Difference between revisions of "Os04g0393900"
(Created page with "{{JaponicaGene|
GeneName = Os04g0393900|
Description = Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1)|
Version = NM_001059185...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0393900| | GeneName = Os04g0393900| | ||
Revision as of 19:52, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os04g0393900 |
|---|---|
| Description |
Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1) |
| Version |
NM_001059185.2 GI:297602630 GeneID:4335687 |
| Length |
5246 bp |
| Definition |
Oryza sativa Japonica Group Os04g0393900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:19386827..19392072 |
| Sequence Coding Region |
19387156..19387273,19387754..19387950,19388376..19388565,19390380..19390771,19391276..19391743 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:19386827..19392072 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:19386827..19392072 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggggtggcgctttgtcggctgctgctgcggcggcgtcgtcgtcctccggcgtcggcggcggtgggtgggaggggacgtctacggcggcgccgcgcgtcgagaagatctccgcatggggctagggggagaggcaatgccaccgtgaagaaggagctctcggctctcaaggatgccaatggcaatgtcatctccgcgcagacgttcaccttccgccagctcgccgcggcgacgaggaacttcagggaggagtgcttcattggggaaggagggtttgggcgcgtttacaagggccggttggacggcactggccagattgttgctataaaacagctcaatagggatggtactcaaggaaacaaagaatttctagtggaggttctcatgcttagtttgctgcatcatcaaaaccttgttaatttggttggttattgcgccgatggagatcaacgccttcttgtgtacgagtacatgcccctcggatcattggaagatcatttgcatgatctccctcctgataaggttcccttggattggaacactaggatgaaaatcgcagcaggtgcggctaaaggtctggagtaccttcatgacaaggctcaaccaccagttatatatagggacttcaagtcatcaaatattctattgggcgaggatttccatccaaagctttcagactttggtcttgctaaattgggtcccgttggtgacaagtctcacgtctctacacgtgtgatgggaacatatggatattgtgctccggaatatgctatgacgggacagcttacagttaaatcggatgtttatagcttcggagtagtcctgcttgagttgattactggccggaaggccattgacagtaccagaccacatgtagaaccaaaccttgtctcatgggcgcgacctcttttcaacgacaggcggaagctcccaaagatggctgacccggggctggagggacgatatccgatgcgcgggctctaccaagcgctcgcggtggcatcaatgtgcatccagtcggaggccgcgtcccgacctctcatcgccgatgttgtgaccgcgctctcctacctggcgtcccagaagtacgatcccaacacgacgccgtcctcaaagaaggccggcggtggcgaggccgggagggcgctgtccaggaacgacgaggcgggcagctccggccacaagtcgccgtcgagcaaggactccccccgggagcagcagctcccggggatcctcaacgacagggagaggatggtggcggaggcgaagatgtggggggagaactggcgggagaagaggcgcgccgccgccaccacctccagcaatgcccaggtgagcctggattcgcctaccgaaaccggttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MGVALCRLLLRRRRRPPASAAVGGRGRLRRRRASRRSPHGARGR GNATVKKELSALKDANGNVISAQTFTFRQLAAATRNFREECFIGEGGFGRVYKGRLDG TGQIVAIKQLNRDGTQGNKEFLVEVLMLSLLHHQNLVNLVGYCADGDQRLLVYEYMPL GSLEDHLHDLPPDKVPLDWNTRMKIAAGAAKGLEYLHDKAQPPVIYRDFKSSNILLGE DFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVLL ELITGRKAIDSTRPHVEPNLVSWARPLFNDRRKLPKMADPGLEGRYPMRGLYQALAVA SMCIQSEAASRPLIADVVTALSYLASQKYDPNTTPSSKKAGGGEAGRALSRNDEAGSS GHKSPSSKDSPREQQLPGILNDRERMVAEAKMWGENWREKRRAAATTSSNAQVSLDSP TETG</aaseq> |
| Gene Sequence |
<dnaseqindica>330..447#928..1124#1550..1739#3554..3945#4450..4917#aaagcctccctcgttgaggcgaccacgagctcccccccaagaccacggcgcccccgcaggcggcgtccaccaccaccaccacctcgatccgcgccgccgccgctggtggggaaggcagctagccggcgaacgcgcgcggaggagaggtggaggggaaatgcgggttcgtctcggcgccgcggggcggagccggaggtgattctgttttcttggcgaggcggaggcggaggtggaggcgatgggttgcttcccgtgcttcgattcgaggatgggggaggaggaggaggaggagctgtactacgggaaggggggagcgcgcggcggaggcaatgggggtggcgctttgtcggctgctgctgcggcggcgtcgtcgtcctccggcgtcggcggcggtgggtgggaggggacgtctacggcggcgccgcgcgtcgagaagatctccgcatggtgcgttccgtgcgtgcgtgcgtgcgtcgggccgagccgtgtgtgaatcggtcgccgccgcccccccccccccaccccattcgggttggtaggatcggatccgcgcgtgctcgctcttggcttgatactttgatgctctgctagtactctgttacttctcctcctcttggttggtcacgaactcgcgatgaactggttggtacttggttgatcctcgtgatgggattgagagagagaagaaaaaaaaaagaagacgacattgaaaatagctttggttttgtgagccctttagatctccgagaaatagcgaggggagaaacaacaaacacgaatcttcggacgaactctgcaacctttttagttttagtatagctcattggattggattgtatatatatgtacgcgcaattcttgtttcaatgtttaagtctattattagtcgcttttaaaaagccatgatttgtgtgggattatgtgcaggggctagggggagaggcaatgccaccgtgaagaaggagctctcggctctcaaggatgccaatggcaatgtcatctccgcgcagacgttcaccttccgccagctcgccgcggcgacgaggaacttcagggaggagtgcttcattggggaaggagggtttgggcgcgtttacaagggccggttggacggcactggccaggtaaaaactcatctttttttatttatttatttttgttggctctgacgctttcttgctaaattgctgtagaggtagtggtactgaatttgcttggttgtaccgaaacacgtcattgatttgtctaggacattcaagaaaatcagtgtttgcacttgagtgagagggatccccacaagggaaaaaaaagtccatgccgttcaatcatactagcagatccaatttatgttggcctcaattgtgaatagtgtttaaactgttcataggcccttctgttcattgaaattgaattgaacaagatggatcacatgaaacagctgatgcatgcccttttttaatttaatattaaatattataaatcagaattcacaaaattatgagattaggtgcagcacttagctgaaaactttgatgcatcccttctgcagattgttgctataaaacagctcaatagggatggtactcaaggaaacaaagaatttctagtggaggttctcatgcttagtttgctgcatcatcaaaaccttgttaatttggttggttattgcgccgatggagatcaacgccttcttgtgtacgagtacatgcccctcggatcattggaagatcatttgcatggtaagactgttctttgtttatttatgttgctctggtgcatagtaatgcctctgtacaagtactgcacaaatctgtgctacctgttgtttctcacatgtttattggagcaggttgtcaatctgccatgctgtctgtcccgcatctgtctgttatttcattttgtccatgtgcatagttcttcctatggttgtgagacattttctctcccagctccaaagtccttttgtccatgcgattgtgcataatgtgcagtgtccagtaggtttttctccatgatagagtgtgccccttttgggggtccataggatttataactacccctcatactagagcattttacctaactgcagttcccaatctttttctttttctggtgctgcctaattatagtagggtgaactgttcatatttgtacatttattctccagacagtgtaccgtaaaatcaactttttgagacatgtttcacagcataatgttcttttcttggtaattctccagtagagcaaatcaggaaactttatctttttttctgttttgactattcaaagttggatgccattcgtatgtatgcatttttagcagcaaaagttgctggtgcccagaggacccattgcccccctttaacgaaatccgactagtccaacatgatgcagtgtaatttcaaaataaatcataaatgcagacataaagtgtgtaaacctacacttctttaatttcaagttcattttagatgctaagatattaaaagaaagggacaaacaatactgttattgcatgatgaaccctactgtgctgagcgtttgtctgttttgtatcttgacatatagggcaatttgaaattgaatttttgcagcttttgaaactttgtctgctattatgtgatttattttggaatatttgaaacatcgcgtcatgttgtatttgcaaagtggaacgccaggtcccttgggcatcaaaactggctaactttagtattggtgatgtatccaaaaagtccaaaccacccatttgccttttataacatgcatgtctttttcagaggcagtaaagaatttaaccttcaaattttaattttcttcaggttaactatgttacctaactgatggctgttagctttcccgccaagatagtagcttgaaatggaattggagcaattattaggtgtacaagtctgctcacttatggaccaacacattcaactaataaagtccatgtttcccacatattagtccatattggtatgaaattataaaccgaactaaagtaacatgggtcaatgggtacccgtgggtcggcacgcttggcaaatgaacagacaaaatagtaaccctggtacgctttgggcaatattgtgcccataaagtacattgttgaactataacatttctacaggtctagctatgtaacagtatgctgcgtatattttcttttggaatagtacccctgtgaatctgtgatccatgtgttgagtcagtgttaataaaagggaccagaattttttaacaagtgttgcaagtaggcgcggacccaggattggcccaaggcctgggccagtctattgtaagttgggccttgcatggacattacatagtggaaaaaaatcccagtcataatgggcctccaatcctaggcacgcccctggttgcaagtagagttcagtaggttttcaaacattctgcaaaatatgtgtttgtatgatacctttcagaccttattccaagtgattgtgcatgtgtagtaataccttgagcagtgaaaatatttttttaacctactgaattaattttcacttgtggaaaatacctgatgcagatctccctcctgataaggttcccttggattggaacactaggatgaaaatcgcagcaggtgcggctaaaggtctggagtaccttcatgacaaggctcaaccaccagttatatatagggacttcaagtcatcaaatattctattgggcgaggatttccatccaaagctttcagactttggtcttgctaaattgggtcccgttggtgacaagtctcacgtctctacacgtgtgatgggaacatatggatattgtgctccggaatatgctatgacgggacagcttacagttaaatcggatgtttatagcttcggagtagtcctgcttgagttgattactggccggaaggccattgacagtaccagaccacatgtagaaccaaaccttgtctcatgggtaagctattgtgtttttctactttctatattagcatctgattatcttaacttctggcatttacactgtgttgacatcagccatcactttcttcaaaagatttattgggaaagtggatgttctaatcattgtcagaactaaatgtagggtgtgtatctagaaatagctacttgatgtctctgttttggtagacaatgtgattgaagcaagcacgtccctacaatatatcttcccaattgtatattgaaatgttggagctgatgtcaatagaagtcatgccaaacccaggatatgatttttttttttttttgatctgctagttccttgtagtgcattactgcttttacgcatttgcatatgtccatattgcttgcatatacttgtgtattcgatgataaagatcatttggtattttctgtgcaatggttgctgctgttctattttttttttggaattgaatggattgaatgtagtcatcagtgattatactcggttaatttgcaggcgcgacctcttttcaacgacaggcggaagctcccaaagatggctgacccggggctggagggacgatatccgatgcgcgggctctaccaagcgctcgcggtggcatcaatgtgcatccagtcggaggccgcgtcccgacctctcatcgccgatgttgtgaccgcgctctcctacctggcgtcccagaagtacgatcccaacacgacgccgtcctcaaagaaggccggcggtggcgaggccgggagggcgctgtccaggaacgacgaggcgggcagctccggccacaagtcgccgtcgagcaaggactccccccgggagcagcagctcccggggatcctcaacgacagggagaggatggtggcggaggcgaagatgtggggggagaactggcgggagaagaggcgcgccgccgccaccacctccagcaatgcccaggtgagcctggattcgcctaccgaaaccggttaagctggctacccccgccattggtgaaggtctctgggcaatgggcatgcgttgctgcttgagctcatcttgtgatcttactagactgggtgtttttttgctttcagttggcaggggtcagctgaaaacgaattgggtggtgatttttcctttcttttttttttttactgtttggtgttagaatgtacatttgtagtggtgaaacaacaagaactgaaaaggcgagagagtgggaggggagaagaatttgggtgctttgtactgtggatgtcatggtgcctgtaaattctcggaaaattttgcatcaacgaggaacaaatttgtcggacctc</dnaseqindica> 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| External Link(s) |
