Difference between revisions of "Os04g0326300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0326300| Description = SAM (and some other nucleotide) binding motif domain containing protein| Version = NM_001059009.2 GI:297602468 GeneID...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0326300|
 
GeneName = Os04g0326300|

Revision as of 19:50, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0326300

Description

SAM (and some other nucleotide) binding motif domain containing protein

Version

NM_001059009.2 GI:297602468 GeneID:4335490

Length

3184 bp

Definition

Oryza sativa Japonica Group Os04g0326300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:15173161..15176344

Sequence Coding Region

15173161..15173214,15173399..15173460,15173661..15173885,15174577..15174821,15175851..15176344

Expression

GEO Profiles:Os04g0326300

Genome Context

<gbrowseImage1> name=NC_008397:15173161..15176344 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:15173161..15176344 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggtgccgctggatccgtcatccaagcccacctcccagcgccgcatcgcggagggggacaccgtcgtggtgtacgagcgccacgacgccatgcgcgccgtcgccgtgcgcccgggggccgtgctccagaaccgattcggcgtcttccgccacgacgactggatcggccgccccttcggctgcaaggtccacagcgccgcctccgccggcggcggaggggctcgcgggggcaaggggaagggcggcgggttcgtccacctccttgcgcccacccctgagctgtggacgctcgtgctcagccaccggacgcagatcctctacctcgccgacatcagcctcgtcgtctcctacctcgagctcgtccccgggtgcctcgtactcgagtccggcaccgggagcggctccctcaccacctcgctcgcccgcgccgtcgccccgcacggccgcgtctgcaccttcgatttccacgaccaaagggccgcctccgcaagggaagattttgagaggaatgacctgaccagcataatcacagtcgcagttcgggacatacaaggacaagggttccctgaggaacacactggtgctgccgatgctgtgttcttggacttaccccagccttggcttgcaataccttctgcggggactatgctaaagcaagatggagttttatgctccttctcaccctgcattgagcaagtgcagcgggcttgcgaagctatgagatcatgtttcacagatattagaacctttgaaattcttcttcgcacctatgaagtacgagaaggtggtttgaagggtgccacaaccaatgaagagtctaatgcagtgcctcttgctcagaaaaaaagaaaacttcttgctgctgcagaaactttagatgttaagcagaattctagtgttatggttaggccttgtagcactgctagaggacacactggctacctgacatttgcgaggcttcggaaacttgtggactcacaccttcataatagaaggaaattgagtgtgcaaccccatgttcaggagtacttgaggaagtattgggaggagtacttgaggaggtattgggaggtataa</cdnaseq>

Protein Sequence

<aaseq>MMVPLDPSSKPTSQRRIAEGDTVVVYERHDAMRAVAVRPGAVLQ NRFGVFRHDDWIGRPFGCKVHSAASAGGGGARGGKGKGGGFVHLLAPTPELWTLVLSH RTQILYLADISLVVSYLELVPGCLVLESGTGSGSLTTSLARAVAPHGRVCTFDFHDQR AASAREDFERNDLTSIITVAVRDIQGQGFPEEHTGAADAVFLDLPQPWLAIPSAGTML KQDGVLCSFSPCIEQVQRACEAMRSCFTDIRTFEILLRTYEVREGGLKGATTNEESNA VPLAQKKRKLLAAAETLDVKQNSSVMVRPCSTARGHTGYLTFARLRKLVDSHLHNRRK LSVQPHVQEYLRKYWEEYLRRYWEV</aaseq>

Gene Sequence

<dnaseqindica>3131..3184#2885..2946#2460..2684#1524..1768#1..494#atgatggtgccgctggatccgtcatccaagcccacctcccagcgccgcatcgcggagggggacaccgtcgtggtgtacgagcgccacgacgccatgcgcgccgtcgccgtgcgcccgggggccgtgctccagaaccgattcggcgtcttccgccacgacgactggatcggccgccccttcggctgcaaggtccacagcgccgcctccgccggcggcggaggggctcgcgggggcaaggggaagggcggcgggttcgtccacctccttgcgcccacccctgagctgtggacgctcgtgctcagccaccggacgcagatcctctacctcgccgacatcagcctcgtcgtctcctacctcgagctcgtccccgggtgcctcgtactcgagtccggcaccgggagcggctccctcaccacctcgctcgcccgcgccgtcgccccgcacggccgcgtctgcaccttcgatttccacgaccaaagggccgcctccgcaaggtactaatttttttctcttatggactgtaatatttgtttttctgatggaagaatcgatcacctgataaaaatatttaggccgaattttggggagaaaaataaacagctgtgtctaatttatatatattatcttagcattctgcatacatttttttttcttatggactaatatttttcttatggaagaatcgatcacttatagaatatttagcccgaattttggggagaaaaataaacagatgtgactaatttatagatattatcttagcattctgcatacattttttttcttatggactaatatttttcttatggaagaatcgatcacttgatagaatatttaggccgaattttggggagaaaaataaaccactgtgactaatgtatagatacttatcttagcattctgcatagagaaggtagattggtgataattcacaagcaatattatcctttggtggtttccctgcctgatatgattgtcacaaatcagaatcacctgtgcacttttgcacacacattagcttggagttgtccaagctttttgatgtgagatcgttttctgttgtggtggtaatgcacgataaagtgatttgtgtggcaccacctagctggttgtatggagctattttgcagtaatgcacaataaaagtattttgtgtgatatgctgttatagaaaatgactttacagataggatagggccatagggatgatttctcaacttatgtctttgcagcacctgtaagatactaggatgatatgatcgacagggttcacccccttttcaactccacttgaagcataacactaatgtgaaatgcagattacactacagagaaaagtttacttggactaaaaattgttattgtcactcaacatggcacagcagatagagaacttatataacatgaaagagaagattttcagaaccgtgaatccatgattgtccaatacttctccatagacatatcattttgatggatattttcctttttgcaattgcgatttggtttccatttgtaaatagggaagattttgagaggaatgacctgaccagcataatcacagtcgcagttcgggacatacaaggacaagggttccctgaggaacacactggtgctgccgatgctgtgttcttggacttaccccagccttggcttgcaataccttctgcggggactatgctaaagcaagatggagttttatgctccttctcaccctgcattgagcaagtgcagcgggcttgcgaagctatgagatcatgtttcacaggttcaatgcatgctcagaatttttttctgtcagaaattgagggcgtattataactgtttttcatgattcatgggagcaaatgaccccattatactcatagattgattgtggtaccaatttgcacatctgggattgaaagtttgattattttgccttgtgttgctttggagtaattttgggagagaactttacatatttatttcgagttgtagcaaacttgtttagtttgtagtttgtaccttgatagctgtttggatgacagaccttaagttagctgcttcgacaaacagtatttaaagtttcttgtttgagtatgaaagttgtaaagattttgctacagcttacaatttgatgttttgtgggatccatttaacttaggagtcattttcatcaccattcaattttattagtgggtagtcttattcagacttataatttgatgatgcgactctagttctatcatattggagttacagaatggtgacatttagaccctgaaaaattatatcccattttgaatataaattatctacagttgactttactaaacactaaactatttctgaatacataaccatagatttgaaaatattgacctataggtaatacaagtaaacattatcctgagttaacccacaaaagtgggggctgaacaaaagttctattttaacatttccgtgttataatgcagatattagaacctttgaaattcttcttcgcacctatgaagtacgagaaggtggtttgaagggtgccacaaccaatgaagagtctaatgcagtgcctcttgctcagaaaaaaagaaaacttcttgctgctgcagaaactttagatgttaagcagaattctagtgttatggttaggccttgtagcactgctagaggacacactggctacctgacatttgcgaggcttcgtgtgcatggaaactaaactgatcctccatacaggtgagtaggtatacaagagtagggatcaaaattatgtcctgtttaagacctataaattgatacaaactgccaatttatttctacctagccacacttttattactcttttagcgtagtgcttttgtgttgagttgtaactgtttgctcttgctctgtaacttgatagggaaacttgtggactcacaccttcataatagaaggaaattgagtgtgcaaccccatgttcaggtattctctcaagattgatttggagatgatcattctttttctgaaatactgttatggccatttgctgccattgctgatagtcaaccagggtcacctgtactgaactgcatttacctgtacgtcgagctgtgggccttgcatttgttgtaatggtgtagaagtatttcccagagttcctttttaggagtacttgaggaagtattgggaggagtacttgaggaggtattgggaggtataa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0326300, RefSeq:Os04g0326300