Difference between revisions of "Os04g0503500"

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(Created page with "{{JaponicaGene| GeneName = Os04g0503500| Description = Leucine-rich repeat, cysteine-containing subtype containing protein| Version = NM_001059775.1 GI:115459279 GeneID:433...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0503500|
 
GeneName = Os04g0503500|

Revision as of 19:55, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0503500

Description

Leucine-rich repeat, cysteine-containing subtype containing protein

Version

NM_001059775.1 GI:115459279 GeneID:4336323

Length

7597 bp

Definition

Oryza sativa Japonica Group Os04g0503500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25525296..25532892

Sequence Coding Region

25525614..25525798,25525880..25526026,25526388..25526459,25526817..25526960,25527101..25527172
,25527653..25527724,25528189..25528260,25528590..25528661,25529878..25529949
,25530119..25530190,25530283..25530357,25530633..25530779,25530907..25531114
,25531670..25531798,25531872..25532078

Expression

GEO Profiles:Os04g0503500

Genome Context

<gbrowseImage1> name=NC_008397:25525296..25532892 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25525296..25532892 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaagtgcttgctctaggaagagaggccagctgcttgttgatgaggaagatctctacagtgcaaggttctccaagagcagcagcttcaagtggctactgcacaccttgccccgcagcggctctgatgtacacaggaaggtgcagggaccagtgcctgtgcggtgcccatcgctaatggagctctgtgtggccaaagtccgcgaggatattgggaagtattctgatttctcgctgctgcctagagatcttagtcagcaggtatttaatgaactggtggagtggaacattctcactgaagagttgcttggagcttttcgtgattgtgcattgcaggacatctgtttggcagactaccctggggtgagggatgcttggatggaagtagcggcttctcaagggcaatcattgttatctgttgatatctcttgctctgatgtgactgatggtggactgaatcaactcaaggattgcatcaacttgcaaagtttgtcatgcaattactgtgatcagatatcggagcatggacttaaaacattgtcaggcctctcaaatgtgacatccctgagctttaaaaaatgttctgctgttactgctgaaggagctaaagcctttgcaaacatggttaatttgggtagcttggaccttgagcgatgtccgaagattcatggtggacttgttcatttaaaaggcttgagaaaactggaaaagctaaatttgaggtattgtaatggcatcacagattctgatatgaaacatttatcagatcttacaaatttgagagagcttcaactttcttgctgcaaaataagtgatcttggtgtttcttatctaagaggtctatcgaagctagctcacctaaacctggagggctgtgcagtaactgctgcttgtttggaggttatttcaggattggcttcattggtattgttgaatcttagtagatgtggagtatatgacgaaggctgtgagcatttggaaggtcttgtcaagttgaaggttctcaatttagggttcaactatattacagatgcctgcttggttcatctaaaagaactgatcaatttggagtgtttgaacttggactcatgcaagattggtgacgaggggctagcacatttgaaaggacttctgaaactaagaagcttggaactttcagacacagaagttgggagcaatggacttcgtcatctctctggcctacggaatttgcagagcatcaatctctcttttacattggttacggacattggcttgaagaaaatttctggcctgaattcactcagatcccttaatcttgataatcgccaaatcacagataatggtttggcagctcttacatgtctcactgggttgacacaccttgatctatttggagctcgtataactgatgctgggacaaactgcttgaaatatttcaagaatctacagtcccttgaggtctgcggtgggttaattacagatgctggagtgaagaatatcaaagacctcaaagctctgacgctgcttaacctatctcaaaatggcaacctcactgacaaatccttagagctgatttcccgcctcactgccttggtctccctgaacgtgtcgaactctcgggtgtcgaattctgggctccaccatctgaagccactccagaacctgaggtccttgtctctggagtcctgcaaggtgaccgcgattgagatcaagaagctccagttggctgccctgcccaatctcgtcagtgtgcggcccgagtaa</cdnaseq>

Protein Sequence

<aaseq>MGSACSRKRGQLLVDEEDLYSARFSKSSSFKWLLHTLPRSGSDV HRKVQGPVPVRCPSLMELCVAKVREDIGKYSDFSLLPRDLSQQVFNELVEWNILTEEL LGAFRDCALQDICLADYPGVRDAWMEVAASQGQSLLSVDISCSDVTDGGLNQLKDCIN LQSLSCNYCDQISEHGLKTLSGLSNVTSLSFKKCSAVTAEGAKAFANMVNLGSLDLER CPKIHGGLVHLKGLRKLEKLNLRYCNGITDSDMKHLSDLTNLRELQLSCCKISDLGVS YLRGLSKLAHLNLEGCAVTAACLEVISGLASLVLLNLSRCGVYDEGCEHLEGLVKLKV LNLGFNYITDACLVHLKELINLECLNLDSCKIGDEGLAHLKGLLKLRSLELSDTEVGS NGLRHLSGLRNLQSINLSFTLVTDIGLKKISGLNSLRSLNLDNRQITDNGLAALTCLT GLTHLDLFGARITDAGTNCLKYFKNLQSLEVCGGLITDAGVKNIKDLKALTLLNLSQN GNLTDKSLELISRLTALVSLNVSNSRVSNSGLHHLKPLQNLRSLSLESCKVTAIEIKK LQLAALPNLVSVRPE</aaseq>

Gene Sequence

<dnaseqindica>7095..7279#6867..7013#6434..6505#5933..6076#5721..5792#5169..5240#4633..4704#4232..4303#2944..3015#2703..2774#2536..2610#2114..2260#1779..1986#1095..1223#815..1021#gagtccctctcctcccccctctctctttctcggcgaggattggctgtgtgattagaggtaatttaatcgcgatagattggtttaactctaatccgggagtttgcttggcctagggtttggtggatttgcgtccctgtgagaatttccatatccaatcgggtaattctccaccaccgtattctgtgtaattctgttgcgattttattgggtgggtgggttggttggttgtcgtgttgatctgcccaactcgtactctctcgatgcttatgtgttattctgggttggaattttgggcattttttttaattttacggtttcttctcccttgatggagtgatttgcagaacagggtgtggaacaatcgaaagtagggtacagtgactgaactattaggggtttgggggatttgataatacgtagatagggttgatgctttgattcgtaagacatggttcatttttcttgagctagtgtcatctgttagttttcctggattgcacttaggattggcagcaatccgtaattattgtaagagcctaggttgcgtgaaagatgaacacacccaccaaaaactgaggactcgtggggtttagtattgtttggcagtatctgtatataatctgataattttaagtcaatttacacgattgtttgatgtgcagaatggggccaaagagagcgaagtctatgccaagtcgtaatcgtgctgggaatggatgacaaagaatcacacagtcacgagctagaatgatatgcgctttttagtccatcaagaagaagtgattggtttgtgatcggtgctcgcatcgtcgccatgggaagtgcttgctctaggaagagaggccagctgcttgttgatgaggaagatctctacagtgcaaggttctccaagagcagcagcttcaagtggctactgcacaccttgccccgcagcggctctgatgtacacaggaaggtgcagggaccagtgcctgtgcggtgcccatcgctaatggagctctgtgtggccaaagtccgcgaggtagtgcttgtggccttggatgattgagttttctgtgtgtattgttgcctgacttgatgaggggtgatttcaggatattgggaagtattctgatttctcgctgctgcctagagatcttagtcagcaggtatttaatgaactggtggagtggaacattctcactgaagagttgcttggagcttttcgtgattgtgcattgcaggtgaagtgcttgatcttgtttggcacgtaattatgactgagctctaaacacgttcgcgaaaaaaatgactcaattctaaacaaggaaaatcaatatggaattattgcaaactctatggaatgcaatcctgacattcccttgtagcagtttctaactttcaatgtagtatcagggaacgaataaaggcatcttgttggaacaattcttactatgttgtaaacgattttatagcttatttttataagctaactcaggaaagtaaactaaaatgtgttggtaaaatttatcctgtaagcaattgaggaaaatccactcaaggaagcctccactgggtactgatactaatagaccagttgagctcacgtgcacagctgctatcttattctgtgtaactcagatgatgcttctatcttcctgctacaagcaagccaagcaatcgctttacttgtgtgccacataaagaaaggaccaaatttggagtatttcttgtttctgggataagttactctgagactagatattgacctcctatgctattcttctacttggtctcaggacatctgtttggcagactaccctggggtgagggatgcttggatggaagtagcggcttctcaagggcaatcattgttatctgttgatatctcttgctctgatgtgactgatggtggactgaatcaactcaaggattgcatcaacttgcaaagtttgtcatgcaattactgtgatcagatatcggagcatggacttaaaacattgtcaggttagtgattttctgatagcctgagagttgagttttcttccatctctatgataagagtggtgtcaatgttcctgatcactagatattctgttcctgtcatttatggtattgctttttaattctgcaggcctctcaaatgtgacatccctgagctttaaaaaatgttctgctgttactgctgaaggagctaaagcctttgcaaacatggttaatttgggtagcttggaccttgagcgatgtccgaagattcatggtggacttgttcatttaaaaggtttcctgctatttcattaatatatcatcacaatgtaaccacagccaacttatttattataaatgcatgatctaattttatcatttaccatgtgttccccgcaccctacaccccaatgaaacagagatatatttatcatccagagcttttatatatctttctttgtaataaatacagggaagactggcatgctacctatttgttcaaacgctactcaatcgtgaatacattttaattatacttctgtcagatccaataataactttctttttcaggcttgagaaaactggaaaagctaaatttgaggtattgtaatggcatcacagattctgatatgaaacatttatcaggtaacacctttatgttgaccatctagtgtcaagcagtgtatgttatcacacatactgatctgcacgtctaataaatacccttttccttgtagatcttacaaatttgagagagcttcaactttcttgctgcaaaataagtgatcttggtgtttcttatctaagaggtatcccagaaataaatttcttccttttccagtggaaccttatctacctaaagctacatccatttgtatctgtaatattctgattaattcgttgtttctattaatataatgacatgaagtttcatctaaagttagcctctgtttcatattttgtatttgttctttacaggtctatcgaagctagctcacctaaacctggagggctgtgcagtaactgctgcttgtttggaggttatttcaggttttgcatcttttccatacgagtgctatgttatcagttcacgcttccatgaaaatgtcttacatttattctagggaagtccttggggtaatttaatttgactgttgaaagggtgccacatctgccagaactcatgtagaataatccattaaattcattaccaaaaatggatatttagggacctgaagaagtgcatgtcatgaaatttcacacatttcttttggttctcattctatatatagtcaactacctcatggatttatccccagagaaatctcttctggtggatttgacatgaaagttttagaaattccctttgcaagttgaatgagaatgacaaagtggctaggtaacttgagagtgtcttgcttctactccctccgtttcacaatgtaagtcattttagcatttcccatattcatattaatgttaatgaatctagacatatatatttatctagattcattaacatcaacatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtactataggactattatgctgcttcttgtaaatgagagatttttttattacttttggtgcttatagatggtaatggaatttcattttattattttcaaaggaaattcattgttgacttgaggcacattttcttcttcttttttcagtcctatatttctctgtgaagcgtaagcttaccatattactgttgcgcagctagcgattagaatgctggtttatagaactctttagttgcctaagatatttctctgtactcagcgtacagtatgtttgacaactctggtgtactgctctttgatgtaatctatttcatgattacatgaacacttaacaagctccctgtttggtgagatcatattttcattaatagaaacaataaggtgttcaacaacgagaggaaatcgggcgggggggggggggggggggtaataagcgcggccatggaggaagaagcagcggtctggcgtgtggctggcctgcccatctgagccaccgctcactaaacggttgccaaacttgttgcgagatatagccccacgccttttgtgttttctttctttctcatttgcttgttttcctttcagcggaagattgtaaagttttaaaaactccctttctcttaatacaaaagatgcacaaggcttttgtgcgtattctcaaaaaagttttcattaatagtgatgttattacaggattggcttcattggtattgttgaatcttagtagatgtggagtatatgacgaaggctgtgagcatttggaaggtaatattataacctctggtcgttgactttttggcgaacacaattctctattatttgcagagcgcattgttttttgtctacaaataggaaattatgccctttgtatgcagatgacaaactaagtagttataaattggttaattctcagtgtacgtctagtcagttcacctaccattttttttcaacaatagttaagatgttttgtgatctacaaataggaacatatgccactttatgtctcgttgtgtaagctgtccatattaagttctgtttcttcatcatacatggttgcacttcttcttagcgttgtcggtggtcttgccttgcaggtcttgtcaagttgaaggttctcaatttagggttcaactatattacagatgcctgcttggttcatctaaaaggtaaatagactcttcattatttatcttcatatgatatttgacatcaatgtagaataatgtttaaaaattagcattctagcatccaaatttgaagcgctgtgatctaagtgacaagtgagtcctgaaatttggtaaagcactgctgtgaaaatccatagaatttgatcactattactcaagaaataacacttatattttcttaatataccagtattctcttgtttctgtcattaaaattgccgatgatatgagactagatgcataccagaatacgcttttgtttcacttttgccatgttgtttttgttcaatatatatgtttacgccgcaccaagtggaaggtgtacccacttgattgtattgatttttctggaaacatgtcagaagtctgacatcattatatactatatatgctaattaacacatgaagtggggagctttcctgatgttcttctgttcttgtagaactgatcaatttggagtgtttgaacttggactcatgcaagattggtgacgaggggctagcacatttgaaaggtgagtttcttagttgtcatgtcttttctttgtttttcctgttatcttgtctatacttatacgaaagatggtagtgtgggacccaccaacagtgaaataagactttgcctatttctacagctagcttatcaggcacaaagctagaaagtgacaacataagttgcatgatgacaatatattagacaataggaataactttttatgggctttaaaatactggcattttgctagtatttcataaaacactgaaggcggagaatcacacaataagcctcatgcagtaagtcgtagtttacttttgtttaatggcatatagtattagtgctttgtaccagactagtccgcaattgtcagtttagcattgactaagtatactttgttccttatggaattcttaattggtttaattgtttgtattactggttacattctttttttttggggtctcaaatcattggtgtacatctctctgtgctgtaggacttctgaaactaagaagcttggaactttcagacacagaagttgggagcaatggacttcgtcatctctctggtttgtttaatcttctgcacaaatgctagtgccattgactttattttttttaaaaaaaatatatgatgtttgaatagttcaagcggtttcagtttttagttattactcacaacagttcttcaactaatatatctcctcaggcctacggaatttgcagagcatcaatctctcttttacattggttacggacattggcttgaagaaaatttctggcctgaattcactcagatcccttaatcttgataatcgccaaatcacagataatggtttggcagctcttacatgtatgtcctcatttttggtaaaattacattgtttaatactggcgtgcatgattgggtttcctgttatgcattagacatggtatcttacccattttagcaatttaattggatatggcatgattgggtgctacgttattttttggggcatgtagagtgttggtcttttttatgtctgtttaggatggtgttcctttcctctcaaggtttgatgtttcgctttaatcaaatggtgattgttgtgcattgtagtaggagtaagaatttggctacaaggttatcgtctgaattctccagttctgtatcgttgtgtagtcctttggttgtattttgccttgaagtgacatttgtttaatgcaggtctcactgggttgacacaccttgatctatttggagctcgtataactgatgctgggacaaactgcttgaaatgtaagtgtgcacataaaaagttggtccatgctaaggttctgtttactagtctggtgattttggattatcggaacaagctagtttactataagagttaagataatggcacgttgggcctttttgcacttgtgtagcaccgagcttatcattgtgcacacataaagcaaatcctattaacctagcattctgtggaactttttttttctcaacccctgctattattagcattgaatatgacagcatcttggtgcatattttactgggaaattattattcccttggaaatttgggggattctcgttatttttatgcatcaaaatatcacgtagcacttaaatctgtttgctaatgcattcttcagatttcaagaatctacagtcccttgaggtctgcggtgggttaattacagatgctggagtgaagaatatcaaagacctcaaagctctgacgctgcttaacctatctcaaaatggcaacctcactgacaaatccttagagctgatttcccgtatgtcttttgcgctcgtcaggaatgaaagcattcaacacacaatttatctatttatttgcatatcttccatgtgtacaggcctcactgccttggtctccctgaacgtgtcgaactctcgggtgtcgaattctgggctccaccatctgaagccactccagaacctgaggtccttgtctctggagtcctgcaaggtgaccgcgattgagatcaagaagctccagttggctgccctgcccaatctcgtcagtgtgcggcccgagtaatctggtagctgcacatgtgtccacatgtaaatatccacctgcttagagcaggacaaatgtacatattcccacaagaacaagctcgagtgatctgtacgtcagtcctgcttgtatcggtgtgtctggtcgccctggtgctgaagggtctgatggatggcctagtggtgaagggctggcacgtatttaggccgtgtaaatatgtagcggtgctgatgggaaggaacaactgtaaatatggcgtgcttcctctgcattttcgatgttatgtaatgtttcgtgttatcgtgttaatgaactggtattgttgcttgacctttt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0503500, RefSeq:Os04g0503500