Difference between revisions of "Os04g0311400"

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(Created page with "{{JaponicaGene| GeneName = Os04g0311400| Description = Similar to Cysteine proteinase 1 precursor (EC 3.4.22.-)| Version = NM_001058975.1 GI:115457679 GeneID:4335455| Leng...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0311400|
 
GeneName = Os04g0311400|

Revision as of 19:50, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0311400

Description

Similar to Cysteine proteinase 1 precursor (EC 3.4.22.-)

Version

NM_001058975.1 GI:115457679 GeneID:4335455

Length

2507 bp

Definition

Oryza sativa Japonica Group Os04g0311400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:14179680..14182186

Sequence Coding Region

14179681..14180098,14180142..14180221,14180331..14180450,14181393..14181636,14181719..14182011

Expression

GEO Profiles:Os04g0311400

Genome Context

<gbrowseImage1> name=NC_008397:14179680..14182186 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:14179680..14182186 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>acacaagaaatctcacccaaaaaaaaaaaaccaaccaatcaaaaaccaaaccatggcgcgccaccgccaccgcctcgccgccgccgcggcgctcctcctcctcctcctctcctccgccgccgcgctgtcgtcatcggcggcggagggggaggaggacccgctcatcgagcaggtggtcggcggcggggaggaggaggacgcgcagctggacgcggaggcgcacttcgcgagcttcgagcggcggttcgggcggacgtaccgggacgccggcgagcgcgcgtaccggatgtccgtgttcgccgccaacctccgccgcgcgcggcggcaccagcggctggaccccaccgcgacgcacggcgtcaccaagttctccgacctcaccccgggcgagttccgcgaccgcttcctcggcctccgccccccatcctccccaccgacggcctccccgacgacttcgactggcgcgagcacggcgccgtcggccccgtcaaggaccagggttcgtgcggatcgtgctggtcgttcagcacgtcgggggcgctggagggggcgcacttcctcgccacggggaagctggaggtgctcagcgagcagcagatggtcgactgcgaccacgagtgtgatgcatcagaatcgcgcgcatgcgactcaggatgcaacggtggcttgatgaccacagccttcagctacctcatgaaatccggtggcctacagagcgagaaagattacccgtacgctggacgagaaaacacctgcaagttcgacaagtccaaaatcgttgcccaagtaaagaacttcagtgtgatctccgtcaacgaagatcaaattgctgccaacctcgtcaaacatggccctcttgcaattgcaatcaatgcggcctacatgcagacatacatcggcggcgtgtcgtgccccttcatctgtgggaggcaccttgaccatggtgtcctccttgttggctacggatcggcaggatacgcaccgatccgcttcaaggagaagccgtactggatcatcaagaactcgtggggcgagaactggggggagaaggggtactacaagatctgcaggggacctcatgacaagaacaagtgcggtgttgattccatggtctcctcagtgactgccatccatacctccaaaaaggaggagtag</cdnaseq>

Protein Sequence

<aaseq>TQEISPKKKKPTNQKPNHGAPPPPPRRRRGAPPPPPLLRRRAVV IGGGGGGGPAHRAGGRRRGGGGRAAGRGGALRELRAAVRADVPGRRRARVPDVRVRRQ PPPRAAAPAAGPHRDARRHQVLRPHPGRVPRPLPRPPPPILPTDGLPDDFDWREHGAV GPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHECDASESRACDSG CNGGLMTTAFSYLMKSGGLQSEKDYPYAGRENTCKFDKSKIVAQVKNFSVISVNEDQI AANLVKHGPLAIAINAAYMQTYIGGVSCPFICGRHLDHGVLLVGYGSAGYAPIRFKEK PYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVTAIHTSKKEE</aaseq>

Gene Sequence

<dnaseqindica>2..419#463..542#652..771#1714..1957#2040..2332#cacacaagaaatctcacccaaaaaaaaaaaaccaaccaatcaaaaaccaaaccatggcgcgccaccgccaccgcctcgccgccgccgcggcgctcctcctcctcctcctctcctccgccgccgcgctgtcgtcatcggcggcggagggggaggaggacccgctcatcgagcaggtggtcggcggcggggaggaggaggacgcgcagctggacgcggaggcgcacttcgcgagcttcgagcggcggttcgggcggacgtaccgggacgccggcgagcgcgcgtaccggatgtccgtgttcgccgccaacctccgccgcgcgcggcggcaccagcggctggaccccaccgcgacgcacggcgtcaccaagttctccgacctcaccccgggcgagttccgcgaccgcttcctcggcctccgccgcccatccctggagggcctcgtcggcggggagccgcacgaggcccccatcctccccaccgacggcctccccgacgacttcgactggcgcgagcacggcgccgtcggccccgtcaaggaccaggttaggatcggatcacaccatcggattaatttgggatggattgaaaatttgaaatcgttggagttgtttgatgatgattggttggtggatttggggggtgggggtgtagggttcgtgcggatcgtgctggtcgttcagcacgtcgggggcgctggagggggcgcacttcctcgccacggggaagctggaggtgctcagcgagcagcagatggtcgactgcgaccacgaggtatgtccctctccttcgtcttcgtcttcctcctcgcatatcatcatcaagctcttaagtttcttcttcttcttctcgaattgctagctctcgttgactatgagttaatggaactcggtttgattttaattttgattcgagtagatagaatagaaggaatgacgcagagggatattcccgtgggttgctttgttgtgaccagggttaaacctaacggtttagccgatttgatcggtgcccactgaaatgctgaaatttttcggtccgaaattttcgaaattttgaacaaaatttaattgaatttgaacaaatattattaaaattcatgaaaatatttgaaaatttcgaccgaaataatatcgtatcggagggggtccgaaatgaccgaaatttccaaccctggttatgacttactagctgttgtgttgtccttatcttggtttattctgtcctggttggtgagcgacagaaactgtagagtgaaagcaagttggagactcagttctttctcacttgaagcaagttttttggtgctttggatgagaagtaattattttatttaaccaaatttatcccaaataaattcgattgcgtcttacacattttgtagtagacttcacattttaaggttgtattcttacctcttaggttcccaacctccactctctcatttaccgcacgcatgcttcctgaattattaaacatttttgcaaaaattcctatagaaaaattgttgtaaaaaaaccatattaatttattttcaagttttttagctaatacttaattaattatatactaataagcaatcctgttttccttgcccaaaggagagtcccatcatctccttccgaacacagccttatccacatgttatctttaccatttttaatttcatcaaaaggtgcagctaatatatatgctatgctcttgtaaaatttgcagtgtgatgcatcagaatcgcgcgcatgcgactcaggatgcaacggtggcttgatgaccacagccttcagctacctcatgaaatccggtggcctacagagcgagaaagattacccgtacgctggacgagaaaacacctgcaagttcgacaagtccaaaatcgttgcccaagtaaagaacttcagtgtgatctccgtcaacgaagatcaaattgctgccaacctcgtcaaacatggccctcttgcaagtaaaggattcaaacatttgcaaaaatttgaacaaattgctgtcatccgtttgtctattgctgatgtttttgttttttgcagttgcaatcaatgcggcctacatgcagacatacatcggcggcgtgtcgtgccccttcatctgtgggaggcaccttgaccatggtgtcctccttgttggctacggatcggcaggatacgcaccgatccgcttcaaggagaagccgtactggatcatcaagaactcgtggggcgagaactggggggagaaggggtactacaagatctgcaggggacctcatgacaagaacaagtgcggtgttgattccatggtctcctcagtgactgccatccatacctccaaaaaggaggagtaggataggattagtctcctctttgtctttgcataccacacactttgtaatttgctcttttgtggttgaaactgttagtggttaggaccattctgtggtgttgctcgattgctatttatgatcagcaaaaactgtgaaaacttcctttacttgatgtaatagtacatatttgttcgga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0311400, RefSeq:Os04g0311400