Difference between revisions of "Os04g0501600"
(Created page with "{{JaponicaGene|
GeneName = Os04g0501600|
Description = HMG-I and HMG-Y, DNA-binding domain containing protein|
Version = NM_001059765.1 GI:115459259 GeneID:4336311|
Length...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0501600| | GeneName = Os04g0501600| | ||
Revision as of 19:55, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os04g0501600 |
|---|---|
| Description |
HMG-I and HMG-Y, DNA-binding domain containing protein |
| Version |
NM_001059765.1 GI:115459259 GeneID:4336311 |
| Length |
6843 bp |
| Definition |
Oryza sativa Japonica Group Os04g0501600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:25437475..25444317 |
| Sequence Coding Region |
25437820..25438324,25438407..25438478,25439009..25439043,25439114..25439182,25439302..25439353 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:25437475..25444317 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:25437475..25444317 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgtcggacggcgcgcagatggaggtggagcggcggcttcgcgacatcggcgcccgcttcacctcgctcccggacgccgacgacgagctgctcagattaatcgaggaggcagaaacctggttggccagggttgaccagtcgccgccggagagcatgcacaaggctctccggccaacaatgagtgctctgattaagaaggagttactggatcacagtgtccctgacataaagcttgctgttgcctcctgtttaacggaggttaccaggatcactgccccggaggccccctatgacgatgatgtcatgaaggatgtatttaccagagttgttgaggcctttgagaagttggatgatatggaaagcccctcctatgcaaggagggttgcgatgcttgaaaccgttgcgaaggtccggagctgtgtcttgatgctagatcttgactgcgacgatctgatacgggacatgtttcaccacttcttcagaaccatatccaatactcatcaagagaatgtcatcacctcgatggaaactgtgatgaagtttgtaattgatgagagcgaagatgtccagcaagatatgccatcctgcctgcttcaagatctagcatcttaccttctgaagaaccttaaaaaggaagaaaaagaaactcttccagcatctttcgaacttgcagagaaggtaattaataagtgttatgagaagttaaagccagtgtttactcctttacttcggggcactcccttggatgagtacagcgaagttgttacatcattgttcgaagatgctttagatgctggagtagccgacaattctgatgcccctggaaaggatatggtggctgatgggaaattatctcataagattgtttcagatgagtcagctcaggaatcatcaaaattagagcaagatgccaattgccctggaaaagacggtactcctccaaacaatacttccacttcggcggttagcaatggttgtgctttaatagacagggtcaagtctccaagtggaccatcctcttctgataagaaggctgaactgccttctgatgacaatcaggcaaaagacactgatgatttgatatccggtgctaaagaaataccagaaccaatcaccacagagcctgaaaagccatctgatcacaatttaaagaaaagccataaacttgatacttccactgattctgaagtggttgatcattctaaggctgttaacaacaacgaggatattttagtctctagggagttatccccagagactgatgatggggataataagctgccaccagagactgggaatagagctgctgatgacaaatcgaaacatgttgataacacacctgctggcaagggaaagcggggccggcctcctgcatcaaagtcgcatgagaagaagaatgttggaaaaggcaaagtatcaggtttagagtctaaaaaagctgacgcagttagtgattctggtggaagggctacaaggcgactagctaaagatgatgatatcaagtcttcattcaaaaagactggtgaaggggaatcttcgaagaagaagcagaaggaaaatttgaaacagcaggaagatactccacccgatgaagacactgatgaggatctcagtttaaaggatatcgtatctcccaagtcttcggccaaaacaggtaaaaacaaaggccaggcaggtgacagtgggggctcaaaaaggaaacgtgcacaggaagctgaagagactccccagcccaagaagaacaaaattcttaaaggaaatcttgttggctcaagaatcaaagtgtggtggcctgatgacagaaagttctataaaggtgttgttgagtcatttgatgttgcttcaaaaaagcacaaggttgtttatgatgatggagatgttgaacgcctacaccttaagaatgaaaaatgggaattcattgatgaggggcgagacaacaatcctgacgcatcgtctgatatgccgcacggcagaaggggtagagttagcttgggtgagcaaacaaaggaaggaaaaatagaaacacccagcagtgggaaacatcgtggcactgatgtcgctgatcctcccaagaaaagaggacgccctaaaggtgtgcgctccagcaatagttcacaaaatgatgacagtcctttgaaggggaaaagtgcagaaaacgatgatgaagatatatccaagacacctaaaagtggcagtgccctcaagaatgaaggtggaagatcatctcgatccactggcaagacaaaggatggcctgctaaagggaagcaacaaggatgagactggtaacactaaaagcgcaagcaaatcaaaaaatgatggtggcagcaaacacaaggattcaaaagatgaagctaaatccagcggatcaaatccaaaaggtgcaagcactcccaaagctgctgatggatccaagacaaatggtctttcgaccaaaagaaagcaaaaggagaaagaaggcgagtcatctgaagaggaagagcatgtgtctgctaaaatttctactggaaagaagcgcagaaggaaggctcataactaa</cdnaseq> |
| Protein Sequence |
<aaseq>MASDGAQMEVERRLRDIGARFTSLPDADDELLRLIEEAETWLAR VDQSPPESMHKALRPTMSALIKKELLDHSVPDIKLAVASCLTEVTRITAPEAPYDDDV MKDVFTRVVEAFEKLDDMESPSYARRVAMLETVAKVRSCVLMLDLDCDDLIRDMFHHF FRTISNTHQENVITSMETVMKFVIDESEDVQQDMPSCLLQDLASYLLKNLKKEEKETL PASFELAEKVINKCYEKLKPVFTPLLRGTPLDEYSEVVTSLFEDALDAGVADNSDAPG KDMVADGKLSHKIVSDESAQESSKLEQDANCPGKDGTPPNNTSTSAVSNGCALIDRVK SPSGPSSSDKKAELPSDDNQAKDTDDLISGAKEIPEPITTEPEKPSDHNLKKSHKLDT STDSEVVDHSKAVNNNEDILVSRELSPETDDGDNKLPPETGNRAADDKSKHVDNTPAG KGKRGRPPASKSHEKKNVGKGKVSGLESKKADAVSDSGGRATRRLAKDDDIKSSFKKT GEGESSKKKQKENLKQQEDTPPDEDTDEDLSLKDIVSPKSSAKTGKNKGQAGDSGGSK RKRAQEAEETPQPKKNKILKGNLVGSRIKVWWPDDRKFYKGVVESFDVASKKHKVVYD DGDVERLHLKNEKWEFIDEGRDNNPDASSDMPHGRRGRVSLGEQTKEGKIETPSSGKH RGTDVADPPKKRGRPKGVRSSNSSQNDDSPLKGKSAENDDEDISKTPKSGSALKNEGG RSSRSTGKTKDGLLKGSNKDETGNTKSASKSKNDGGSKHKDSKDEAKSSGSNPKGAST PKAADGSKTNGLSTKRKQKEKEGESSEEEEHVSAKISTGKKRRRKAHN</aaseq> |
| Gene Sequence |
<dnaseqindica>5994..6498#5840..5911#5275..5309#5136..5204#4965..5016#4483..4565#4283..4384#3125..3859#2997..3047#2026..2217#1793..1943#816..997#477..680#150..257#gctgctctcgccctctcctccccctccccctccccctccagtcccctcgcgaaaccctaactgtctccccctcctcctcctcctcctcctcggggtagatcttcgcgcgggctctcccgctggggcggcaccgcgcgcgccccgccgtgatggcgtcggacggcgcgcagatggaggtggagcggcggcttcgcgacatcggcgcccgcttcacctcgctcccggacgccgacgacgagctgctcagattaatcgaggtgagcgcccctgaccctgcttttttttttcttcttattattttctctcgcgttgttcgtttctaggttgccgtggagattggagcctggcatgataggatgtactggttgttatattgatgtgaagtttaatcctcgctgtttggatctgtataaatagaatgttttatttatttattaattgggtagaaacttagaactgctcattcgtttatgcaggaggcagaaacctggttggccagggttgaccagtcgccgccggagagcatgcacaaggctctccggccaacaatgagtgctctgattaagaaggagttactggatcacagtgtccctgacataaagcttgctgttgcctcctgtttaacggaggttaccaggatcactgccccggaggccccctatgacgatgatgtcatgaaggtaaatgtcttcttgtcgtcatggaattgttgtgcttgcttgtagtgacccttgtcactggctctgctgcaagatttatcgctacggaattgttgtgcctgctcacactgaccattgtcacttgctttgttgcaggatgtatttaccagagttgttgaggcctttgagaagttggatgatatggaaagcccctcctatgcaaggagggttgcgatgcttgaaaccgttgcgaaggtccggagctgtgtcttgatgctagatcttgactgcgacgatctgatacgggacatgtttcaccacttcttcagaaccatatcgtgtgtaacttcttttgctggttcatttcgtattttcttcaccttgagaatgccgattctttcgggttcttaaattgactagggatatgttgtggttctggtattgacttgcaagatgcctgattaatattatgctgctaatttggcatgattatgtacatggagaagaagttagaactgcatttgcaattacactcaccagttaagattactttaagggaaacatcatgtattagtattactatggtttgtcgatatcattgggcgttgttgcgtttgattttttacttgaagcaccaaattgaccgcagctatcagttctgattgcaaatctttggggaataacattttttacatgcatatcgatgctaaattttacataccgaggagttgccatatcccattccccagtttttcattgttagcttatgttcatcatttattttaaaaccgacaagcggttgttccctgcgtaaaatataatggcacaatctgccatgaagtaattttaatcctttgttgtcctctgtctgtttgtctagaacctgctaatttctgcttttctcttatcacataataatgtgcaaaagcatgcatgatgatttgttccaacaagtttacacagttcacaatttgctttgacgtgaaaactcataaagtcacaatagttcctatgtgttttcctgtgtatatttgctttatgtctatgttcatggttctgccctgcgtatgttctgttaattttcttaagtcttctttatcctataattcattactttgttatatttatttcagcaatactcatcaagagaatgtcatcacctcgatggaaactgtgatgaagtttgtaattgatgagagcgaagatgtccagcaagatatgccatcctgcctgcttcaagatctagcatcttaccttctgaagaaccttaaaaaggaagaaaaagtaattcgaattcacttacatctttcatattaaaattaatagatctgatcatcttcactaaaatttcaaatttgctctgtaggaaactcttccagcatctttcgaacttgcagagaaggtaattaataagtgttatgagaagttaaagccagtgtttactcctttacttcggggcactcccttggatgagtacagcgaagttgttacatcattgttcgaagatgctttagatgctggagtagccgacaattctgatgcccctggaaaggatatggtcagtcaaactactaacaaatttcctttttgaatattaattaaggtttgctcaccatagagttagtgcattttgtggcattctcaatgtattttcagatgtgttcaaatgggcaaagactgctcatgttctttttattagaggtggtcaacctttaacacatatttttagtcttacacattgagttcaactatttgctactggaaatggttagatctgtcactctatagaggtataatatggtttatgctatatagccaccactgggacttgggagaggaacacgagacatagaaatgttttgacaggcatttctttgtatgatcaactgtattttaatttaaatatcatgctgtatataaactattttgacaggcaattctatggcattctttctggagtaatatgtatgttaaatttaaaatgtcacgttgcccatcaggtaataactagaatttggaccctggaatgctgtcttagcggttgaaagttatattgactgaaaaagtatcaactgtgaaatatcaagcagtggtcttgggattaattttgtttttttggtgttattcaaagatatgcttgattgtatgttagtatattttttggtttctggtagagtcaatagaatggtccatgacctggtgttatcaactgtgtgatctgtaaaagtttgtagtgtaaattctctcaatctgatatgatatcataccggccaatgttcttctgatatactaattagtttatttcagccaagctgactatgaaagcttgtgatgcaggtggctgatgggaaattatctcataagattgtttcagatgagtcagctcaggtatgtcgctactgacattcaatctgaagttcttgaaagtgagatagatatcacaatgaacatattttattccttaggaatcatcaaaattagagcaagatgccaattgccctggaaaagacggtactcctccaaacaatacttccacttcggcggttagcaatggttgtgctttaatagacagggtcaagtctccaagtggaccatcctcttctgataagaaggctgaactgccttctgatgacaatcaggcaaaagacactgatgatttgatatccggtgctaaagaaataccagaaccaatcaccacagagcctgaaaagccatctgatcacaatttaaagaaaagccataaacttgatacttccactgattctgaagtggttgatcattctaaggctgttaacaacaacgaggatattttagtctctagggagttatccccagagactgatgatggggataataagctgccaccagagactgggaatagagctgctgatgacaaatcgaaacatgttgataacacacctgctggcaagggaaagcggggccggcctcctgcatcaaagtcgcatgagaagaagaatgttggaaaaggcaaagtatcaggtttagagtctaaaaaagctgacgcagttagtgattctggtggaagggctacaaggcgactagctaaagatgatgatatcaagtcttcattcaaaaagactggtgaaggggaatcttcgaagaagaagcagaaggaaaatttgaaacagcaggaagatactccacccgatgaagacactgatgaggatctcagtttaaaggtagtttctttgtcaacagtagatgatttgaggttttgctttgcacataggtcgtgcataagtatatcactagcagaaggttggatttctgttttacatattcatagttttatatctgtctgactccatgttctaaggtttcctggtaggagtgttatttagaaatagtggaacctcaaaacattttatgctttccaaaactataacatgttgggtcgatggctctcatatttttaaacttctctgcctttcatccttttaacttcctgattggcttggcaacctgccaccaactattttgtatctacggcgaaattcatagagctttatttgcatttggtgtaaatctgatgggtttgtgttgaaatgtttgtgcatgcgatgatgatgatcgaccacaatgactgttttatcataacgcaggatatcgtatctcccaagtcttcggccaaaacaggtaaaaacaaaggccaggcaggtgacagtgggggctcaaaaaggaaacgtgcacaggaagctgaagaggtatatgcatacttgattcttattgctgttagtgaatagtcttgttgcaagctgatttctgtttcagttgttcaaatctttttctttgctttcatcagactccccagcccaagaagaacaaaattcttaaaggaaatcttgttggctcaagaatcaaagtgtggtggcctgatgacagaaagtaagttctataaccatcatttatgtttctcaaatgtaggagtttgttaagattgtgtttgtaggctaactagtacccattgcttcattggttatgatgatattttcatatgtatgaacattattttctaaataaatttcttgatctagattgacatggcatattcttttgcagacgacgcttcagttgcattattcgttactttgatatgatgtttctaaatatgtaccttttctttaataatatatgcagtacaattattcattctagattgagttacacacctatattttatctatcctggtctcctcactcttttttgctacgatatgtgatttcttacatgagttttactggtgtgttgtttggcttgttctgaatctgtttcttgctctgcaggttctataaaggtgttgttgagtcatttgatgttgcttcaaaaaagcacaaggtgtgcattgggaaatgagctctgacttatgcctttttgctgtccaaatcactacaaatgctagttttttttttgagctcagtttcatctttggataccttcatttttttggcacccaggttgtttatgatgatggagatgttgaacgcctacaccttaagaatgaaaaatgggaattcattgatgaggtatgtccatgcagtttgacgccattatctatcctttctagccactttctgattcatctgctacctgcaggggcgagacaacaatcctgacgcatcgtctgatatgtatgtaaataaatattctactttgcatcatcgatatcctcttaaagttttgatgactttcttagttacatcagcactaaaatcttttatatgattcggattgtcattcctataaacctgcaatctccttatcttgaatctttgatatgggggttcaagatgcttggaatgcttcttgaatgggttaacggagacaaaataagttgctctagcatgaatgaccttgattttctgagctttgagttgtggttgattggattattcccagcatccattatcttcagtttatgtttctaccatatagattataagatttactgtgtttctgtttgtattgtaactttactatttatgatcaggagttccaactgtaatcacataatttatttgttcattttgctgcgacatgcatactgctggcagatgttacctaatgctccagtttcgttcatcatcagctattatcctttataatatggttttgttttctttctttttatatatttgagttctttgatcatttttaccaggccgcacggcagaaggggtagagttagcttgggtgagcaaacaaaggaaggaaaaatagaaacacccagcaggttcttttcatatggatgtgccatattgatccagcctacatgcaacaccttaactgaaactgttgtcttgttttgtatgcagtgggaaacatcgtggcactgatgtcgctgatcctcccaagaaaagaggacgccctaaaggtgtgcgctccagcaatagttcacaaaatgatgacagtcctttgaaggggaaaagtgcagaaaacgatgatgaagatatatccaagacacctaaaagtggcagtgccctcaagaatgaaggtggaagatcatctcgatccactggcaagacaaaggatggcctgctaaagggaagcaacaaggatgagactggtaacactaaaagcgcaagcaaatcaaaaaatgatggtggcagcaaacacaaggattcaaaagatgaagctaaatccagcggatcaaatccaaaaggtgcaagcactcccaaagctgctgatggatccaagacaaatggtctttcgaccaaaagaaagcaaaaggagaaagaaggcgagtcatctgaagaggaagagcatgtgtctgctaaaatttctactggaaagaagcgcagaaggaaggctcataactaatttgctctggccttgtgcagttcttccaaggggtacttatgaggcatgcagtctgaaggtttttggcatgagcagcctagcaatttatatggcttccatcccttggctggttgcctgccaagtcttgccctaatcgaccgtcacgaaacagctggtagttgtagcagttgcagtggtagttgtaatgtaggtgttacttttgttccttgtggtcagctgtgagcctctagcaaatatggtttcttgcttgctgtcgttcaacccttattagattgtattttctgctggagctatttgagacgtcaattttgcagcaagcatgaatggagagaaatgtcgtagttc</dnaseqindica> |
| External Link(s) |
