Difference between revisions of "Os04g0376700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0376700| Description = Similar to ER lumen protein retaining receptor (HDEL receptor) (PGP169-12)| Version = NM_001059119.1 GI:115457967 Gen...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0376700|
 
GeneName = Os04g0376700|

Revision as of 19:51, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0376700

Description

Similar to ER lumen protein retaining receptor (HDEL receptor) (PGP169-12)

Version

NM_001059119.1 GI:115457967 GeneID:4335613

Length

3261 bp

Definition

Oryza sativa Japonica Group Os04g0376700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18435301..18438561

Sequence Coding Region

18435301..18435337,18435451..18435514,18435608..18435681,18436621..18436736,18436890..18437155
,18438471..18438561

Expression

GEO Profiles:Os04g0376700

Genome Context

<gbrowseImage1> name=NC_008397:18435301..18438561 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:18435301..18438561 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacgccttcaggctcgccggggacatgacgcacatcatgagcgtcctcgtcctcctgctcaagatccacaccatcaagtcttgcgctggtgtttccttgaaaacacaggagctatatgctcttgttttcgccactcgctacttggacatatttacagactttatatccctatacaatacagtcatgaagatgattttcctgggtagctcattctcaattgtttggtatataaggcgccacaagatggtccgcagatcatatgataaggatcacgatacatttcgacatcaatttcttgttctaccatgttttcttttggccttgcttatacatgagaagttcacttttagggaggtgatgtggacgttttccatttatctggaggctgttgcaattcttcctcaacttgtactactacagcgtacacggaacgttgataatttaacagggcaatatgtgttcttcctaggcgcataccgagcattatacatcctcaactgggcctaccgctacttcactgagccacactatgtgcattggataacctggatatcaggattcgtgcagacattgttgtatgcagatttcttctattattacctcaatagtttgaagaacaatgtgaagctcaccctaccagattga</cdnaseq>

Protein Sequence

<aaseq>MNAFRLAGDMTHIMSVLVLLLKIHTIKSCAGVSLKTQELYALVF ATRYLDIFTDFISLYNTVMKMIFLGSSFSIVWYIRRHKMVRRSYDKDHDTFRHQFLVL PCFLLALLIHEKFTFREVMWTFSIYLEAVAILPQLVLLQRTRNVDNLTGQYVFFLGAY RALYILNWAYRYFTEPHYVHWITWISGFVQTLLYADFFYYYLNSLKNNVKLTLPD</aaseq>

Gene Sequence

<dnaseqindica>3225..3261#3048..3111#2881..2954#1826..1941#1407..1672#1..91#atgaacgccttcaggctcgccggggacatgacgcacatcatgagcgtcctcgtcctcctgctcaagatccacaccatcaagtcttgcgctggtgagtgactgatcagccgactggcgcctgcttaagatgcatttttttttactgtattgagtcctggattggttgccagcagctcaagaaaggtagagttctggatcttgggggggaataggggacgctagcacaatgctgtttagtgagggctaagattggtggtgcttgtggatggattctgaggctttagagactggaagtttagagggtttgaggaaattaatcttggctttttggatgcaattggaatggttaagatgtaggtttggtagttgtacatttgaggctggatcctggaggaaatgttggatcttggcttgctctggtaacggcggtggcgttgcataagggcctatgctttttggaagatttcagtgatattgccactccattgttttgctaaaattagagattggtaggttagattctcctattatttttgccttcccccatcttttttctaacaatactgattgattgttagattctctggaaaatttgaggacaatgttgtgttgtctatgttttgtaacgcacttttgtcgacttattgattgttattgtgttaaaaccagagtggtatcatatatggggacctgtcctggtcatttgcatttgtgtttcttaaggatcccatgtacagaaaattttcatgtcctggttcaatcatatctgtccccaaggggccacatgacataaaattttcatatcctggttttttgttgtgaaatgatagatcaggtatatgcggatttatcacatggaacggtaaaggtattgaacttgtcatgtatccatttgcatttttttcatttttgctactcaaaactttttatatatgtttcataatttgaaggaactaaacttgtaatagtttgtccattaaagaagcctttttgctggtcactactcactattcagacccgatttaactgcttgcacatcatgggtgtcatgtttgtggttcgtatgtaagaggccctcagaattactgcagtgctgtaccacttttaaattatgctagcgtgtgtcagcatgcggccaagtaatttacgaattgtattcatagaaccagaacattgaatggctaagattatgtgttgctccagaatttaataataacgagttggtgaattccaataatgtggttgctctcataagtgcagcaaataccatcattcctgtaattttcaatttttcccttgtagacacattagattttggaggatgcttgttttgaacaatgtctgtatcactcactcaagaagtatcatgaacataaaatcaatttttaatttcttttttcttgtaggtgtttccttgaaaacacaggagctatatgctcttgttttcgccactcgctacttggacatatttacagactttatatccctatacaatacagtcatgaagatgattttcctgggtagctcattctcaattgtttggtatataaggcgccacaagatggtccgcagatcatatgataaggatcacgatacatttcgacatcaatttcttgttctaccatgttttcttttggccttgcttatacatgagaagttcacttttagggaggtacttcatcaaatcaacttcttgaagttgtagaaaatataagcttccaatgataatttatctcagcttttaggtctgaattgatatattcccctttagttttattacttctataagttatgaccaaacttttttggggtttatccgaattaggtgatgtggacgttttccatttatctggaggctgttgcaattcttcctcaacttgtactactacagcgtacacggaacgttgataatttaacagggcaatatgtgttcttcctagggtaagttttgaatatggataccattttcttttgagaaaacacaactttcaatattttctgatccatctctgaagcggttaaaccccaattgttgcttgtgtcttgttgatgttagttgtgctcaaaatatagtccacatttaatcaatgagcacataatctttcatcttaattattctttcaggctcctaagttcaacatagtcgagcactgatcattttgcattatcatgttaagttttttgtttaccctttccaatgatttagctgtttttcttccatggataataagatgcatatgcaacgttatcagttagaaattttcaaatgatgtacaccataatgtattccattgtcatctatttaaataagggcatgtgttgttaaagatatttcagacttgaatgatgtgtctaatgtctactgtttttttagtcaatgagaaacatggtcattggaaatagattcataccaaatatggtttcagtaagacaaaatcctaaaattaatcagcattgtatcaacatggtgactatgttgcaaagtaaccatttttttccaggttcagagaacttctgtggagaacatgcgatgtaacatgaaactgtccccttttgtcattaccgtaatttgtttctccattcatctttttggtcagtttgattgatggaatcaattgtccctatttgtgcttctactccacatgctagtgcttgcaaggattttcttttttgacatttgacttgtatatcatcacattgtccttgttagaggtaaccaggccagaaattcagaaacatgtacacattataagtttacgcagtggactttatccatttcattttcagattctatgcaccattattctccattggaagtcagtatgttctttagttagaaatcttgacgttttcattttcgcattgattgacatgatgcagcgcataccgagcattatacatcctcaactgggcctaccgctacttcactgagccacactatgtgcattggataagtatgtcatatctagattgcgttattctgtatttaatttaatatatatgcattgggagcaatctacaacaatttatgtgtgtttcttaaacagcctggatatcaggattcgtgcagacattgttgtatgcagatttcttctattattacctcaataggtaagcaatctgcctttaatttctcactctttccatttaatgaaatttcatgtcgcaatgttgcaccaagtcttctagcaataactaataaacaataccggacatttttgcagtttgaagaacaatgtgaagctcaccctaccagattga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0376700, RefSeq:Os04g0376700