Difference between revisions of "Os04g0405600"

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(Created page with "{{JaponicaGene| GeneName = Os04g0405600| Description = Protein of unknown function DUF1350 family protein| Version = NM_001059246.2 GI:297602665 GeneID:4335751| Length = 6...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0405600|
 
GeneName = Os04g0405600|

Revision as of 19:52, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0405600

Description

Protein of unknown function DUF1350 family protein

Version

NM_001059246.2 GI:297602665 GeneID:4335751

Length

6373 bp

Definition

Oryza sativa Japonica Group Os04g0405600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20145649..20152021

Sequence Coding Region

20145908..20146002,20146400..20146508,20146688..20146858,20148475..20148624,20149181..20149288
,20150141..20150196,20150477..20150540,20150614..20150722,20151236..20151360
,20151460..20151529,20151610..20151896

Expression

GEO Profiles:Os04g0405600

Genome Context

<gbrowseImage1> name=NC_008397:20145649..20152021 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20145649..20152021 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgataagggttgtgtctccgccgcctccgtccaccgtgcagctgcgcggcggcggcggcaccccggggccctcctcctcctccgcggtctgccgtttctggggttcccgaagaggaagtagagttgcggcgacgagtagttggggttgggggaagagtaggaggaggaggcgcgccgccatctcatgctgctctgctgaggaaggggaggggccccgggtcgccacgccgtcggctcccccggcgccgtccgagggatcgatacagctctactcgcagatcgagagggtgatcacggaggcggcgaagcagtcccgggagggctggggttcgaccggagattggaccgagatcgagggagcgtgggtgctgaagcctaaatcacaggagccctcgttcgttgttcacttcgttggtgggatttttgttggagctgctcctcagatcacttatcgtttcttccttgaacgacttgcagacaagggagctttggtgatcgcaacgccatatgctagcggctttgatcatttcttcatcgcagatgaagttcaatttaagtttgacaggtgcttaagaaacatggttgaacctgtaaatgaccttcccacatttggtgttgggcattctttgggatctgtgatccaccttctcattggatcaagatacgctgtgcagcgaagtggaaatatattgatggcctttaacaataaggaagcaagcttggcagttccattattttcgcctgtaattgttcccatggcacagagttttgggccaatattttcccagttgacatcatatccaacacttcgttttggggcggaagcagccattaagcaacttgagaatcttagccctcctgttgttaagcagctcctgccattagttcagcaacttcctccactgtatatggatttagtaaaaggccgagaagaattcgttccaaagccagaagagacacgtcggctggtaaaatcctactatgggatttctcgaaacctcttgataaagttcaaagatgatcaaattgatgaaacatctattcttgcgcaagtactaagctccgaatctgccattagctcactgcttgacatgtcaattcggtcacttcctggagatcatggactaccgttacagcaggtacttcctgatgttccaccagcaatggccgatgcagtaaacagaggaggtgaactcctgacaaatctagcaacagggacaccatgggaggctgttgctaaggaggtaggcactgggggtgcacagtactgcacagtcctgtccgcaaatctacagttcagttttacaagaaatgttcatttggtagcaacggaaggtctatag</cdnaseq>

Protein Sequence

<aaseq>MIRVVSPPPPSTVQLRGGGGTPGPSSSSAVCRFWGSRRGSRVAA TSSWGWGKSRRRRRAAISCCSAEEGEGPRVATPSAPPAPSEGSIQLYSQIERVITEAA KQSREGWGSTGDWTEIEGAWVLKPKSQEPSFVVHFVGGIFVGAAPQITYRFFLERLAD KGALVIATPYASGFDHFFIADEVQFKFDRCLRNMVEPVNDLPTFGVGHSLGSVIHLLI GSRYAVQRSGNILMAFNNKEASLAVPLFSPVIVPMAQSFGPIFSQLTSYPTLRFGAEA AIKQLENLSPPVVKQLLPLVQQLPPLYMDLVKGREEFVPKPEETRRLVKSYYGISRNL LIKFKDDQIDETSILAQVLSSESAISSLLDMSIRSLPGDHGLPLQQVLPDVPPAMADA VNRGGELLTNLATGTPWEAVAKEVGTGGAQYCTVLSANLQFSFTRNVHLVATEGL</aaseq>

Gene Sequence

<dnaseqindica>6020..6114#5514..5622#5164..5334#3398..3547#2734..2841#1826..1881#1482..1545#1300..1408#662..786#493..562#126..412#ggtgcgcgtgatagctctactctcgcggtcgctgtgggcgcggggcgggttggcgaagcggagacggcacgcgcggagtccgtacggccgcagcgaggcgacgtggtggcgtcgagtcggcggcgatgataagggttgtgtctccgccgcctccgtccaccgtgcagctgcgcggcggcggcggcaccccggggccctcctcctcctccgcggtctgccgtttctggggttcccgaagaggaagtagagttgcggcgacgagtagttggggttgggggaagagtaggaggaggaggcgcgccgccatctcatgctgctctgctgaggaaggggaggggccccgggtcgccacgccgtcggctcccccggcgccgtccgagggatcgatacagctctactcgcagatcgagaggtaggcgatggctaattccgtgcctgcgaaatctctctcctagattgataacatcttttgttgttgcggccggcgaacagggtgatcacggaggcggcgaagcagtcccgggagggctggggttcgaccggagattggaccgagatcgaggtgcgcttcggtgattgcgacctcaattgagagtgcaaaattttcctgctactgttgttgatgcagagtgattttacttactactggttgttctgatagggagcgtgggtgctgaagcctaaatcacaggagccctcgttcgttgttcacttcgttggtgggatttttgttggagctgctcctcagatcacttatcgtttcttccttgaacgacttgcagacaagtatgtggacaagcaatgcccaatgacccaaaattatctgtgtgcaacagtctaattctgctcaaagactgaaacagcgcggcatttgatttgttcgtaacgctggagagttgactatagttctatacccgaaatgcaacctttgaaaatttagccctccctttgttgtgtgtttaactagtgcatcattgcttgaccatgaatctagagaataagagctttggtgtgtaatttgtcattattaactgcaaggcacctctttatgtggttctaagcaagacacgcatgttcaatctatcaaaaagttagtgaaacaacaatcatttttaaagtttgtcctttgataatattacaagcaatgaactgcatcttcatttcaagaaaatgatacagtacttcttagctctagctctacacggtttacactgctattatgatttcctatagagctatctttctacatattccacttctctagcagacatgtattttatcagtctatttgaaatttaggggagctttggtgatcgcaacgccatatgctagcggctttgatcatttcttcatcgcagatgaagttcaatttaagtttgacaggtgcttaagaaacatggttgaacctgtaagttgttatttttcacataacaattaactccaatattgtccaatatactaagcaaacattttttttccaggtaaatgaccttcccacatttggtgttgggcattctttgggatctgtgatccaccttctcattggtacgagattataagtgcatatttcggccttgtttagttccaaactttttcttcaaacttccaacttttccatcacatcaaaactttcctacacacataaacttccaacttttccgtcacatcgttccaatttcaaccaaacttccaattttagcgtaaactaaacacacccttcatttatcttctgggctatgaagtattctttatgtaagattaaatttgtgcttgttcagttagcggtgtaatatgttgttttatcactgatgtttgcttctattaggatcaagatacgctgtgcagcgaagtggaaatatattgatggcctttaacaataaggtatgttttttgcgtgttatctcccctccttgttaacactagtaacaatcccatgctttgcaatgggcttatttaattgaggatatatccataccattaggatggatgggaccgtggatcgagtaaagcaccggaagactaactgcttgttcttttttcccctggtttttccttcttttttttcttctttttaggaggcagagattacatttcctggtttttgggacagatatggggaggacagagttgtttttttcgttaactaatcgtcttttcttttcctggttttcttcttttttttctcagttggttagtttttggcacttttttttctctttttttagcgctttttatacgtgagattggaaggggaggaaggaggatgactgtcctttcgaagtagtagagaaaattgcatggcttagggaagacacatacatataggtaaagaccatactagtacactgtagatgaccagggatccatactttattgctttagtttgtatctcttgataagataagtggataactggacattcctcattgagtagatatttaaatttggtaatccatagtaatgcaactttcagagtgaagtaagaacttttgtacgcttcaatctacatggagcgggtacatcagctgcgaagcatgtgatgcggctctgttagtttggtacaaaaatcgtagtgtcataagacacttgcatttagatgttaggacggaatgatgttatctattgtaaccagagcgaaaagaatttttgttccgttcaatctattaattcttttaaaagctactagtagaatattacttgtagtttttcttcttctttctttttcttttgcaggaagcaagcttggcagttccattattttcgcctgtaattgttcccatggcacagagttttgggccaatattttcccagttgacatcatatccaacacttcgttttggggtacgatgtgtttctgaattccattgccaaattgttacgatgattttttatattttatgacaaagtctgttgcttgaatggtctgcaactgttccacatggtggtattattttcttttcatccctgcactgtcattctcatttggacatctcctgtttctggagacgtactatctttcttagtatgtatcacaagtggaacttatggtgttaggtgtaggtgtaagtgacaaagtcggtatctgttcactattctaaaaataggaagttcccaactctaatagaatgttcgagttttatgttggcgagcccctcttcaattttaaactcagtaagcacatagaatttaccaccttgtttcatgttagttacaaagaatttttcctcagatagcaataatatgaaatagaaatggacatggatcattccaactattacacttgaatattgctactgatgccatgtcactctcccaaatacaaatcacatgtttcctatgtgttgattatatgccacttccctcttaagctaagatgattataatccttgcaaaacaggcggaagcagccattaagcaacttgagaatcttagccctcctgttgttaagcagctcctgccattagttcagcaacttcctccactgtatatggatttagtaaaaggccgagaagaattcgttccaaagccagaagagacacgtcggctggtaagttagcttattcgtctctttcaatgcttcagatgcttgcataggatatatgttaacctttcatctacaattgctgtgctgctgttgtaatattatatagaagtgctaaaaagtcaactctaaaacgatgtttttttttcttctatactttctattttaaactaaccaatactaaccactgggttaataaatttgaatagcctctgatatcatatgacataggatgcatccccaactcccccatcaatatcatttattggtgactagcagaatcttctatgcaattcatcacattgcactttttgaaaggatcatcaggcaatggatcatggtggattccccttgcatattttgaggatataggcagagatgtgcccaaatagaagtatacaaaccaaatgaaatcactaattctccagagctgttaaagtattttcaccatcagttctatactaagggtgtgttcaggtgtgcaggatggaaacccatcctgcacgtaaaacggagcggccttttaacatgtgattaattaagtattagttatttttttttcaaaatgcatcaatatgaatttttaaaacaacttttgtatataaaatttttgaaaaaaatgcaccgtttagtagtttgaaaagcgtgcgcgcggaaaacgagagaggtgggttgggaaaatggtgtaccgaactcagcctaacatcagttagcattttgagttgaattttctcggttcaatccaagtctacaaatgtcatttttggcgtgattgatgagtatagaaataaccaataatttgggtagtatgtacatatgtatgaaatgttcagtttgaagtctacaacaaactttaaggaaacaaggaattacgatggcagagttattatattttgatctatatatgagtttgttttaacaaaaaggaagacgtgttgaatatatcaaagctcttactggtgttaccataatctaaaattgacctgacagattagtatgatagtgaaatgcttgcaaagaccatttgctgtgtccactctataattcacactgctgatcttacagcattatttcgcccatcttaatcaaccctcgcagcatgtggctctctttaggtttggacaatcatgaaaatatgcaattcattcagtgcgcaaagatgtatgcaggataagctaaataactagagaactgtccagcaatcaaagaaatgttagcaccttttgtttgtgcatttgtggatgagtaggttggaatattattccctgttctgactcttgtatgatgtatgcccaaacataaaacaagttaaaaggagatatccttaatgttactgggacaaagtgagtaatatgcattaccatgctgcttcagacttgggaggagaaaagaaaaacagagagagaaagagctaactaatccatcacgtttaatgtagttggatttcttgtttgtatgtgatactaaaaataaaaaaagatgtaacttatgttataaatggcagcaaatttattatcatgaagcatttttcaaattattgtgttgtggtttttttttaaaaaaaataccactatataatttatttttatgattgttctaatgcattacacttctttctgcaggtaaaatcctactatgggatttctcgaaacctcttgataaagttcaaagatgatcaaattgatgaaacatctattcttgcgcaagtactaagctccgaatctgccattagctcactgcttgacatgtcaattcggtcacttcctggagatcatggactaccgttacagcaggtgattttcgctgaatatattctcagaattaaaggtgctgacaaatgacaaagcctgtcatgtacagcacgtgctgtccatgaataaagctattgttagactaaagatattattttttgagaaagttattgtatccgtctctcttatttcagctaagtaatcacatatttttccttcaggtacttcctgatgttccaccagcaatggccgatgcagtaaacagaggaggtgaactcctgacaaatctagcaacagggacaccatgggaggctgttgctaaggaggtaggtagcactttaggtgcggattcgggcgttctacgagcacaaatctcaaaggatgtcaatacacttgttgacgtaattgtttcatggattgagtcaaattctggtccaagattacttcgttcatgatgacacccccacaaaggtttagcaggttgggaatgccagtaccaaacgtcaagaggattcaactgacgagtattgcaaactgtagattgcatttcaaccccgacatgctagtggtgtatatatatgctgtacatcgtagcgcatgacttgttgaatgtaatctatcttgatggagtattatgaatgtacatttccattaaaaaaatgtacatttggaaggactagaatagagcgatgagtttatgggtttgtggctgctctgatcctgacaggcactgggggtgcacagtactgcacagtcctgtccgcaaatctacagttcagttttacaagaaatgttcatttggtagcaacggaaggtctatagttctccgaggaaactggccgaggtatgcacccgtgcttatcattcttcgtaaaactgtaattatttgttaaaactatccttttacttcagatgggtatttcataagactgctgcaacaacaacagcaacaacagttgattttatcacatatgggctcgacttaccctgatataaagtattgcatgtgtgtatgatatatgtactcaaaacttttcaggtgaataatgtaagctttttgataaagtcatacactattgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0405600, RefSeq:Os04g0405600