Difference between revisions of "Os04g0381000"

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(Created page with "{{JaponicaGene| GeneName = Os04g0381000| Description = Dynamin family protein| Version = NM_001059135.1 GI:115457999 GeneID:4335633| Length = 10361 bp| Definition = Oryza...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0381000|
 
GeneName = Os04g0381000|

Revision as of 19:51, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0381000

Description

Dynamin family protein

Version

NM_001059135.1 GI:115457999 GeneID:4335633

Length

10361 bp

Definition

Oryza sativa Japonica Group Os04g0381000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18680521..18690881

Sequence Coding Region

18680781..18681017,18681087..18681186,18681298..18681350,18681748..18681894,18681985..18682106
,18683148..18683172,18683285..18683389,18684025..18684138,18684774..18684911
,18684984..18685076,18685185..18685277,18686035..18686141,18686526..18686574
,18687224..18687337,18687812..18687871,18687971..18688039,18689238..18689339
,18689422..18689450,18689534..18689816,18690483..18690836

Expression

GEO Profiles:Os04g0381000

Genome Context

<gbrowseImage1> name=NC_008397:18680521..18690881 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:18680521..18690881 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagccagcggctgcggcggcggcggcggaggccccggcgacggtggggcaggcggtgatcccgctcgtcaacaggctgcaggacatcgtcgcgcggctggacggcggcggcggcggcggactggagctgccgcaggtggcggcgatcggcgggcagagcagcgggaagtcgagcgtgctggaggcgctcgtcggccgcgacttcctcccccggggccccgacatctgcacgcgccgccccctcgtgctccagctcgtgcgccactccgcccccgaggagtggggggagttcctccacgcacccgcccgccgcttccacgacttcgaccagatcaagcgcgagatccagttggaaacggataaagaagctgggggcaacaaaggggtttctgagaaacagattcgtctgaaaatattttcaccaaatgtcctagacatcaccttggttgacctccctggaataacaagggtgccagtaggagaccagcctagtgatattgagtcaagaataaggtcaatgatcatgcaatacattaagcatccaagttgtattatcttggctgtcactccggctaatgcagatttagctaattcggatgctctccaactggcaaagcttgctgatcctgatggttctcgaacaattggtgttatcaccaagttggacatcatggacaggggcactgatgctcgtaactttttactgggaaatgtgatccccctcaagcttggttatgtaggtgttgtaaatcgtagccaagaggatatcaactttaagcggagcgtcaaagatgcacttgctttcgaggagaagtttttctcaactttacctgcttatcatggtcttacacattgctgtggtgttcctcaactggccaagaagctaaatacgattctactaaagcacattacatatatgcttccaggcttgaaatctcgcatcaattctcagttggtagcagttgcaaaagagcatgctgcatatggtgatactgcagaatcaacggctggtcagggggtcaaactgttgaatatactcagaaaatattgtgaagccttttcttccatggtggaagggaaaaataaagtgtcaacagatgaactatctggtggagcaagaatccactacatttttcagtcaatttttgtcaagagcttggaggaagtggacccctgtaagagcataactgatgaagatatccgtacagccatacagaattctgacggtccaaagggtcctatgtttctgccagagttgccgtttgagattcttgtgcgaaggcaaataagtcgtttgcttgatccaagccttcaatgcgcaaattttatctatgacgagctagtcaagattagccgtggttgcttaaccagcgagctgcagaaatacccgattcttaaaaagcggatgggtgaagcagttagcaatttcttgagagatggtcttcgacctgcagagacaatgataacccatattattgagatggagatggattacataaatacttcacatccaaactttgttggaggcaacaaggttgttgagcttgctaggcaagaaattttacctcccaaagcaccaacctctgtaacgattcctaaggatggtactgctattagtcctgagatacaattaacatctgacagaagtcaaaagtcacgtgctatttttgcaagagatgctactagaggagccacctctgatcagggagtgcagcctgatgctgatacaggaacaagtgtggcaggcagaaatcagaggggtcactcactggttgctgggagttcatcaagcaagtcagttgcacgagttcacagcctagataaccttatctctatcatccagttaagagagccacccatcactttgaagccatcagaaaaccagcctgcacaggatgcaacagaggtagccattgtgaaactattgatcaaatcgtactatgacattgtcagaaagagtattgaagatgctgttccaaaggctataatgcattttctggtgaaccacacaaagcgtgagctgcataatgttttaatccggaaactgtacagagaaaacctgctggatgaaatgctgagggaaactgatgaagtaattatcagaaggcagcgtatacaagaaacactccaagttcttgaacaggctcataggacgctcgaggaattttcccttgaagctgaaaaggttgagaagggatacagccctgctgaatatgctactggcctgccaaaaatccatggtctcagcaatggcgaccccagcatcatttacgcatcctcgcctaaccacaatcgaaagaaagcatctcacgaagatcaacatgggtcggtagcgtcatatagttcgacttcctatccagatgctaatggtgggcttctttccacttga</cdnaseq>

Protein Sequence

<aaseq>MAEPAAAAAAAEAPATVGQAVIPLVNRLQDIVARLDGGGGGGLE LPQVAAIGGQSSGKSSVLEALVGRDFLPRGPDICTRRPLVLQLVRHSAPEEWGEFLHA PARRFHDFDQIKREIQLETDKEAGGNKGVSEKQIRLKIFSPNVLDITLVDLPGITRVP VGDQPSDIESRIRSMIMQYIKHPSCIILAVTPANADLANSDALQLAKLADPDGSRTIG VITKLDIMDRGTDARNFLLGNVIPLKLGYVGVVNRSQEDINFKRSVKDALAFEEKFFS TLPAYHGLTHCCGVPQLAKKLNTILLKHITYMLPGLKSRINSQLVAVAKEHAAYGDTA ESTAGQGVKLLNILRKYCEAFSSMVEGKNKVSTDELSGGARIHYIFQSIFVKSLEEVD PCKSITDEDIRTAIQNSDGPKGPMFLPELPFEILVRRQISRLLDPSLQCANFIYDELV KISRGCLTSELQKYPILKKRMGEAVSNFLRDGLRPAETMITHIIEMEMDYINTSHPNF VGGNKVVELARQEILPPKAPTSVTIPKDGTAISPEIQLTSDRSQKSRAIFARDATRGA TSDQGVQPDADTGTSVAGRNQRGHSLVAGSSSSKSVARVHSLDNLISIIQLREPPITL KPSENQPAQDATEVAIVKLLIKSYYDIVRKSIEDAVPKAIMHFLVNHTKRELHNVLIR KLYRENLLDEMLRETDEVIIRRQRIQETLQVLEQAHRTLEEFSLEAEKVEKGYSPAEY ATGLPKIHGLSNGDPSIIYASSPNHNRKKASHEDQHGSVASYSSTSYPDANGGLLST</aaseq>

Gene Sequence

<dnaseqindica>9865..10101#9696..9795#9532..9584#8988..9134#8776..8897#7710..7734#7493..7597#6744..6857#5971..6108#5806..5898#5605..5697#4741..4847#4308..4356#3545..3658#3011..3070#2843..2911#1543..1644#1432..1460#1066..1348#46..399#acattttgctccgctccccccaaaaaccctactccatcggcggcgatggcggagccagcggctgcggcggcggcggcggaggccccggcgacggtggggcaggcggtgatcccgctcgtcaacaggctgcaggacatcgtcgcgcggctggacggcggcggcggcggcggactggagctgccgcaggtggcggcgatcggcgggcagagcagcgggaagtcgagcgtgctggaggcgctcgtcggccgcgacttcctcccccggggccccgacatctgcacgcgccgccccctcgtgctccagctcgtgcgccactccgcccccgaggagtggggggagttcctccacgcacccgcccgccgcttccacgacttcgaccagatcaagcgcgagatccaggtcagccctgcagcttcgcttgtttgcttgcgtatagtactacttttggcgcaatgcttgagactttgagagatctttaatctgtgaaatgatgattgcaaggtggattagcttgcaatccagaagaaaaaaaatgtaggttgtagtttgcagttttagaaaaagggtctgttcactttgttgacttgatacattaccagcattagtccagaaaaaaaggatactccctccgtttcaaaatatttgacaccgttgactttttagcatatgtttgaccgttcgtcttattcaaaaaaaaattgtgaaatatgtaaaactatatgtgtacatgaaagtatatttaacaatgaatcaaatgatatgaaaataataaataattacttaaattttttgaataaaacgaatggtcaaacatgtactaaaaagtcaacggtgtcaaacattttgaaacggagggagtattatggtaaaaaaagcatttgggctaaatttagtggatggagatcgtttggtacctttgctttgttcactgtattgtactgggcagtgggcactgatactttcgcgtacttataataatccttcttttttttggttgggggggggtgggtcttgttttatgctttcgtgattcttacgagatgaattatgttgactgtttttcagttggaaacggataaagaagctgggggcaacaaaggggtttctgagaaacagattcgtctgaaaatattttcaccaaatgtcctagacatcaccttggttgacctccctggaataacaagggtgccagtaggagaccagcctagtgatattgagtcaagaataaggtcaatgatcatgcaatacattaagcatccaagttgtattatcttggctgtcactccggctaatgcagatttagctaattcggatgctctccaactggcaaagcttgctgatcctgatggtacttaaataactctggttgtagttataagtttctttaccgtggaatgatttatgaatgcaaatttattgttgttctggcaggttctcgaacaattggtgttatcaccaaggtacttttgcaatatataaacaatagtgcataccctttacttactttgtgatcactatgttaaccttgcttcaatggcctagttggacatcatggacaggggcactgatgctcgtaactttttactgggaaatgtgatccccctcaagcttggttatgtaggtgttgtaaatcgtagccaagaggtaccttctaagacaataccatgaaccttcattagattgactatcatcttgaatttcttcttcgagttccatagtctcacatgatatgacaatgttttttctgcaatttagaaaattatatggtttgctcatgcatcttcaattgaaatgaatttagtttcaaagttaattttttaatatgtggtgttaatagattgaactattcatttaaacttgaatcttgtcagatagctaagccttatatgccttgatagttttgtattggtaccaaatgatggcttgatacatagttaagtacaagcagtgttcacctagacgctagacgctagacggacgatgacccatggtctagagtctagccagtctaaacgcaagtctagacggtctagacgatataccgtacactatattatcggcatactcttttggcacacatgtaaatatgcttaacatttttcatagaatattagagaactagcggtgctatgataggtgtagccactcgagtaaagttgtgggttggagagaggtgggagcaaggtcctctgtgacgactagtagaggagagacgacatgattttgttgcagtgactggcctagagtagaagagaacggtatggaaatggggtcaaaaccataaaccataagggctttggtctaggctcgaagtttcagctctagcaacacaaaaaatgcattggcctattgcctagaccatagtctaaatgacaggtttacggtctacactcgtctaaatgttgtttaattgtgtggtctaggcagtctagaaccatctttgaccgactagacggtcaaacagtctaattcacagtttagactctaaactagacgataacccatcgtctagcgtctagacacggtctagaccgtctagactatggtctaggcaaacacgtgtacaagatgtcataacattgaattgagcttgacatacgaatgaacaaattgtacacatgaaaataacaattactcttttgaaacttgatagttttgtattggtaccaaatttgggcgcttatctttttattaagaagttcatgatgtccttttcagacagttgcaattctggttcaggttatgatcatgatcttaaaactgttgatgcattgctaagttgaaatatttgcactcaaatgatatacatttctaatatctaacatctggatgattctaacaggatatcaactttaagcggagcgtcaaagatgcacttgctttcgaggagaagtttttctcaactttacctgtatgttagggccttgatattttgttcaagcagtactacccattgtgaaatgacatattttgctaaattcttgattaatatcttttgtgctattaacaggcttatcatggtcttacacattgctgtggtgttcctcaactggccaagaagctaaatacggtatatctgttaattattgctatctagtttttttttcctttattcattttctcagcctcattagattcctcctgtcaatatcataaacaaacattggcaacatgggcttcattggaaattgttcgctaagacaaactgactcagaatgaattagcagtcatttagtgcaagattatgagccaacgtaagatgcttcatgattaaattaaaacctccaaagaagtattgaggaggtcagaaaatcacttacactaaaggggcatgcttaataatactctcaacacccagatgagcattggttttaaaatagtaaatgatgaatttattctcttataaaccgaacttactgcaatgctttatcttttaattgaaaatgcgaaaatttggtactgtattgtaactttatctgcatgtgatttgctaatgcatcgtatatctgcaattgactacggcagctcttggctccttttgcagattctactaaagcacattacatatatgcttccaggcttgaaatctcgcatcaattctcagttggtagcagttgcaaaagagcatgctgcatatggtgatactgcagaatcaacggtaataacattctcagctcataattgtaaagttgtaacatgtccctcatcaactaactacgaaaactatacctctagtcacaaaagggtgatgtttatgacttttcaaagtaaacaaaatgccatttctatcactaaattttattgttgtgtattttaaaaatattgattttatagaagtatttttaatcataactttactcctaccatttttatgttatccaaattatacactctaggtggtatctttggctaaaatatcattttggctgcatctgttcatgagtactccctccgtttcatattataagactttttagcattgcccacattcatatagatgttaatgaatctaaacacatacgtatgtctagattcattaacatatatatgaatatgtgcaatgctagaaagtcttataatatgaaacggaggaagtatcaaattttttatgactagagggagtgtgtatttgcagtttatcatccttgcaagagaactgcttgttgtgtgaatatcacatgcctggctgccaagcttcttagaagcagctttcttatgtgtgtcctattttattttgtagtttaagttttaatggcttttgagcatttctactttcagtgttgattttttcatcccaatgcatgcaggctggtcagggggtcaaactgttgaatatactcagaaaatattgtgaaggtacaaaaaaaaaaggagagaataaatttaccatatttactgtaagacttgacttaccaactgtgctttgctaccagtttatctagaattacagatggctcttgtgcagtttttcttatataatcctttgctgcttcctgcttgtagcaataacttgacagctcaacaataaaatcgatagctagaaaattatccttgatttgtgtaaattttctaggatagttgtgcaaacatttagatcacaaaatactgagatttgagagtaatcgattctttcataagattgttgctcatgtgcatagtttttcgtcctcttcaatctgccactttgatgattccctaagctatattcttctaatgtgattatgttttctctgtttccagccttttcttccatggtggaagggaaaaataaagtgtcaacagatgaactatctggtggagcaagaatccactacatttttcagtcaatttttgtcaagagcttggaggtaagcaaaagcaacagctttacattatttagacatcagagacgtgttagtgacttagtgtaataaaatttatatatgtatgattgtgagtgatttttctaaaagaactttggaagtgaacaccagatcaagtcatatggtttaaatagtttaaagaaaaaagaaaccagatcaagtcataggtcactcgctggtttccctggtcggcatgtgtgaaccgacctgtggtggcgtagcgggccctcgtgtatggggctgggcctcaaagcatgggttaaggcccaaatcacagggggcagcatccccatgtatgagggggaccagctttcgtgacctttattggccgggctccggttgagctcttcttagtgaaaatactgtgggggcagtctttcccctaccggccaagttttttttttaatactttttggggattttcttgtgattacccatctgcagttgtcggcagtttctcatccagaaaataaatttgtgctttgcataatttgacctttttagtgctaaaactttctatattacctatctaaacataattgtctaaaaagaaaccgtgcactctgccataaaacattaccctcttgcagcaaagcacagtttctaggtagaaacaattatatttctgttcaactgtgacattggtaaactgcatacatcacacacttacttgtatttcttttgtttccattctttacttatttcatctgctagtttatatttcagttgtcttaatccacaggaagtggacccctgtaagagcataactgatgaagatatccgtacagccatacagaattctgacggtccaaagggtcctatgtttctgccagaggttagtgtttttctgaaatgtctactgtttgaacaattatggtatatctgattcatgctttttttagctaacttgctgcttgctcataaatgttctgtggaattgtagttgccgtttgagattcttgtgcgaaggcaaataagtcgtttgcttgatccaagccttcaatgcgcaaattttatctatgacgagctagtcaaggtatgtctttgtacctctgttgtatcatacgaacctttaatcaacctgtttaagaatccctaaatcatgcagattagccgtggttgcttaaccagcgagctgcagaaatacccgattcttaaaaagcggatgggtgaagcagttagcaatttcttgagagatggtcttcgacctgcagagacaatgataacccatattattgagatggaggcaagtgtttactttcctgaattcttattgttcaattgaaggttattggattgtttctgaaacaaaatttgttgttatgagtgtttaattatatttatattattttgatacaagataatcattaaacaaggatttgtttatactggaaatttagtttcatcaaacactggatatatcctatgatacactattggatatccattgcaaagaagttggctgtagatgcttctatgaacggttttgttttaaacctttaacctgttgtactatagaggattgagttcggaaggatatcttcatttttattttattatgctctcagaatatgccatgttcacaattatctcacatttcttattctttttaaatttaaggaacaatctaatttcattgccaagtcttacacttactgatgctaatagggtgttttagattgtttactagcagcctattttaaccatgagcttttgtttgttttgaattttgggtattgctacatgctaatggaataacatgtagtgagctacattctagtgaagtacctgttggtttgttcaatgattgtgcatagtaaagtatctgtgttttgttgattttcttatgggtaatgagtaataccacatatcttgttacagatggattacataaatacttcacatccaaactttgttggaggcaacaaggttgttgagcttgctaggcaagaaattttacctcccaaagcaccaacctctgtaacgattcctaaggtacttccttttgcatcttagatttgggttgcttcttctattcttaaaagaaaagaaaataaatgatttagttttggaatcctgtggttgtacctttgctgccaaataatgaggatttggcttgttcatttaatctgcatctcaataaattctacttttgttatcctgcaaattgtttatattctctttagtataatacatcatagtttatctgtaattaataatttagtactccctccgtcccaaaagtataagggatttcggttggatgggagtcctagtaccacgaatctagactatccagatttgtagtattaggatatattccatccaaccgaaatcccttatattttgggacggagggagtagttgctgtcatcctcaagttcctttacaagaaatcaactaatggtaagtgtagaaaaggtcaatttgtatgtttcattattaatctgagatcaatgtgaaattgaagccatacataagttacctcaattaaaccagctaattcatttcaccatttgcatgtaagatagtacataacatattaacatacgccagaattttctattgactgtctttgcactcttgcattaaaaattttactgcttactcttctgttacccttaccgtaggatggtactgctattagtcctgagatacaattaacatctgacagaagtcaaaagtcacgtgctatttttgcaagagatgctactagaggagccacctctgatcaggtttcaaatactagtatttctttgttttagatcgtaattttcagacaatgaaatgaagagattaacctttctttacttcacttcattatctgcttctgtttctgctggacagggagtgcagcctgatgctgatacaggtaaactggtgtacctataattatacaagtcatagacttaaacccagcatggctttacacaagttgaacctgttagcagtggcatcaggttgccattggcatcttaatgctgcttggcgctgatacgtactctttctgttcctaaatatgtcctgttgggtctgtgatagtgtttcacaattttaaacttctactcttagtacataagagtacttttattggatttgtctttcagaatacttccacaacatatatatgcatattattattttttttacaagatatcatatgattatagtaaaaaaaaaattagccaacacattgtggatatagcgtactgtaatttatacaaaatactgacttatatttttatactgaaggagtatttagtggaggaacaataggaattaggactctttaggcggagtggctttcttggaggcctgtcttcttcgaaactcgaaattcattttttcaaaagaaacagtagttttgatggaaaaataatcttgcctgtccaaactgttgtattgatttgacaaaacactgaaacatgcttatgtgctaatttgcagtctatgctgcagcagttgatatttaattttgtctcctattctccttcgaatgggagtcttggatccactttttatgtatcatgattcttaggagtgctaacttgaaagctacatgttgtgaataccatttagttgatattacctgtccttttttaatgattgatgtaattagattgcacatgtacctactttttcgtgacataattaactaggaaggcattctaactcataatacttctgaaggaaataatacatgtttcatgcacctatatttttttctttgaaaaacagagtacctagctgtaaccataagcttcatatgcatagtattctaccagaaagtatcgacctgcttttctttgactcctgcaacaaaccatacattaaactgttcatacgttgtggcagctttagataggtgataacttttttggctatgatctgacatatgactcagaaaatacaggaacaagtgtggcaggcagaaatcagaggggtcactcactggttgctgggagttcatcaagcaagtcagttgcacgagttcacagcctagataaccttatctctatcatccagttaagagaggtgatttcactatcgcaagtcagttttcaaagatggaattcaaaatattttaatattccatttctgattattctctatatttcttaccagccacccatcactttgaagccatcagaaaaccagcctgcacaggatgcaacagaggtagccattgtgaaactattgatcaaatcgtactatgacattgtcagaaagagtattgaagatgctgttccaaaggctataatgcattttctggtaagtttagctttttacatcttgttattagtaaatgaaagctttgacggtgactgagacttatagaagtcatcgtaaacatcaggtctgcagtaattattgttggttgttatgatactaaaccctactttaggtttacctgtattgaatcaaaataatcatggcacgtattgaatcaaaagcttgtgaaactcattatgttcaacaataatctcgtgccacttaaggagttaatgctgtaagtcactaacttccatgaactctggactttggtcattgtccacacagactattattatttgttaatatagctttctaactggtcaattgtgatctaacttatgtatataatcttcggttgctgtaacactggttttttactgatattttacctcaggtgaaccacacaaagcgtgagctgcataatgttttaatccggaaactgtacaggtgcatgcgttgttctttgttttacttttgtgacaagcagttcaatcaaactgttaattttgagattacttttacagaaagggttgttctgaatgatgttatgctatgcagagaaaacctgctggatgaaatgctgagggaaactgatgaagtaattatcagaaggcagcgtatacaagaaacactccaagttcttgaacaggctcatagggtatcttcagtctcctagatgtcctcatctatttgttcggcaatcttttgatatctatttatttttcagacgctcgaggaattttcccttgaagctgaaaaggttgagaagggatacagccctgctgaatatgctactggcctgccaaaaatccatggtctcagcaatggcgaccccagcatcatttacgcatcctcgcctaaccacaatcgaaagaaagcatctcacgaagatcaacatgggtcggtagcgtcatatagttcgacttcctatccagatgctaatggtgggcttctttccacttgatcttgatcaatttctcctatcattttcaagtgacgtgcttcagttttgtcctgtaaattcaattttttgttagtgggctatttttttctgcaactggcagctatttctggtgccgcaccttgatcttgtaatctagcagttgcactgaaatagcaggactacaggagcccaagtacattcatagccaacaggggcaatggaatggtggctgtgtagattaacaatgtaactagccccttatatcattttgccttttttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0381000, RefSeq:Os04g0381000