Difference between revisions of "Os04g0492300"
(Created page with "{{JaponicaGene|
GeneName = Os04g0492300|
Description = Similar to DNA-directed RNA polymerase II largest chain|
Version = NM_001059710.1 GI:115459149 GeneID:4336254|
Lengt...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0492300| | GeneName = Os04g0492300| | ||
Revision as of 19:55, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os04g0492300 |
|---|---|
| Description |
Similar to DNA-directed RNA polymerase II largest chain |
| Version |
NM_001059710.1 GI:115459149 GeneID:4336254 |
| Length |
10874 bp |
| Definition |
Oryza sativa Japonica Group Os04g0492300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:24991781..25002654 |
| Sequence Coding Region |
24992143..24992213,24992328..24992457,24992619..24992768,24992855..24993010,24993156..24993338 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:24991781..25002654 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:24991781..25002654 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgcggccggaggagaagctgcggtgcacgaaggagcccttcatcgaggatgtcggcacgcggaggataaagagcatccggttcagcatgttctcggggaacgaggtgcgccaatccgcggaggtgcaggtttggaacagccggatctacaaccatgagatgaagccggtgcccaatggattgctcgacacgcggatgggtgcggcaaacaagcttggggagtgcagtacttgccatggttcatttgctgaatgcccgggtcattttggttacttgaagctcgcccttccagtttttaatgttggattctttaactgtattttggatgtattgaagtgcatctgcaagagctgcagcagggttcttcttatggagaaagatcggctagagtttttgaagaaaatgagaaatcccaaagcagatccgctacagaaaagtgctatcatgaaaaaagtgagggacaaatgcaaactatcccgttgcccctggtgtggattcataaatggtgttgctaaaaagggcagagcagggttgattattcttcatgattgtagcaaaacattggatggaagcacagaagagcttcgggacgcactatcacataagaaagagaaactatctattagtgctgttcgcatgctagaccctgcaattgttctatctcttttcaaaagaatgaccgatgaggattgtgagttgctaaacctcggtgataggcctgagaaacttattgtgacagagattgcagtgccacctgtacctatacgtccttctgttttcgtggctggtggaagaatgagcaatgaagatagcattaccgtcatattgaagagtattgctaatactaattccatccttaaggagaaccttcaaactggtggtcagttcatgaagtgctttgattgctggcaacaccttcaacttcaagttgttgaatatatcaacagtgacgcaccctctcttcccgagtcacaacatcgaggccttgttcagcgactcaaagggaagacaggccgatttcgtggtaacttgtctggaaaacgtaccgagtacactggaaggactgtcatttctcctgatccaaacttgagaataacagaggtggctattcccatcctgatggctcgagttttgacttatcctgaaagagtttcatactataacatagagaagctgcgtcagtgtatacggaatggtccacacaaacatccaggggcaaatttcatcatacaacctgatggaacaaagctgcacttaaagtattgcgatagaagaattgctgctcgagatttgaagtatggctgtgtagtcgaaaggcatttagaagatggagacattgtcctcttcaatagacaaccgagcttgcatagaatgtcaattatgtctcacagggctaggattatgccctggagaacactaaggtttaacgagtctgtctgtaacccatataatgctgattttgatggcgatgagatgaatttgcatgttcctcagactgaggaagcccgcactgaagcgcttatgctcatgggggttcagaacaatttatgtaccccaaagaatggggaaatactggttgcatccacgcaagactttttgacttcctcttttctggttacaagaaaagataacttttatgacaggtcgtcattttctctcttatgttcatatcttggtgatgcaatggaaaacattgatttgccaacacctgctctgattaagcctattgagctttggactggtaaacaactcttcagtgtgttagtacgtcctaacgcatgtacaaaggtgtttctgaatcttactgttaaagagaaaatttataagactcctaagggttcaactctggaacctgaagcaatgtgtcccaatgatggttttgtctacttccgaaacagtgaacttctatctgggcaagttgggaaggccactttaggtaatgggaataaggatggcatgttctccactcttgtaagagattataattctcatgctgcggcaagctgtatgaaccgcttggcaaaatttagtgcaagatttatagggaaccatggtttctcaattggtgtggacgatgtccaaccgggagaacatttaaaccaagagaagaaaatgaaaatagatggagggtacaaagattgccatgatcttattgcttcctattccaaaggtgcactccgtttgcagcccggttgcaacgcagcccaaacattggagcaaagtataactcgtgtactgaatgaaatcagagaagaagctggaaaagtctgtatgaatacacttcactggaggaacagcccattgatcatgtctcagtgtggatctaaaggttctccaatcaacattagtcagatggttgcatgtgttggccaacaatcagttggagggcgtcgtgccccgaatggcttcatagatcgaactcttccccactttcctataaattcaaagactcctgcagccaaaggctttgtcgctaattctttctatactggcttgactgccaccgaattcttcttccatacgatgggtgggcgagaaggtcttgttgatacagcggttaaaacagctgaaacaggatatatgtcccgcagattaatgaagggattggaagatctctcagttttctatgatcagacggtccgcaatgctagtggtggtattgtacagttcctctatggagatgatggcatggatcctgcaaagatggaagggaaagatggaaagcccttaaatttggatcaattgtttatgaaagtcatggccacttgtcctcaaaggggacagaatacattatctccaggtgaaatcttacaaattttaaatgacaagctctctgaacatgatgcctcctctgatgatggttgtagcgaaaagttcaagcaactgttaacgtattttcttgaggatcgtataaaattgctgaagagcacaaggagagcgcttctcctagatgaagatcatgttggagagaggcactccagctttgaagaatccattgctgctaatatttctggtatatctgtgaagcaactacaggttttcttggacacatgtttatctcgttaccacttgaagaaaattgaagccggagcatcaattggggcaattggggctcaaagtattggagagcctggaactcagatgacattgaaaactttccattttgcaggagtagctagcatgaatgttactcttggtgttcctcgcatcaaggaaattatcaatgctgctaaaaagataagcacacctattatcactgctgagttactttctgagaaggatgtgttgtctgcacgcattgtgaaaggctctatggaaaaggcagtgctgggtgaggtggctgaagccataaagattgtgttgaaatcaagtcaaccaaacttggttgttaaactcgatatgcaacgtatagaagccctgcacatgggcatctctgctgactctgtgcagctgtcaatattgaatcatccaaaaataaagctaaaatctgagcatgttcgtgttattgataaatccaagttgagaatttatccagctggaatagataagtccaaacttctatatgagttacatcatctcaaatccatgcttccaaaagtgatcgtgaagggtattccaactgttgaaagagctgtgatcagcgaaactggtgaagaaaatgacaaaagatacaagttgttggttgagggaacaaatctcttggcagtaatgggtactccaggagttgatgctatgaaaacaaaaagtaaccacatcatggaagtgaaccgaacactcggaattgaagctgcgaggagatctattattgatgaaattcagtatacaatgaaaagtcatgggatgaacattgattcgagacatatgatgcttctggcagatttgatgacatacaagggtgaaattcttggcattactagatatggtattgcaaaaatgaaaagtagtgtgctgatgctggcttcgtttgagaaaacagcggagcatctctttaatgcatcatacagtggtcgtgaggatcagatagagggagttagtgaatgcattatcatgggtatacccatgcaacttggcactggtattctcaaagtcagacaaaggcttgaccatttgcctgaatttaaatatcagcctgatccaatattggcgtga</cdnaseq> |
| Protein Sequence |
<aaseq>MARPEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQ VWNSRIYNHEMKPVPNGLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNV GFFNCILDVLKCICKSCSRVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCKLS RCPWCGFINGVAKKGRAGLIILHDCSKTLDGSTEELRDALSHKKEKLSISAVRMLDPA IVLSLFKRMTDEDCELLNLGDRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVI LKSIANTNSILKENLQTGGQFMKCFDCWQHLQLQVVEYINSDAPSLPESQHRGLVQRL KGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEK LRQCIRNGPHKHPGANFIIQPDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLF NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL MLMGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDNFYDRSSFSLLCSYLGDAMENI DLPTPALIKPIELWTGKQLFSVLVRPNACTKVFLNLTVKEKIYKTPKGSTLEPEAMCP NDGFVYFRNSELLSGQVGKATLGNGNKDGMFSTLVRDYNSHAAASCMNRLAKFSARFI GNHGFSIGVDDVQPGEHLNQEKKMKIDGGYKDCHDLIASYSKGALRLQPGCNAAQTLE QSITRVLNEIREEAGKVCMNTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGR RAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKT AETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGKDGKPLNLD QLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHDASSDDGCSEKFKQLLTYFLEDRI KLLKSTRRALLLDEDHVGERHSSFEESIAANISGISVKQLQVFLDTCLSRYHLKKIEA GASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITA ELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGIS ADSVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHLKSMLPKVIVK GIPTVERAVISETGEENDKRYKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGI EAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLML ASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLPEFKYQP DPILA</aaseq> |
| Gene Sequence |
<dnaseqindica>363..433#548..677#839..988#1075..1230#1376..1558#1691..1803#1900..1999#2654..2854#2930..3078#3153..3294#3380..3520#3627..3815#4151..4364#4727..4820#5200..5434#5771..5962#6448..6546#7238..7441#7523..7798#8035..8182#8474..8625#8982..9137#9215..9331#9407..9486#9702..9906#10014..10216#10411..10462#atctagggtcccgcgccgccgccaactctcccccgttcctcccctttccgcgcgagcggcgagccggcgggcggcggctgtcggaggttcgcctcgcctcgcctcctctcccgcgccgccggcgagaaggcccgtaggtgcgttgtgtacggtttcctctccttctccacctcgccctagcctcctctctctctccctctccctcgccctaagcccctacaaaaccccagctccattccccattgctaccgtcacctctccctctccccttcctactctgcctcctccgccaggttttcacgatccgaagcggctccggctcgcgaacggcggcgtcgagcggagcccagtcgggaggggagatggcgcggccggaggagaagctgcggtgcacgaaggagcccttcatcgaggatgtcggcacgcggaggatgtaaggccccgtcggtccggcgtgttttcatcgtcgtcgtcgtcgtcgcgctgcggttgtgtttactgacttttggttttgttttctgattcgatttgaaccaatccggttcagaaagagcatccggttcagcatgttctcggggaacgaggtgcgccaatccgcggaggtgcaggtttggaacagccggatctacaaccatgagatgaagccggtgcccaatggattgctcgacacgcggatggtaaatgcgtgttgcccttcgagtttctcattgattgcagatgtttgagcaaatgtggtttcatttgcttcatcataggaaggcagctgggctatgctttccggatcctgtttcatggttcattgttgttcttttttatacaacatttcatataatttcagggtgcggcaaacaagcttggggagtgcagtacttgccatggttcatttgctgaatgcccgggtcattttggttacttgaagctcgcccttccagtttttaatgttggattctttaactgtattttggatgtattgaagtgcatctgcaaggtatcactgcacgaataagattagatgttttgtctaaatccaccaaatgtgattattcttatacttgttccataatttatttaaagagctgcagcagggttcttcttatggagaaagatcggctagagtttttgaagaaaatgagaaatcccaaagcagatccgctacagaaaagtgctatcatgaaaaaagtgagggacaaatgcaaactatcccgttgcccctggtgtggattcataaatggcaagctactttctgatactcctttttatcctcggctcctcgccacttaaattttccttaggatggcttactaatggtcacctgactgctgtcaacattttacagaacatttctcacttttgcgtttctttggttggtagtacaggtgttgctaaaaagggcagagcagggttgattattcttcatgattgtagcaaaacattggatggaagcacagaagagcttcgggacgcactatcacataagaaagagaaactatctattagtgctgttcgcatgctagaccctgcaattgttctatctcttttcaaaagaatgaccgatgaggtagatcctatttttttgtctttcaagattactattttatgagagtaccacaatttgtattgtacagactacagatttgttcgattagttttatgtatgttttctctcactttgatattatgcactctacaggattgtgagttgctaaacctcggtgataggcctgagaaacttattgtgacagagattgcagtgccacctgtacctatacgtccttctgttttcgtggctggtggaagaatgaggtttgctcttcagttttttagtacctatatgtcaaatggtgattcagcataaccacattttccttttaatgcattgaattgtcttgcttcccacagcaatgaagatagcattaccgtcatattgaagagtattgctaatactaattccatccttaaggagaaccttcaaactggtggtcagttcatgaagtgctttgtaagacactcacagctcttcgtttgtttattttctcccatttttttctcttagtgcagtgcaacttctgtatgtttagaattcctttcggatagtttgctagaaactcagaaatcaccttgtctctgtatcttcatgaaacacacagcttgatagacccataatctagtttagggttaatctcaatttgtctgtatggaacctacaaggcaaaatatttaggaaacttgatgatttacacaagtagaaaatatgaaagccagaaatcatattctaacaggattgattattctgtagtaagtcagattgtgactttcctttgatatgcagaattcatgtgggggctggtgtcttatcagcatgacaggttcaaagtattacagttttgaaaatccgacttaagtgtgacaaaatgcttattcctatttagctaactaaattactaagtcagtaactactgtttcaagagaaaaatgcactcgtctctatgaaggaaaacaaccatttagatcattcaaaattgtgttttttatgactctttcacaagagttcctctggtgctatgctatcaaaatattctgactgtacgatatgcattctaacaatttgatattactttaaatgattacatctacttcttttcaatctttgaaggattgctggcaacaccttcaacttcaagttgttgaatatatcaacagtgacgcaccctctcttcccgagtcacaacatcgaggccttgttcagcgactcaaagggaagacaggccgatttcgtggtaacttgtctggaaaacgtaccgagtacactggaaggactgtcatttctcctgatccaaacttgagaataacagaggtacatggcaatatagaagttttttatgttcacttccttgttgatgtttaacgtcatcattaattaacacttcaggtggctattcccatcctgatggctcgagttttgacttatcctgaaagagtttcatactataacatagagaagctgcgtcagtgtatacggaatggtccacacaaacatccaggggcaaatttcatcatacaacctgatggaacaaagctgtaagtcatatcagtaaatgcactgaaattagttataagttcagcgtatatactcaattatcctacatttttaggcacttaaagtattgcgatagaagaattgctgctcgagatttgaagtatggctgtgtagtcgaaaggcatttagaagatggagacattgtcctcttcaatagacaaccgagcttgcatagaatgtcaattatgtctcacagggtataaattgctcttcattacactgcacccgctacatgaaaatgttacctcatattggtcccttgctctttgtatttaatcacaggctaggattatgccctggagaacactaaggtttaacgagtctgtctgtaacccatataatgctgattttgatggcgatgagatgaatttgcatgttcctcagactgaggaagcccgcactgaagcgcttatgctcatgggggtagcatttgctaactctttctttttacagttgaccatctttttttttttttgatgttctaccactattctgtagctaatattcaaaatcattaatacttttgcaggttcagaacaatttatgtaccccaaagaatggggaaatactggttgcatccacgcaagactttttgacttcctcttttctggttacaagaaaagataacttttatgacaggtcgtcattttctctcttatgttcatatcttggtgatgcaatggaaaacattgatttgccaacacctgctctgattaaggtaaggctttttcataggaacgcactttgcaagtatcagattgaagacatgctatttcttaatgcttcaaccaatgtttgtcattaataggagatattatttgggcatgggggacagcatgccatcacttttatttgacttcgacagtattatcaaactggattactttgtcatataagttttagtaatttttgtagtgaatttcagcattattatgcataacaagaggcagtaccttgtctcttttccagctgcgcctttgtgcatcttagctttctcatcaaattcctgatttctctgtatactgattcagtgattatgttctccttgtacagcctattgagctttggactggtaaacaactcttcagtgtgttagtacgtcctaacgcatgtacaaaggtgtttctgaatcttactgttaaagagaaaatttataagactcctaagggttcaactctggaacctgaagcaatgtgtcccaatgatggttttgtctacttccgaaacagtgaacttctatctgggcaagttgggaaggccactttaggtgagaatcccacccagtactgattcatagctaaaacgactgccaacctgataatcctaagtactcactctgtcccaaaaatataggtacctctctaatctgagctagaaaggcagctatattttgggatggaggagtatgctatattctctttaggagaacattagtttataggcatggactataaacaatagtcctggcatggtttaccctcttatgaatcaccacatacaataaatgttcctttaatcaggtttggaaaatgtattgttcacttgtgctagttagttgtccttgttattttcatcctgcttgttaaatttggaa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