Difference between revisions of "Os04g0461800"

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(Created page with "{{JaponicaGene| GeneName = Os04g0461800| Description = Actin-binding FH2 domain containing protein| Version = NM_001059533.1 GI:115458795 GeneID:4336061| Length = 3109 bp|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0461800|
 
GeneName = Os04g0461800|

Revision as of 19:54, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0461800

Description

Actin-binding FH2 domain containing protein

Version

NM_001059533.1 GI:115458795 GeneID:4336061

Length

3109 bp

Definition

Oryza sativa Japonica Group Os04g0461800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23476869..23479977

Sequence Coding Region

23477026..23477676,23477789..23478024,23478146..23478336,23478465..23479888

Expression

GEO Profiles:Os04g0461800

Genome Context

<gbrowseImage1> name=NC_008397:23476869..23479977 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23476869..23479977 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccagttcagccagaggaatcaccctcctctgcctcctcttgatcgtgtcatccactgttctccacttctcgatcggcggcggcagcaatggcgagaagaggagagacgatggtgatggtgacggtgacgatgagaaggtgaggttgttgcttggtgccaacgctctgggcgagcgggataggcggcatgggcatgggcatggaggtggtgtctcttcggcgccggcgccggctccggctccggctcgtgcccacctgccgccgccgctgctgcacaagaacgcgcggctcccggacccggtgcccggtagagtcgggctcgggcacaggagggggaacgccaccgcggcgcacagacggcgcagcgagcgggaagggaagaagagcacgccgcttgtcgtggtcgccgcgggcgccgcgctgtccggcgcggcggcggtgctcctcgtcgtcctcgtggtgttcctggcgtgcaggaggttccagaggagggccatgccgggcgctgaccagagcgggacaaacaaggtgagcttcgatcctggccccgacgtgttctacctggacgccgtcaagccgtacgtcgaggccgaccatggcggcggcggcggtgttgtgaagacggcgccggagttggccgggccgaaggaagagcccaggtgcgaggaggaggacagcggagttgccctgtccgacgacggcgccgactccgtccattcctcgtgctgcttccactcgtcgcacttctcctactccgagctccgggacacgaagccggggagcaatggcgtgtcgccatcgccatccggccggtcaagacgacggagctccgcccctgtgacgccctcagagaagaacaaggctgcgagcccttattcgccgcagtgcccgcgcacgccgagcaacagggagcgatcgtctcgcgcccactccccgagctcgtcggtttcggacttgacatcggtgtcgacatcggtggtcaaggatcatgaagtccggcgagccgtccattccctgatgtttccagaagcgcagagcggcggcgcggggcacgtgaaggaagacgaggcagaatcaggcaatatgaggccgcctcctcctcctcctccgccgccgccgccaccgccgccggcagtaacacagcagcaggatgtcaagacaagctgtggaccggccgttcccccaccgccaccgcctacgcctccgccgccaccgccactgctcgcaccgaaacagcagagcagcggcggcccgatcctcccgccggcgcccgcgccgcctcctctgttcaggccgtgggcgccggcggtcgggaagaacggcgcgccgctgccgaagctgaagccgctgcactgggacaaggtgcgcgccgcgcccaaccggcggatggtgtgggacaggatccgatcgagctcgttcgagctggacgagaagatgatcgagtcgctgttcgggtacaacgcgaggtgttcgacgaagcacgaggaggtgcagagccggagcccctcgctcggccaccacgtcctcgacaccaagaggctgcagaacttcaccatcctgatgaaggccgtcagcgccaccgccgagcagatcttcgccgccctgctgcacgggaacggcctgtcggcgcagcagctggaggcgctcatcaagatggcgccggccaaggacgaggccgacaagctgtccgcctacgacggcgacgtcgacggcctcgtcccggcggagaggctgctcaaggtggtgctcacgataccgtgcgcgttcgcgcgagtggaggcgatgctgtaccgggagaccttcgccgacgaggtcggccacatcaggaagtcgttcgagatgctcgaggaggcgtgcagggagctgatgtccagcaagctgttcctgaagctgctggaggccgtgctcaagaccgggaaccggatgaacgtcgggactgcccgcggcggcgccatggcgttcaagctcgacgcgctgctcaagctcgccgacgtcaagggcaccgacgggaagaccacgctgctgcacttcgtggtgcaggagatgacccggtcgcgcgccgccgaggcggcggacatcgccgcggggctcggcgccgagctcaccaacgtcaggaagacggcgaccgtggacctggacgtgctcaccacctcggtgtccggcctgtcgcacggcctgtcccggatcaaggagctggtcgggagcgacctgtccggcgacgagaggaaccagtgcttcgtggcgttcatggcgccgttcgtcgcccacgccggtgaggtgatccgggagctggaggacggcgagcggcgggtgctggcgcacgtcagggagatcaccgagtactaccatggcgacgtcggcaaggacgaggcgagcccgctcaggatcttcgtcatcgtcagggacttcctggggatgctggagagggtgtgcaaggaggtgaggggagccaagaattgccatggcgggaatcctgccctgaacctgaacaatgtatga</cdnaseq>

Protein Sequence

<aaseq>MSSSARGITLLCLLLIVSSTVLHFSIGGGSNGEKRRDDGDGDGD DEKVRLLLGANALGERDRRHGHGHGGGVSSAPAPAPAPARAHLPPPLLHKNARLPDPV PGRVGLGHRRGNATAAHRRRSEREGKKSTPLVVVAAGAALSGAAAVLLVVLVVFLACR RFQRRAMPGADQSGTNKVSFDPGPDVFYLDAVKPYVEADHGGGGGVVKTAPELAGPKE EPRCEEEDSGVALSDDGADSVHSSCCFHSSHFSYSELRDTKPGSNGVSPSPSGRSRRR SSAPVTPSEKNKAASPYSPQCPRTPSNRERSSRAHSPSSSVSDLTSVSTSVVKDHEVR RAVHSLMFPEAQSGGAGHVKEDEAESGNMRPPPPPPPPPPPPPPAVTQQQDVKTSCGP AVPPPPPPTPPPPPPLLAPKQQSSGGPILPPAPAPPPLFRPWAPAVGKNGAPLPKLKP LHWDKVRAAPNRRMVWDRIRSSSFELDEKMIESLFGYNARCSTKHEEVQSRSPSLGHH VLDTKRLQNFTILMKAVSATAEQIFAALLHGNGLSAQQLEALIKMAPAKDEADKLSAY DGDVDGLVPAERLLKVVLTIPCAFARVEAMLYRETFADEVGHIRKSFEMLEEACRELM SSKLFLKLLEAVLKTGNRMNVGTARGGAMAFKLDALLKLADVKGTDGKTTLLHFVVQE MTRSRAAEAADIAAGLGAELTNVRKTATVDLDVLTTSVSGLSHGLSRIKELVGSDLSG DERNQCFVAFMAPFVAHAGEVIRELEDGERRVLAHVREITEYYHGDVGKDEASPLRIF VIVRDFLGMLERVCKEVRGAKNCHGGNPALNLNNV</aaseq>

Gene Sequence

<dnaseqindica>2302..2952#1954..2189#1642..1832#90..1513#ctcccacgtcctctctctccctgaccctgagccaaagaatctctccatcctccatccttgaaatggtttgatgcctgcaggcatcagccatgtccagttcagccagaggaatcaccctcctctgcctcctcttgatcgtgtcatccactgttctccacttctcgatcggcggcggcagcaatggcgagaagaggagagacgatggtgatggtgacggtgacgatgagaaggtgaggttgttgcttggtgccaacgctctgggcgagcgggataggcggcatgggcatgggcatggaggtggtgtctcttcggcgccggcgccggctccggctccggctcgtgcccacctgccgccgccgctgctgcacaagaacgcgcggctcccggacccggtgcccggtagagtcgggctcgggcacaggagggggaacgccaccgcggcgcacagacggcgcagcgagcgggaagggaagaagagcacgccgcttgtcgtggtcgccgcgggcgccgcgctgtccggcgcggcggcggtgctcctcgtcgtcctcgtggtgttcctggcgtgcaggaggttccagaggagggccatgccgggcgctgaccagagcgggacaaacaaggtgagcttcgatcctggccccgacgtgttctacctggacgccgtcaagccgtacgtcgaggccgaccatggcggcggcggcggtgttgtgaagacggcgccggagttggccgggccgaaggaagagcccaggtgcgaggaggaggacagcggagttgccctgtccgacgacggcgccgactccgtccattcctcgtgctgcttccactcgtcgcacttctcctactccgagctccgggacacgaagccggggagcaatggcgtgtcgccatcgccatccggccggtcaagacgacggagctccgcccctgtgacgccctcagagaagaacaaggctgcgagcccttattcgccgcagtgcccgcgcacgccgagcaacagggagcgatcgtctcgcgcccactccccgagctcgtcggtttcggacttgacatcggtgtcgacatcggtggtcaaggatcatgaagtccggcgagccgtccattccctgatgtttccagaagcgcagagcggcggcgcggggcacgtgaaggaagacgaggcagaatcaggcaatatgaggccgcctcctcctcctcctccgccgccgccgccaccgccgccggcagtaacacagcagcaggatgtcaagacaagctgtggaccggccgttcccccaccgccaccgcctacgcctccgccgccaccgccactgctcgcaccgaaacagcagagcagcggcggcccgatcctcccgccggcgcccgcgccgcctcctctgttcaggccgtgggcgccggcggtcgggaagaacggcgcgccgctgccgaagctgaagccgctgcactgggacaaggtgcgcgccgcgcccaaccggcggatggtgtgggacaggatccgatcgagctcgttcgagtacgtacacccaaaacccaccccatctcccctacgactacgaacgagctcgaggtgttcgacacttcgaccacacgagcgtacacgttttcgcgccacacgctgatcaaaccacgtctgattcgcaggctggacgagaagatgatcgagtcgctgttcgggtacaacgcgaggtgttcgacgaagcacgaggaggtgcagagccggagcccctcgctcggccaccacgtcctcgacaccaagaggctgcagaacttcaccatcctgatgaaggccgtcagcgccaccgccgagcagatcttcgccgccctgctgcacggtaaccaaaccgcacggcacgatcgagcacgaatcaacaccgtcctgcacggcacagttggtgtgtgtgtttaatttgagttttttctttctttctcttggtttggatggattggtcgcagggaacggcctgtcggcgcagcagctggaggcgctcatcaagatggcgccggccaaggacgaggccgacaagctgtccgcctacgacggcgacgtcgacggcctcgtcccggcggagaggctgctcaaggtggtgctcacgataccgtgcgcgttcgcgcgagtggaggcgatgctgtaccgggagaccttcgccgacgaggtcggccacatcaggaagtcgttcgagatgctcgaggtgaatcttggggtgttcgtcgcaatggcggtcttactgattctgcagctttgtgattatactattaagattctgagtttggaaatggcgtgtcgttcttggtgtctggaaggaggcgtgcagggagctgatgtccagcaagctgttcctgaagctgctggaggccgtgctcaagaccgggaaccggatgaacgtcgggactgcccgcggcggcgccatggcgttcaagctcgacgcgctgctcaagctcgccgacgtcaagggcaccgacgggaagaccacgctgctgcacttcgtggtgcaggagatgacccggtcgcgcgccgccgaggcggcggacatcgccgcggggctcggcgccgagctcaccaacgtcaggaagacggcgaccgtggacctggacgtgctcaccacctcggtgtccggcctgtcgcacggcctgtcccggatcaaggagctggtcgggagcgacctgtccggcgacgagaggaaccagtgcttcgtggcgttcatggcgccgttcgtcgcccacgccggtgaggtgatccgggagctggaggacggcgagcggcgggtgctggcgcacgtcagggagatcaccgagtactaccatggcgacgtcggcaaggacgaggcgagcccgctcaggatcttcgtcatcgtcagggacttcctggggatgctggagagggtgtgcaaggaggtgaggggagccaagaattgccatggcgggaatcctgccctgaacctgaacaatgtatgataccgcaaatattggggtgaaagaacaacattgtaattcttggcttcggattgttcttgacatgatcttgccagattagaacagatcagttcgtttagattacaagcatccagctcttcatctatccgaagttccgatgtgcattgcacaatcatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0461800, RefSeq:Os04g0461800