Difference between revisions of "Os04g0544500"

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(Created page with "{{JaponicaGene| GeneName = Os04g0544500| Description = Similar to Similarities with spP40209 Saccharomyces cerevisiae YMR136w GAT2| Version = NM_001059996.1 GI:115459721 Ge...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0544500|
 
GeneName = Os04g0544500|

Revision as of 19:56, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0544500

Description

Similar to Similarities with spP40209 Saccharomyces cerevisiae YMR136w GAT2

Version

NM_001059996.1 GI:115459721 GeneID:4336558

Length

4115 bp

Definition

Oryza sativa Japonica Group Os04g0544500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27658910..27663024

Sequence Coding Region

27659257..27659606,27659765..27659876,27660009..27660081,27660191..27660611,27661268..27661624
,27662611..27662650

Expression

GEO Profiles:Os04g0544500

Genome Context

<gbrowseImage1> name=NC_008397:27658910..27663024 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27658910..27663024 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaaagcaaggaccttgccgtcattgcggagtcaccagtactcctctctggagaaatgggccaccagataagccagtgctctgcaatgcatgtggctcaagatggagaactaagggttcgctgacgaattacacaccaatgcatgctcgggatgatattgatgctgaggaacctagagctagcaagctgaaacctccaacattgaagctgaaggaacagaagcaactgaagaaaaatccaagccacatcacaatggagaatggaccattttctgatcaaaacttccgtaagatgggagatcctgacctaagtaatcgatctggttctggatcagcactatcatactcagagagttgtgccccctatggcactgctgatgcaagtgaaatgactgcttcagcacaatcacatgcttgggaatcacttgtgccatcaaagagaaggagttgtgtcactcggcctaagccttcacaaatggaaaaacttgcaaaggatcttaattccataatgcatgaagagcagctactttacctttcaggatcctcagaggaggatctaatttaccatagtgcaactcctgtggattcctttgagatgggatatggaagtatgcttctcagaccaaattcaaaatcactggaggaagaatcagaagcaagctctattcctgctgataataagtcatatattactagtgaatcttactcagggtcggtctcatttgtatatagtgaaagcaaggcaacaagcaaccaaaatgttataactgaacagccaaagaagtttctggtgcaaacatcagataatgctagaagggctaatctccatactgaaaatcaggatactctggagaatgcaaactcacctttagtttccctacatatggagggaaaagacagtgaagaaacaagagtaaagaccagtgcttcaaatcgccttacaaagtccaccatgaatcctctgaaaaggcctcatgacacccacttccaaagctccgtagaactaagaggaaccatgaggagtcctaaaagagtttctaaatatggtgatgctatgggtctaaagtgccaagcgtcgtttatgccgaaaccaggcaatggcaaagatttagcctgcagtgacagagcacttaacttattcatgttacccccggataaactatccatgctggttcctcctcagtatgccaacactgattctgatcaagacctgttgctggatgttcctcttaatgctcggcacccagaggccgagcttctttgccagccatctcaactgagctcagtagcccacagctccacctcagaggctgggaatgccggaggagaggggcgccttaagcagccctag</cdnaseq>

Protein Sequence

<aaseq>MGKQGPCRHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGSLTN YTPMHARDDIDAEEPRASKLKPPTLKLKEQKQLKKNPSHITMENGPFSDQNFRKMGDP DLSNRSGSGSALSYSESCAPYGTADASEMTASAQSHAWESLVPSKRRSCVTRPKPSQM EKLAKDLNSIMHEEQLLYLSGSSEEDLIYHSATPVDSFEMGYGSMLLRPNSKSLEEES EASSIPADNKSYITSESYSGSVSFVYSESKATSNQNVITEQPKKFLVQTSDNARRANL HTENQDTLENANSPLVSLHMEGKDSEETRVKTSASNRLTKSTMNPLKRPHDTHFQSSV ELRGTMRSPKRVSKYGDAMGLKCQASFMPKPGNGKDLACSDRALNLFMLPPDKLSMLV PPQYANTDSDQDLLLDVPLNARHPEAELLCQPSQLSSVAHSSTSEAGNAGGEGRLKQP </aaseq>

Gene Sequence

<dnaseqindica>3419..3768#3149..3260#2944..3016#2414..2834#1401..1757#375..414#gcattccttcctccattatttctccatccctttcccctctcctcctctcctctaccttctctctaaaagactggatacagaacaaaaaaaagggaaaaaacagaaagaaaggaaagaaagaagaacacctaccaagcaagtcttggtctttgagttcatgggctgtggaattgttcccaggaatcccctctggctctgaaaagattcacaccgagcaacagttctttgatttttttccccctttgttttgctgaagaattgcttgtacagaactgcttctttcctgtttccgcttggttttccggtgtttattttgttggaattttcttgggccctttcttcttcgcttgtggaggcgaggggagaagagaggcatgggaaagcaaggaccttgccgtcattgcggagtcaccagtgagctctttttttctttctttcataaagttagatttttccttctgcagttctttgtttccttgttttagttctgattccccctagctagtttattttttaggtgatgttttctcccaattatgcatctgggaagagtcttagataaaatcgcaaaaatcttcagaatccgtcgggctgggattcctaatcctttttccctgtggttccctctgtttgttctctgatgattattagctgaaattcattgaaccatcagaagctgtcaggagaactttgtggatatggttgaggtctcggtgtcctttgggtgtaaaattctggacaccaggaacagattatttgattcagatagacacatctagacttgtttgaccatggcagatgtatgctgttagataatttgacagataatgcaataagatgcagttaacagtctattgttcaagataaaaagaaccacctgcttttgccaatcagacattcagagtttcatagaagctgcaactgcagaaatgcttgctgttaggacagtactaaagtgaagatctttgctgtgctgtctagtttgcacaggctgggtcttctctttgcttaaatctcagcagcattataagttctggagttcttagctcttcctagaacagctgcttaattgaaatgatcatctgcatttagtatgcctcaccttttagattagcaaatgaacaactacatggttgtgctaaatattaaaaataacgtctgaaagatgcaatttgagtatgtatgtgactaatcagtaatcactcactgtcactgacaaattattcttctaagttcccttccctgatgccatcctatcctgtagcttcacaagcatgattcttctaaatttgtgataagaattccttatggacactctactaataaactctatacttgtataccacacatattactgcaaatcaattttgtactgttacttatgggaaatgatggaacaggtactcctctctggagaaatgggccaccagataagccagtgctctgcaatgcatgtggctcaagatggagaactaagggttcgctgacgaattacacaccaatgcatgctcgggatgatattgatgctgaggaacctagagctagcaagctgaaacctccaacattgaagctgaaggaacagaagcaactgaagaaaaatccaagccacatcacaatggagaatggaccattttctgatcaaaacttccgtaagatgggagatcctgacctaagtaatcgatctggttctggatcagcactatcatactcagagagttgtgccccctatggcactgctgatgcaagtgaaatgactggtgagtgatctccaattccctggtgtgtttctgttaaaacattttttgttctttccattcttgatgtgtaccatatagtatatgatttggttcagttcaaacaaataatgtttaaggaattgaacttgagctttgagattgatgtcagaagtacattgcttaacatttgtctccaatgtaatgctcatgcagtgctaccctcttataatgcatatgtgattttttcttttcgttggacacaataaagctatcggaaccttttttttggcaacccctcttcagtgttggtttattctttagtccagcattatcaattcataataacttatgctgattgttatatcattaagaaatttgtccatgcattgtgttcagatagcatcaagcctataatatggtgaaaatcatgctttagtaaagaccagtaatccagtacatatgaaacatcattaataatatatgtgtttctatactacatgttagtatgatgaagcacaataaaggccctcagaaaagggatattactccaccaaccataagcattagtttccattctcgaggttccgtatgtaactaaagaattgttttttagctgttctcttacaactttgtttgatatattaataattttattatctgatatcttgccaattcagcttcagcacaatcacatgcttgggaatcacttgtgccatcaaagagaaggagttgtgtcactcggcctaagccttcacaaatggaaaaacttgcaaaggatcttaattccataatgcatgaagagcagctactttacctttcaggatcctcagaggaggatctaatttaccatagtgcaactcctgtggattcctttgagatgggatatggaagtatgcttctcagaccaaattcaaaatcactggaggaagaatcagaagcaagctctattcctgctgataataagtcatatattactagtgaatcttactcagggtcggtctcatttgtatatagtgaaagcaaggcaacaagcaaccaaaatgttataactgaacagccaaagaagtttctggtgcaaacatcagataatgctagaaggtattttacatccttattagcacggaagtttatattgagtattagtttatattgagaattgttgtggaccaatctaaggaagtttttgtttgggatgtctattttggagggctaatctccatactgaaaatcaggatactctggagaatgcaaactcacctttagtttccctacatatggaggtatccagcttatgtatctttttcttgctcagttcaattatcgttatatgtatttttagaacatgtctaacctgaatatatgatcttcaaaaccttggttgcacattttgatagttgtttccctttgtacagggaaaagacagtgaagaaacaagagtaaagaccagtgcttcaaatcgccttacaaagtccaccatgaatcctctgaaaaggcctcatgacacccacttccaaagctccgtaggtcagcagcttctgacctgcatatactgttacttatatttggaaaaaaaaccaatcctatatattcatttcctatttcgtccttagcttaatgtaagtgaaatggagaaaccttctaactttattatttttatctattctttctttttgtgcatacagaactaagaggaaccatgaggagtcctaaaagagtttctaaatatggtgatgctatgggtctaaagtgccaagcgtcgtttatgccgaaaccaggcaatggcaaagatttagcctgcagtgacagagcacttaacttattcatgttacccccggataaactatccatgctggttcctcctcagtatgccaacactgattctgatcaagacctgttgctggatgttcctcttaatgctcggcacccagaggccgagcttctttgccagccatctcaactgagctcagtagcccacagctccacctcagaggctgggaatgccggaggagaggggcgccttaagcagccctagttccagttccagttaacaagcaacttaggaacaggaagtagctgtagtttactttagtttccctggatcatggttccctttatttaccggccactgatggggcgttctgcggtttgttcatgctcttatcgtcgtcgccctggtttactaggcaatgtgcgtctgccaagttggcaaaaattgtgtgttcagctaacacttctagctgtgcttttggagtagacttgtgcttgtttgtagcatatggcttttggagaaggtatataactcaacatggctgtatggaaaagaggtaatctccttatgggtaaaatgaaaaaggaaagaaagatggaagttattaggag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0544500, RefSeq:Os04g0544500