaccttttttggaacattatggtttaggtactctcaacactaacacagaatctgaagatcctaatttgagtaatggattggaaccctcaaataactcaagttcttgtagaactgacctaatcacaacacctcatttacgtgaaaagaagataatagattttcgggagaagttgtaccttgctcccttgactactgtcgggaatctgccttttcggagactctgcaaaaccttgggagctgatattacttgtggagaaatggccatgtgcacaaatcttttacaggttaaaaaactaaataaattacctctgccctgtttcattgcatgcttttcctgtttctgattgcatgtttcttactcctattgcaaaaagttgaaccaaagcaaagttaagttaatatatctgtttgacattcttcatgagacactttattattgatatatttcatgtagggacaagcttcagagtgggctttgctgcgacggcattcatcagaggatttgtttggggtgcaaatttgtggagcctatccagatacagtagcacgaaccgttgaacttgtggataacgaatgttcagttgatttcatagacataaatatggggtgcccaattgatattgttgtcaacaaaggtgctggatcatcattgctaacaaaacctatgaggatcaaaagtattgtacaagcagcatccactgttactgaaaaacctttaactgttaaggtaatggtgcagtagctcagttatactctgttaggagctaattagcacttgaggacaaaagttctggtgatttcatccagatgtcgatctgccaatgcattgtcacatttatggtcaacagggttgaactagaatcagagctttgaaaaaccaaatattttacatgtttagcgtactttttggaaggaaaactatctatgggtggacttagcctgcttgaacattttatgtctcatgatcggtaatcaatgcaaagtttaattagagataaggtacatggggagggggctgctaagacatgtatgacatattaaaatggaaataaacactgctttgctcatattgatctctgttgcttgattccaggtaagaactgctttctttgagggaaggaaccgtgctgattctatagtttccgacatctatgactggggtgcgtcagccataacagtacatggtcgatcccggcaacagcgctacagcaaacttgctgattgggattatatttaccagtgtgcccagaaagcccctgaccagttgcatgtcgttggaaatggtgatgtattctcttttactgactggaacaaacatgtttcaggctgctctaaaatatcgacaagcatgattgctcgaggtgcactcataaaggttagtttggtgctgcagtatatgtactttaacatctatcatgagaaaaatgctataattgctagctgtaatgtcaggcttttgttccctcaagttcatgtctgctaattttgtgctaatgcatggttttttttttcacctgacagccttggatatttactgaggttaaagaacaaaggcactgggatattacatctggcgagagattcaatattcttaaagattttgtgagttttggtctggaacactggggttccgattccaaaggtaggttctctctattgccagatattggctcagattatgagttttgtgaggcctggaatgcgataatatctgctcatcatcgagttacagttttttttttcttgctgcactgaaatgctcggcatgaaatcaaattgattttgaaagggttgtcttgatcatcaaattatcatgtgtattttcaggtgttgaaacaacacgctattttttactagaatggctaagctacacctgccgctacataccggttggcctgttggatgtgatcccgcaacgtttgaactggaggcccccaagctactgtggccgtgatgatcttgaaaccctaatgatctctgattcagcagctgactgggtaagctgtcctcgttctgagtgttggatggtttctatcttttactagctatcacaagctgataatatatatcttgtctaatgtacgtacagatcaggatctcagagatgttgcttggcaaagttccagaagggtttacgtttacacccaagcacaaatccaatgcttatgatcgagctgaaaacggctaacaccattcatctctcttcaaagcttgtgcccagccttggagctccatgctgcctgataatgtttacttgaaccggcggtgtaggggagcagcatgattttgcttcacccaaacgacacaattcatgtttatttaaacatagagagctgctactagtaatatgtgatgagggaattaccgtgacaagggattatgactcccttggaccgccaaaagaaaaaatccgcttcatttctgaaggaatttttatttcggtg</dnaseqindica> |
| External Link(s) |
