Difference between revisions of "Os04g0417800"

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(Created page with "{{JaponicaGene| GeneName = Os04g0417800| Description = WD40-like domain containing protein| Version = NM_001059305.1 GI:115458339 GeneID:4335815| Length = 4933 bp| Defini...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0417800|
 
GeneName = Os04g0417800|

Revision as of 19:52, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0417800

Description

WD40-like domain containing protein

Version

NM_001059305.1 GI:115458339 GeneID:4335815

Length

4933 bp

Definition

Oryza sativa Japonica Group Os04g0417800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20662751..20667683

Sequence Coding Region

20663019..20663524,20663653..20663746,20663865..20663941,20664053..20664104,20664186..20664343
,20664607..20664697,20664881..20665945

Expression

GEO Profiles:Os04g0417800

Genome Context

<gbrowseImage1> name=NC_008397:20662751..20667683 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20662751..20667683 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccaagttccgaatcagacagggatgatatcttctttgatgcatttgatgatgttacttcaacaagggagccttcattgtcagatgattgcagcacaagtgacgaaggattagcatcaaggagatttgagtatgatatttggggaaacgagccaatgagtgttgaagaaaggcggcaaaggttcctgaagggaatggggtttgatgaatttcttgctaccagagtggatttttctcaaccacagggagaaatcacaactgttggtcctttcgctgacttggggttggaggagagtactaccagtgacatttcttccgtgaattcatctgttcctgagaatgaatcagtttctgatgcctcctgttgcataggagatattgacagtggcgagagatacacagttcagaatgatggatacggcgaattgactagcatgcttaaggatgtggcatcacataaggtggtgtctcttctggagtttgatggcgtaccaggcctttctcaatctgttcaaaagttgttgcgcaaggtgtatagcagttctatggaagagaaaaagaatgtgtttaataagaaaaagggtgtcaagagcttgtggaagagcttcatgaaaaacaggagttttggtggaatttgcaagcacgacgtcaatgtaaaaaactgcacaataggcataccatccagaacaaaagttcaacatcgaaagaaaaaaactatggaattttctgctgtccatctgggtcaagaaatccaagctcacaagggtttaattaaagtcatgaaattcagcccgtcaggctggtatttggcaactggtggtgaggactgcattgtacggatatggcagattatggaagtggaagcatcttcgaagttgcatgggggagacaaccctcagaactatgatgataaaattacaatcatcaaaacggaactaggaagagggaagaatcatgcccttgcagtagtgccaaagaagggtttccgcatttcagagactccattacatgaattccaaggccatacagatgatatcctggatatggcatggtcagagtcagattatctcttgacctcatcaaaagataagatggtgcgtttgtggaaagttggctgtgatggttgtcttggactgtttaaacacaaagactacgtgacatgtgttcaattcaatcctatcgatgaaagatacttcatcagtggttcaatagatggaaaagttcgtgtttgggatgctttggataagagagtagttgactggactgatacacggaagatcataactgctcttagttaccaaccggatggaaagggctttattgttggcactacttctggagaatgccgcttttacgatcaatcaggtgaaaacatccaactagacaaagaattgtttatgcaagggaagaagtctgctgtccatcgggtcaacagtctgcagtcacgttcaagtgattcctctaggattacaataacatcaacgggttccaaaattcgagttgccgatggtgttgatatcattcaaaagtttgaagggccttggaatttgaaggctctttcttcaccatctttaacatcagatggaagatatctcatatctgccggattggattccaatgtctacatctggaactttgacattccaagtgtcgccgatcataaaggcgaagctaaatcggttcgctcctgtgagaaattcttctccaaggacgtgacaaccgcggtaccatggcccgggctgcatcaagaaagacagcaggtgaagaattcttccagcctgactgaagaatccgtcagttcacccattttgcaccgccacggggaacgccgttcccccgcagcgcggtgtttcgctgacggcatgaagggtactccgacatggccggaggagaagcttccacctgcaaaagccgctgatgccccacgactgtctgactgtctctccacgatctcgcctgcttggaacacggtgatcgtgactgcaagtcgagacggtgtgatcaggtctttccacaactacggcttgcctgtgagattgtga</cdnaseq>

Protein Sequence

<aaseq>MPSSESDRDDIFFDAFDDVTSTREPSLSDDCSTSDEGLASRRFE YDIWGNEPMSVEERRQRFLKGMGFDEFLATRVDFSQPQGEITTVGPFADLGLEESTTS DISSVNSSVPENESVSDASCCIGDIDSGERYTVQNDGYGELTSMLKDVASHKVVSLLE FDGVPGLSQSVQKLLRKVYSSSMEEKKNVFNKKKGVKSLWKSFMKNRSFGGICKHDVN VKNCTIGIPSRTKVQHRKKKTMEFSAVHLGQEIQAHKGLIKVMKFSPSGWYLATGGED CIVRIWQIMEVEASSKLHGGDNPQNYDDKITIIKTELGRGKNHALAVVPKKGFRISET PLHEFQGHTDDILDMAWSESDYLLTSSKDKMVRLWKVGCDGCLGLFKHKDYVTCVQFN PIDERYFISGSIDGKVRVWDALDKRVVDWTDTRKIITALSYQPDGKGFIVGTTSGECR FYDQSGENIQLDKELFMQGKKSAVHRVNSLQSRSSDSSRITITSTGSKIRVADGVDII QKFEGPWNLKALSSPSLTSDGRYLISAGLDSNVYIWNFDIPSVADHKGEAKSVRSCEK FFSKDVTTAVPWPGLHQERQQVKNSSSLTEESVSSPILHRHGERRSPAARCFADGMKG TPTWPEEKLPPAKAADAPRLSDCLSTISPAWNTVIVTASRDGVIRSFHNYGLPVRL</aaseq>

Gene Sequence

<dnaseqindica>4160..4665#3938..4031#3743..3819#3580..3631#3341..3498#2987..3077#1739..2803#ggtggacgcgtccaagcagaatcccaaatcccaagccctctctctctctcgctcgctcgcgcaggagcgagagatcccactctctccccaccatttccccccccccccctctgtgtcccctcctcctcctctacacctggttgggcatggcgctgcggcgcgggtggagacgagcggcggcggcggttgttcttcctgccgcctccgtggagtgaaccaccgacgacgacgacgaacaaggtgacgatgggattcgggttttcttaatcttttctagtagtactaagtttgtttccgtttaggatcgattcgtgtggttttagcgtttggaatggcgcagtgatttggtctctctggtttggtttcctgttttaatggaacagttcgaggggagacacgaatagccgattaggaattcgcggattgttttcatcatttttttctcggttctttttatgggaatttggatttttctaggcatgaattttttgtattctgctgcgcaaatttagccgaggatttgtggagttcccccgagaacaaagcactcgcccaccaccgaaaattccggtcgttttaatagagggaaagtttcaaattttcatttctgtcggtacgaaaacgggtgagcttttaactctctcggatcgctttatcgccacgatgatcggatttttgttccttttaatggcgcgcatagtcgagaatctttaatgttctttcaaccccagcaaatcagcaatcccttttctgttcatgttttcattttgctacagccgccagatttatagcactcaattaatgctaaatgattttgaaaagtgcgaaactttaatccgtctgattgcaggttcagtgtactcctaaatcattttattgaaggggaaaaacaaggaaagcgaagagtcaaaatttcttccttttgttttaggcctgcatttctgccacagaatttcgttgtttttttttttcctctctctctttgaacaccttaataaaggacgcggttttaatggccaactactcgcctacgccctgagcctgcgtggccatcggcgtagaggtaggatagccggcgcgcggcggctgcgcacgtcgctgacaggtgggcccgtgctgccagccagccaagcaccggcactgcgcggtagcagcagtttttacggtgccagccgccccctagtcgaaagaatcaaagaactctcttttacttttgtccctttttagcctttctgcgctgtttttagctgttgctttgtctcggttacttgggatctgcgcccccgtgtgggttcttggggttggggttgggctctcctgttcctgttcctgctcctcatgttgggtgggatccccgaggttgggttttgcgtgcgtggttggtgagttattggttcagggaacagttggcgtggggagaggcaaggagcatcctgtgctttgttcttgtttgtttttcttggtaattagatgcttcttctgtttcactgtttgcattttgtattagttgtgctctgtaaatggttaaatttgcaattatcttttatgtccatgtagtccatattgttgtacattaggaggtaatgttgttgtttgctatatatatatcacgaggctgattacctgtgttgccaattgcagatgacattttgagcaccgcgtgctaacttcacagagggtgagagaacccccctctgtgttgattctttttcttgggctagaagtatttcggttagatatgccaagttccgaatcagacagggatgatatcttctttgatgcatttgatgatgttacttcaacaagggagccttcattgtcagatgattgcagcacaagtgacgaaggattagcatcaaggagatttgagtatgatatttggggaaacgagccaatgagtgttgaagaaaggcggcaaaggttcctgaagggaatggggtttgatgaatttcttgctaccagagtggatttttctcaaccacagggagaaatcacaactgttggtcctttcgctgacttggggttggaggagagtactaccagtgacatttcttccgtgaattcatctgttcctgagaatgaatcagtttctgatgcctcctgttgcataggagatattgacagtggcgagagatacacagttcagaatgatggatacggcgaattgactagcatgcttaaggatgtggcatcacataaggtggtgtctcttctggagtttgatggcgtaccaggcctttctcaatctgttcaaaagttgttgcgcaaggtgtatagcagttctatggaagagaaaaagaatgtgtttaataagaaaaagggtgtcaagagcttgtggaagagcttcatgaaaaacaggagttttggtggaatttgcaagcacgacgtcaatgtaaaaaactgcacaataggcataccatccagaacaaaagttcaacatcgaaagaaaaaaactatggaattttctgctgtccatctgggtcaagaaatccaagctcacaagggtttaattaaagtcatgaaattcagcccgtcaggctggtatttggcaactggtggtgaggactgcattgtacggatatggcagattatggaagtggaagcatcttcgaagttgcatgggggagacaaccctcagaactatgatgataaaattacaatcatcaaaacggaactaggaagagggaagaatcatgcccttgcagtagtgccaaagaagggtttccgcatttcagagactccattacatgaattccaaggccatacagatgatatcctggatatggcatggtcagagtcagatgtaagtttttctcttgtatcttactatattgctagcatacgcaattaatcatactcaaattgcttgtctgaaaatacaatttctgtccaatgtctatcaacatggtttcatgtaccataaacatatgttagcatatcttcaatttttcatatgcttactaggtctgaactggtttgactgcagtatctcttgacctcatcaaaagataagatggtgcgtttgtggaaagttggctgtgatggttgtcttggactgtttaaacacaaagactacggtaagcaacatactattatagtgttctttactactaattatttgctctgtatggttttcgggcccagttttccttataaactgagtaaattctcttcttctaaatataaaagttggaacaaagttccgcctcggtttcaaaaaagaattatttgctctgtgttgattatatccttattgcgatgaaagacagtcttataatgttatatgtactttgggctattgcattgactttttttttcattcctttgaaattgttaacagtgacatgtgttcaattcaatcctatcgatgaaagatacttcatcagtggttcaatagatggaaaagttcgtgtttgggatgctttggataagagagtagttgactggactgatacacggaagatcataactgctcttagttaccaaccggatggaaaggtttgaatctgatcaaaatgtagtttgaaatattctgcacaactagatgttaattattaatttgtttttttttcaaaccagggctttattgttggcactacttctggagaatgccgcttttacgatcaatcaggtacatagagctcattgtgcacactacctgcgtgctttctgttagtaatatgactattgtcccaattggtgtgtttgtacgtctaactgagcagttcattttcttgattaggtgaaaacatccaactagacaaagaattgtttatgcaagggaagaagtctgctgtccatcgggtcaacagtctgcaggttgatttctactcctcacttggttcgtttaagatttctttaacagtgatatcgacaagcaataatctccatggagtcgttaatatcattccactaatttgtggttgtcattttgcagtcacgttcaagtgattcctctaggattacaataacatcaacgggttccaaaattcgagttgccgatggtgttgatatcattcaaaagtttgaaggtatatttgctaaacaagatgccatatttcattcctgagaagtctgtcattttataactgtttttcttatacagtaatattttgtggcctcagtactgatatctccttttatataccttctgatgcagggccttggaatttgaaggctctttcttcaccatctttaacatcagatggaagatatctcatatctgccggattggattccaatgtctacatctggaactttgacattccaagtgtcgccgatcataaaggcgaagctaaatcggttcgctcctgtgagaaattcttctccaaggacgtgacaaccgcggtaccatggcccgggctgcatcaagaaagacagcaggtgaagaattcttccagcctgactgaagaatccgtcagttcacccattttgcaccgccacggggaacgccgttcccccgcagcgcggtgtttcgctgacggcatgaagggtactccgacatggccggaggagaagcttccacctgcaaaagccgctgatgccccacgactgtctgactgtctctccacgatctcgcctgcttggaacacggtgatcgtgactgcaagtcgagacggtgtgatcaggtctttccacaactacggcttgcctgtgagattgtgatgatctgcaaatgcaaggcaatcagctttggtatagtctgactctgatttgcgtgcgtgcgtgagtgtgttcgctgaagaagaagctacagaaaactgtagctttggtgatagcctttactaacacagtaaagtttttttgttggtagtagatggtaggaaggtgaggagaggatcttattttttttgtactgcgaattcagaatctgaacttgtggtgcttgtcgaaatgaggtggtcaatccagaagcgttttttccctcttgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0417800, RefSeq:Os04g0417800