Difference between revisions of "Os04g0449100"

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(Created page with "{{JaponicaGene| GeneName = Os04g0449100| Description = Xyloglucan fucosyltransferase family protein| Version = NM_001059463.1 GI:115458655 GeneID:4335986| Length = 2192 bp...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0449100|
 
GeneName = Os04g0449100|

Revision as of 19:53, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0449100

Description

Xyloglucan fucosyltransferase family protein

Version

NM_001059463.1 GI:115458655 GeneID:4335986

Length

2192 bp

Definition

Oryza sativa Japonica Group Os04g0449100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22779869..22782060

Sequence Coding Region

22780017..22781527,22781642..22781891

Expression

GEO Profiles:Os04g0449100

Genome Context

<gbrowseImage1> name=NC_008397:22779869..22782060 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22779869..22782060 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtccttcgatcaggatggcgccggcgccatcgtcgtcgctggcaactgccggtcacggcaagaccaagagcgggcgctcgtcctcatcggccgtgcggccggcgctgctggcgatcgccgtgagcgtgatggttgtgcttctcatggccgtcctcttcggcgcacggtggacgccctccggcggccatggcggcggcgcagacaccagctgggtctcggccggagctcgcgtcgtcttaaacgccgtgtccagccaacaaggcgccgatcccgtcgtgaaggtggcgcagccgcacgaccggctactaggcggcctcctctcgccggacttcaacgacacctcctgcctcagccgctaccgcgcctcgctctaccgccggcgatccctccacgtcctctcgtcgcacctcgtctccgccctccgccgctacgagtccctccaccgcctctgcggccccggcacgtccgcctacgagcgcgccgtcgcccgcctgcggtcgccgtcgtcgtcgaacactacctccgacgctccctccgagtgcaggtacctcgtgtggacgcctcacgcggggctcggcaaccgcatgctctcgatcacgtccgccttcctctacgcgctcctcaccggccgcgtcctcctcttccaccgctccggcgacgatatgaaggacctcttctgcgagccgttccccggcgcgacgtgggtcctcccggagaaggacttccccatccgcggcatggagcgcttcggcatacgcacccgcgagagcctcggcaacgcgctgggccgaggcgagggcggccgtgacccgccgccgccgtggatgtacgtgcacctgcggcacgactacacgcgcccgggcgccagcgaccggctcttcttctgcgacgacgggcaggacgcgctgcggcgcgtcggctgggtggtgctcctctccgacaactacttcgtcccgggcctcttcctgatcccgcggtacgagcgcgagctgtcgcggatgttcccgcgccgcgacgccgtgttccaccacctcggccgctacctgttccacccgagcaacacggtgtgggggatggtgatgcggtaccacggctcgtacctggccaaggcggaggagcgcgtcggcgtccaggtgcgcaccttctcctgggcgcccatctccaccgacgagctctacggccagatcgtctcgtgcgcgcaaggcgagaacatcctgccccgcgtgcgcgagtccagctccggctccgacaacgccaccgccatccctggctccgggcggcagcagcagcagcggccggcgaggcgcaaggcggtgctcgtggtgtcgctgcacggcgagtactacgagaggatcagggacatgtactacgagcacggcgcggcgggcggggacgcggtgagcgtattccagccgacgcacctgggcgggcagcggtcggaggagcggatgcacaaccagaaggcgctcgccgagatgatgctgctcagcttctccgacgtggcgctcacgtcggccgcctcgacgttcgggtacgtcagccacgggctggccgggctgaggccgtgggtgctcatggtccccgtccgcaagaaggcgcccaacccgccgtgccggctagccgccaccgtcgagccgtgcttccacacaccgccgcactacgactgccaggcgaggaccaaaggtgacaacggcaagacggtccggcacgtccggcactgcgaggacctcaaggatggtgttcaattggtggactga</cdnaseq>

Protein Sequence

<aaseq>MSPSIRMAPAPSSSLATAGHGKTKSGRSSSSAVRPALLAIAVSV MVVLLMAVLFGARWTPSGGHGGGADTSWVSAGARVVLNAVSSQQGADPVVKVAQPHDR LLGGLLSPDFNDTSCLSRYRASLYRRRSLHVLSSHLVSALRRYESLHRLCGPGTSAYE RAVARLRSPSSSNTTSDAPSECRYLVWTPHAGLGNRMLSITSAFLYALLTGRVLLFHR SGDDMKDLFCEPFPGATWVLPEKDFPIRGMERFGIRTRESLGNALGRGEGGRDPPPPW MYVHLRHDYTRPGASDRLFFCDDGQDALRRVGWVVLLSDNYFVPGLFLIPRYERELSR MFPRRDAVFHHLGRYLFHPSNTVWGMVMRYHGSYLAKAEERVGVQVRTFSWAPISTDE LYGQIVSCAQGENILPRVRESSSGSDNATAIPGSGRQQQQRPARRKAVLVVSLHGEYY ERIRDMYYEHGAAGGDAVSVFQPTHLGGQRSEERMHNQKALAEMMLLSFSDVALTSAA STFGYVSHGLAGLRPWVLMVPVRKKAPNPPCRLAATVEPCFHTPPHYDCQARTKGDNG KTVRHVRHCEDLKDGVQLVD</aaseq>

Gene Sequence

<dnaseqindica>534..2044#170..419#gagtaaaatgccgtttactgtgcattactccaaccagtattctgatacttgacacacaccaaacgaggtcaaaactaaacattctttgatatatatgcaggacgtgaattgaagcaaggggcatgcagttgtatccattctagcagacacggtccagctgcatgctgtgatgagtccttcgatcaggatggcgccggcgccatcgtcgtcgctggcaactgccggtcacggcaagaccaagagcgggcgctcgtcctcatcggccgtgcggccggcgctgctggcgatcgccgtgagcgtgatggttgtgcttctcatggccgtcctcttcggcgcacggtggacgccctccggcggccatggcggcggcgcagacaccagctgggtctcggccggagctcgcgtcgtcttaaacgccggtacgtatgataacgtccatgccagtacgtgtgcatttggatggttttgtttgttccattttttacgacaaaaaggaggaagaacgaaacgtttcttaccgcgcgtgcatgcagtgtccagccaacaaggcgccgatcccgtcgtgaaggtggcgcagccgcacgaccggctactaggcggcctcctctcgccggacttcaacgacacctcctgcctcagccgctaccgcgcctcgctctaccgccggcgatccctccacgtcctctcgtcgcacctcgtctccgccctccgccgctacgagtccctccaccgcctctgcggccccggcacgtccgcctacgagcgcgccgtcgcccgcctgcggtcgccgtcgtcgtcgaacactacctccgacgctccctccgagtgcaggtacctcgtgtggacgcctcacgcggggctcggcaaccgcatgctctcgatcacgtccgccttcctctacgcgctcctcaccggccgcgtcctcctcttccaccgctccggcgacgatatgaaggacctcttctgcgagccgttccccggcgcgacgtgggtcctcccggagaaggacttccccatccgcggcatggagcgcttcggcatacgcacccgcgagagcctcggcaacgcgctgggccgaggcgagggcggccgtgacccgccgccgccgtggatgtacgtgcacctgcggcacgactacacgcgcccgggcgccagcgaccggctcttcttctgcgacgacgggcaggacgcgctgcggcgcgtcggctgggtggtgctcctctccgacaactacttcgtcccgggcctcttcctgatcccgcggtacgagcgcgagctgtcgcggatgttcccgcgccgcgacgccgtgttccaccacctcggccgctacctgttccacccgagcaacacggtgtgggggatggtgatgcggtaccacggctcgtacctggccaaggcggaggagcgcgtcggcgtccaggtgcgcaccttctcctgggcgcccatctccaccgacgagctctacggccagatcgtctcgtgcgcgcaaggcgagaacatcctgccccgcgtgcgcgagtccagctccggctccgacaacgccaccgccatccctggctccgggcggcagcagcagcagcggccggcgaggcgcaaggcggtgctcgtggtgtcgctgcacggcgagtactacgagaggatcagggacatgtactacgagcacggcgcggcgggcggggacgcggtgagcgtattccagccgacgcacctgggcgggcagcggtcggaggagcggatgcacaaccagaaggcgctcgccgagatgatgctgctcagcttctccgacgtggcgctcacgtcggccgcctcgacgttcgggtacgtcagccacgggctggccgggctgaggccgtgggtgctcatggtccccgtccgcaagaaggcgcccaacccgccgtgccggctagccgccaccgtcgagccgtgcttccacacaccgccgcactacgactgccaggcgaggaccaaaggtgacaacggcaagacggtccggcacgtccggcactgcgaggacctcaaggatggtgttcaattggtggactgagttgcattccattgtccctccgcctgtccatctgcactgttcttcacttgtttgttgttaaagcattaagaaaacatttactgaattgtaatcaagtttgtatgatatgatatttctcaagataagaaactttgcacattagcaagac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0449100, RefSeq:Os04g0449100