Difference between revisions of "Os04g0304200"
(Created page with "{{JaponicaGene|
GeneName = Os04g0304200|
Description = Similar to Nonphototropic hypocotyl protein 1 (EC 2.7.1.37) (Phototropin)|
Version = NM_001058950.1 GI:115457629 Gene...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0304200| | GeneName = Os04g0304200| | ||
Revision as of 19:50, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
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Structured Information
| Gene Name |
Os04g0304200 |
|---|---|
| Description |
Similar to Nonphototropic hypocotyl protein 1 (EC 2.7.1.37) (Phototropin) |
| Version |
NM_001058950.1 GI:115457629 GeneID:4335426 |
| Length |
13189 bp |
| Definition |
Oryza sativa Japonica Group Os04g0304200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:13691780..13704968 |
| Sequence Coding Region |
13692419..13692520,13692609..13692749,13693008..13693120,13694003..13694054,13694288..13694410 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:13691780..13704968 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:13691780..13704968 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>gtactctgccgcttcctccagggccccgacaccgacgccgccgaggtggccaagatccgcgacgccgtcaagcacggccgcagcttctgcggccgcctgctcaactaccgcaaggacggcgccccgttctggaacctcctcaccgtcacccccatccgcgacgacaacggcaaggtcatcaagttcatcgggatgcaggtggaggtgagcaagtacacggaggggctcagcgacaagcggatgcggccgaacgagttgccggtgtcgctcatccgctacgacgagaggcagaaggacaaggcgatgtcgtcgatgacggaggtggtgcagacggtgaagcagccgcgcggggcgcgcgcgccggccgacgcggcgctgctgacgccgcccaagatgagcgacgcggacaagatggccgccatgtcgccggtcgtggcacccggcactccctcgggcggaggaggaggagccgggtccttcaagtcgccgctctgggacctgaagaaggaggagtcccgcctgagccggctcgccagcggccgcaagtccggccgctcctccctcatggggttcaagatcgggaagaggagctcggtggggagcagggaggcgccggcggtggtggaggagccggcgccggcgccaccgccggcgccggaggtggtggagaggacggacagctgggagcgggcggagcgggagaaggacatccggcaggggatcgacctggccaccacgctggagcgcatcgagaagaacttcgtcatcaccgaccccaggatcccggacaaccccatcatcttcgcgtcggatagcttcctggagctgacggagtacacgcgggaagagatcctgggaaggaattgcagattccttcaagggccggagaccgaccagggcacggtggacaagatcagggaggccatcagggagcagaaggagatcacggtccagctaatcaactacaccaagagcgggaagaagttctggaacttgttccaccttcaacccatgcgcgaccagaagggggagcttcaatacttcattggtgtgcaacttgatggaagtgatcatgttgaacccctcaggaaccgcctttcggagaatactgagatacagagtgccaaattggtcaaagctacagcagagaatgtggatgatgcagtcagggagcttcctgatgccaacttgagaccagaggatttgtgggcaattcactcaatgcgtgtttctccaaaacctcacaaacggaataacccttcttggatagctatagaaaaggctacaaatttaggggagaagattggcttgaaacacttcaagcctgtaaaacctctcggctgtggtgacactggcagtgtgcacttggttgagctacagggaagtggtgaattatttgcaatgaaggccatggacaagtcagtgatgttgaaccgcaacaaggtacatcgagcttgtattgaaagagaaatatacgcactattggatcatccatttctcccaacattgtatacttcatttcagacgccaacacatgtttgtctcataacagacttttgtccgggaggagaactctttgcagtgcttgataggcaacccatgaaaattttcagggaagaatgtgcaaggttttatgctgcagaggttgtaattggtctcgagtaccttcattgcctaggtattatataccgtgatctgaagccagaaaacattttgctccaagcagatgggcacattgtactgactgattttgatctttcatttttgacgacttcaaaaccccacgtgataaaaaattccacatcattaaaacgaagaaggtcacaagaatttctccccccaacatttgtctcagaaccttccactccatcaaattcatttgttggtactgaagagtatatcgctccagaggttataacgggtgcagggcatacaagtgcaatcgattggtgggctctcggaattctattgtatgagatgctgtatgggcgtacacctttccgaggaaagaacaggaaaaagacattttataacatactgcacaaagaccttacatttcccagtagcattccggttagtcttgcagcaaagcaattaatccatggattacttcagagagatccttcaaatcgtataggttcaaatgctggtgcaaatgacatcaagcaacattccttttttcaagacatcaattggccactcatacgttgcatgagcccccctgaactagatgttcctctgaaactaattggcaaggaaactcaaccaaaagcgaagcctgatgaagatgttcccctaaatcttgatacattttaa</cdnaseq> |
| Protein Sequence |
<aaseq>VLCRFLQGPDTDAAEVAKIRDAVKHGRSFCGRLLNYRKDGAPFW NLLTVTPIRDDNGKVIKFIGMQVEVSKYTEGLSDKRMRPNELPVSLIRYDERQKDKAM SSMTEVVQTVKQPRGARAPADAALLTPPKMSDADKMAAMSPVVAPGTPSGGGGGAGSF KSPLWDLKKEESRLSRLASGRKSGRSSLMGFKIGKRSSVGSREAPAVVEEPAPAPPPA PEVVERTDSWERAEREKDIRQGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLEL TEYTREEILGRNCRFLQGPETDQGTVDKIREAIREQKEITVQLINYTKSGKKFWNLFH LQPMRDQKGELQYFIGVQLDGSDHVEPLRNRLSENTEIQSAKLVKATAENVDDAVREL PDANLRPEDLWAIHSMRVSPKPHKRNNPSWIAIEKATNLGEKIGLKHFKPVKPLGCGD TGSVHLVELQGSGELFAMKAMDKSVMLNRNKVHRACIEREIYALLDHPFLPTLYTSFQ TPTHVCLITDFCPGGELFAVLDRQPMKIFREECARFYAAEVVIGLEYLHCLGIIYRDL KPENILLQADGHIVLTDFDLSFLTTSKPHVIKNSTSLKRRRSQEFLPPTFVSEPSTPS NSFVGTEEYIAPEVITGAGHTSAIDWWALGILLYEMLYGRTPFRGKNRKKTFYNILHK DLTFPSSIPVSLAAKQLIHGLLQRDPSNRIGSNAGANDIKQHSFFQDINWPLIRCMSP PELDVPLKLIGKETQPKAKPDEDVPLNLDTF</aaseq> |
| Gene Sequence |
<dnaseqindica>12449..12550#12220..12360#11849..11961#10915..10966#10559..10681#10128..10234#9890..9939#8832..8935#8529..8609#8306..8390#7773..7849#6543..6632#5822..5881#5347..5451#5184..5233#4939..5045#2414..2484#2075..2303#1706..1991#1515..1606#1231..1412#243..251#ggggggcgaggtggccgcgccgcggccacagaatcccggcgagacgaccgtgagtcgctcgatcgctcacgggctcgcggattgcattatcctcacctgccgccgctgctgctacgcccgccattctttctgtcgcctacttgcttcctcctcttcctcttcctcttccctcgtctccccggcgccacctgactgattggattggtatcgatccaagcctatcagcctagctagtgacctgagtactctgctgtctgctgcctgaatctgaatcgatcgatcactcgctcgctgcctgaagagaggttgctgattaatttgtctctctctcgtcttacttccctttttatgtggcttctcgttgagttggaagaagtggtagaccagtagcccagataaggaagtggatagggtaatggaacagtgaagagagagagagagagagagagagagaggggtgttttgattggtgtaccattcttctgtcaggttgctgttctttacatttctgaacttgaacagtgaaaaaaatggatgggttttttttatagtactccctagataagcaaaagaatccttctgtttaggtatctttgcctttctcgtggtgtcctagatttgttggagcaagggttggttgcatggttttgtgatgattaatttgttcctttttgggtggatgtgagtgtaatgtatgaattttctgattattattatttttttggtgttgtttgcagcaagaatcgatggttgcacggccaagattgctacaccttcgctgataaatagccgaggacaatctcatcggcatccatggcgggcagcagcagctcgaaggagatagtcgacgcggtggagaagtggatggcgttccccacctccggcggcggcggcgccaccgccggcttggagatcgtcgccgaggatgcgcctagcggaagcagcggcgcccaccagcagcaggcgtggcgtccggtggcgccggcgacggcggggcgcgacagcggcggcacggggagcggcaagtcgtcggtggacggcggcgtcgggcgcgcgtcgcacgactccctgccgcgggtgtcgcaggagctcaaggacgcgctgtcgagcctgcagcagacgttcgtggtgtccgacgcgacgcgcccggactgccccatcatctacgccagcgaggggttcttcaccatgaccggctactcccccagggaggtggtcggccgcaactgccgcttcctccagggccccgacaccgacgccgccgaggtggccaagatccgcgacgccgtcaagcacggccgcagcttctgcggccgcctgctcaactaccgcaaggacggcgccccgttctggaacctcctcaccgtcacccccatccgcgacgacaacggcaaggtcatcaagttcatcgggtaagtaagcgaagcactagtcgttcgtcgccattgatgagatgagatgagctttgcattcgagttctgggctgcgattctgattcgggtatgagcgaacaggatgcaggtggaggtgagcaagtacacggaggggctcagcgacaagcggatgcggccgaacgagttgccggtgtcgctcatccgctacgacggtgagcaccgccgccgccgccgcggaatcctctgtttcctcgatgtttctctaattctcttgtcttaccaatgccgccattggcgtgtgtggagcgcagagaggcagaaggacaaggcgatgtcgtcgatgacggaggtggtgcagacggtgaagcagccgcgcggggcgcgcgcgccggccgacgcggcgctgctgacgccgcccaagatgagcgacgcggacaagatggccgccatgtcgccggtcgtggcacccggcactccctcgggcggaggaggaggagccgggtccttcaagtcgccgctctgggacctgaagaaggaggagtcccgcctgagccggctcgccagcggccgcaagtccggccgctcctccctcatggggtcagactctcgcaccccacctgttcgacagattgccgggacggcagtgacactgagagttgtgtctgtccatgctttggcaggttcaagatcgggaagaggagctcggtggggagcagggaggcgccggcggtggtggaggagccggcgccggcgccaccgccggcgccggaggtggtggagaggacggacagctgggagcgggcggagcgggagaaggacatccggcaggggatcgacctggccaccacgctggagcgcatcgagaagaacttcgtcatcaccgaccccaggatcccggacaaccccatcgtaagcagccacttcgccgccgccggtctcttcttctcgccggtcgccggcgtgtttgcgtgtgctggtggtgactgacagaatgggtgtggtgtgggggggttgtgcagatcttcgcgtcggatagcttcctggagctgacggagtacacgcgggaagagatcctgggaaggaattgcaggtcgggagttcaaaacccccttgctcacatctttttattgtttgtcaagtgaatcaactagtgttgtacgtaaaacgaggtgataataacttgtagttaattgaattttaattattacaaacttaggaaaataaattaatctgatattttagaataactttcatatagaaaattttcgcacgaatcgcacattttaacagtttaagaagcgtgccacgaatacccgaaactttatctcccctctgttgggttctcgaatagaggcaaagtgttgtctcgagggattagaatccatatctatatttataatatatttacatgcctgcctatgagttggtttatgtaatttgtaaggttgtgtttctttggtgtactctattctctcgtttttcacgcaaatgctcctcaaactactgtatattttttaaaaaaaaatatctatagaaaagtggtttaaaaaattatattaattatttttcaaaattttagttaatatttaataaatcatatgataatgagtcgttgtgtattgtgtgtgtgaaggataattcccatccctttgagccaaacacacacaacctaattgtcgtggttaggataaagaaaaaacttgatgttcgtccgcctatgtttggttgatggtgtaaattggttttcataaatatgcatttttttaagcatgagtagataaacttaatgttatatactttctctgtcccctaatataagagattttgacattttacttacactgtttgaccactcgtcttatttaaaaaatttgtgcaaatataaaaacaaaaagttatgcttaaaatactttggataataaagtaagtcaaaaataaaataaataataatttcaattttttttaaataagatgaatggtcaaacagtataagtaaaatatcacaataccttatataggggacggagggagtatggcatatgttttttattatagatatcttaacgtgaggattatggataattcaaaagtttaagcggtgccaaaactcttttacagtactgtcgatgtttgatgtcgcgattccggtatttgcatagtatggggatcgttggtactagggtatacgtgaaactgaagtaaaagagatggagacagggatttttatacaggttcgggctgtcacgtaataaccctacatcctgttggccgaagccggtattgctcttattcatcataatcacaccaatacaatatttggggtagcctatctaactgttgtcgatatggcggtctgaaggtctgactcgtagtcgacaacaaggcagtcttcctcctcgagttcgtgtccggcgagatcagagacaacgctagatccctacagtcggcctctgtaggaaccggatagggtcgatccaggtatatctctgttgtcgatatctggcgtttgtcttggcgtatgttggcttgtatgttgtggcttctgttgttccgtgtatgttgattgtctcccctctcttcctagggggtcttgtatttataccaataggtgtccccttgtccatgtagaactaggaaaaccaatatggatacaacccgagtagtccttgtcgtttccatgtagaactctattcatccttccttatgcggaactccttctatattcgaagattatttccgtataagacatggtatgtggtgggtcctgccgagatttaatcaactactattaggtatgtggtatccataaccctgataaatacgatagcataattctctagataaaaaatactctagaaagttccaccctagagattgtgctgattaaaaaaaagcatattacctttcgtgaaaaatgttatttttctcttttgtgaaatttaagaaaattctatagcatttctaaacttatcgcctaaataaaaaacaaaaagggtttaaaaaatatttatagtagtatagtgactgaagttagacagtgcaactaaaaatcacactacaaaggcaggcaacatgtgacagaaattggacttgtgacctactaaacacggtactcgtgacatctgatcttgggtcagactaggctcatatcccaaggcccaagcccaagcccaagcccagcccaatcgcaacggcggagcggctttgcccaccgccgccgccgtcgtcgccgtcgtccgcggcctgcgtaagcctagccccgacggcgatccgccgccgcatccacccctccttgccgcggctaacctcgcatcctcccgtcgcgcgcgccggcggcgga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