Difference between revisions of "Os04g0598900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0598900| Description = Similar to Wall-associated kinase-like protein| Version = NM_001060281.1 GI:115460291 GeneID:4336862| Length = 2629 ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0598900|
 
GeneName = Os04g0598900|

Revision as of 19:58, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0598900

Description

Similar to Wall-associated kinase-like protein

Version

NM_001060281.1 GI:115460291 GeneID:4336862

Length

2629 bp

Definition

Oryza sativa Japonica Group Os04g0598900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30613581..30616209

Sequence Coding Region

30613657..30614899,30615018..30615177,30615284..30616163

Expression

GEO Profiles:Os04g0598900

Genome Context

<gbrowseImage1> name=NC_008397:30613581..30616209 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30613581..30616209 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtttcctccatggtccttgcacagttgcttctcctctgcttgttatcgctttcctcgagcagttcttcccagatcagcccactcaagtgccccaatagctccgttgatatcccatttcctttcaaaattgccaccaactcaagcttaacgtcaactccaggctttgcgatatcatgtcgtcaaacaggcccaatgattttgctcggtggtaactacagcgtcctcagcatctccctgctcgagggatacgtacgtgtgactggccagaccgtatactcctcccagtgccataacaatagccagggaatcatcgacctcactgccacaaactacatgttctcccacacgcaaaacaagttcaccgccgttggctgtgatgccatggcaatgataagaaacagcagcgatgttgtcggtaacaccaacagcacggtgatgagcagatacagcggggggtgcgtgtcgttctgcgcatcaaatggaagcatcatcagcggcgaatgctccggtgtgggctgctgccagtcgtcagtgcccaaggggctcaacaagctggacttggagttcaccagcatacgggaccagctgatgccacccacgagtgccgtcggtagcggcagcacacggtgcagcaaggcgttcatcgcggagcaggactcgtatgtgttctctaggcatgacctatacaaggacttggggaatctgccgatggtgctcgactggtatatacagggtggcaactgcaaggaggcaagccgcagtcgtcaaacctacatgtgcaaggagaacagttattgctatgaggtggaagatggagctggatatcgctgcaattgctctggaggttacactggcaacccgtacattggatgtgttgatatcgacgaatgcaacgacgggaataactatccatgcacccacaagtgcatcaacatagctggtggttacaattgtacatgcccaatgggcatgacaggagatggcaagaagcaaggcattgggtgtaaaagagatacaacaatgttgtctactgtaggtggaagccttggtttgatggctgttctcattgttcttggcttttggacttactggatagtgaagaagaggaggcttgcaaagcagaaacaacgatacttcttgcaaaatggtggtttgttattgcagcagcagatattcacccaccaagcacctgcaaggatattcaccaccagtgagctcgaagatgcaacaaacaacttcagcgatgaccgtattgttggtcgaggtggatatggtacagtgtataaagggatactatctgatcaaaccattgtggctatcaagaagtcaaagcttgtggatcagagccaaatggagcaatttatcaacgagttgatagttctttcacagattgatcacaaaaatgtggtcaagatattgggctgttgtcttgagactgaagtgcccttactggtttatgaatttatatcgaatggagctctgttccaccaacttcataatacaaatttggtaccaatttcatgggagcatcgtcttaggatagcaactgaaactgcatcagctcttgcaaatcttcacttagcaagaaaggtgccaatcatccatcgtgatgtcaagtctgccaatatactgattgatgagaactacaccgcgaaggtatcagactttggcgcttcaaggctagtcccttccaatcagacacatgtaacaaccttagtccaaggaacattaggatacttggaccctgagtacttttacacaagccaactaactgacaagagcgatgtatatagcttcggtgtggttcttgttgagctattaactagacaaaaaccgatatcttatcataggcaagaggaagggataaatctagcttcacatttcacggcgcttgcccagcagaaccgactacaggagattgtggactgcgtcgtggtgaaggaagctggaatgaggcatgttaatgtggtgtcgcatttgattctgaagtgtttgaagcttaaaggggaagagaggccaaggatggtagaagtagcaattgaacttgaagcgctcagaaggttaatgaaacaacacctgtccctgaaaagtgaaaaggctttgagagagcttatggagcagcaatctgctgaagattgccaagagatgcagttgcttcaagaggagagcggccaggaaaaaatgagtaacattgagccgctgaagttgtaccacagggacagtgcctcggataaatgcatggagagcagtccacttctatcaatggacctcccatggtag</cdnaseq>

Protein Sequence

<aaseq>MVSSMVLAQLLLLCLLSLSSSSSSQISPLKCPNSSVDIPFPFKI ATNSSLTSTPGFAISCRQTGPMILLGGNYSVLSISLLEGYVRVTGQTVYSSQCHNNSQ GIIDLTATNYMFSHTQNKFTAVGCDAMAMIRNSSDVVGNTNSTVMSRYSGGCVSFCAS NGSIISGECSGVGCCQSSVPKGLNKLDLEFTSIRDQLMPPTSAVGSGSTRCSKAFIAE QDSYVFSRHDLYKDLGNLPMVLDWYIQGGNCKEASRSRQTYMCKENSYCYEVEDGAGY RCNCSGGYTGNPYIGCVDIDECNDGNNYPCTHKCINIAGGYNCTCPMGMTGDGKKQGI GCKRDTTMLSTVGGSLGLMAVLIVLGFWTYWIVKKRRLAKQKQRYFLQNGGLLLQQQI FTHQAPARIFTTSELEDATNNFSDDRIVGRGGYGTVYKGILSDQTIVAIKKSKLVDQS QMEQFINELIVLSQIDHKNVVKILGCCLETEVPLLVYEFISNGALFHQLHNTNLVPIS WEHRLRIATETASALANLHLARKVPIIHRDVKSANILIDENYTAKVSDFGASRLVPSN QTHVTTLVQGTLGYLDPEYFYTSQLTDKSDVYSFGVVLVELLTRQKPISYHRQEEGIN LASHFTALAQQNRLQEIVDCVVVKEAGMRHVNVVSHLILKCLKLKGEERPRMVEVAIE LEALRRLMKQHLSLKSEKALRELMEQQSAEDCQEMQLLQEESGQEKMSNIEPLKLYHR DSASDKCMESSPLLSMDLPW</aaseq>

Gene Sequence

<dnaseqindica>1311..2553#1033..1192#47..926#taactttgcagcaggtttagttcctcgttctgataaacaagcacacatggtttcctccatggtccttgcacagttgcttctcctctgcttgttatcgctttcctcgagcagttcttcccagatcagcccactcaagtgccccaatagctccgttgatatcccatttcctttcaaaattgccaccaactcaagcttaacgtcaactccaggctttgcgatatcatgtcgtcaaacaggcccaatgattttgctcggtggtaactacagcgtcctcagcatctccctgctcgagggatacgtacgtgtgactggccagaccgtatactcctcccagtgccataacaatagccagggaatcatcgacctcactgccacaaactacatgttctcccacacgcaaaacaagttcaccgccgttggctgtgatgccatggcaatgataagaaacagcagcgatgttgtcggtaacaccaacagcacggtgatgagcagatacagcggggggtgcgtgtcgttctgcgcatcaaatggaagcatcatcagcggcgaatgctccggtgtgggctgctgccagtcgtcagtgcccaaggggctcaacaagctggacttggagttcaccagcatacgggaccagctgatgccacccacgagtgccgtcggtagcggcagcacacggtgcagcaaggcgttcatcgcggagcaggactcgtatgtgttctctaggcatgacctatacaaggacttggggaatctgccgatggtgctcgactggtatatacagggtggcaactgcaaggaggcaagccgcagtcgtcaaacctacatgtgcaaggagaacagttattgctatgaggtggaagatggagctggatatcgctgcaattgctctggaggttacactggcaacccgtacattggatgtgttggtgagaaatcctcaattcatgtgtttggttgccaatatagtattactggctagcatgccttattctaatatccttttttgctttgtttcctacttttgactacaagatatcgacgaatgcaacgacgggaataactatccatgcacccacaagtgcatcaacatagctggtggttacaattgtacatgcccaatgggcatgacaggagatggcaagaagcaaggcattgggtgtaaaagagatacaacaatgttgtctactgtaggcaagtctcttgcaatctttaatattattctctctttttcgaaattttatcaaccagaacaaacaattgattactacatgaagtagtagtaacttcaagattcaaatacccatttcaggtggaagccttggtttgatggctgttctcattgttcttggcttttggacttactggatagtgaagaagaggaggcttgcaaagcagaaacaacgatacttcttgcaaaatggtggtttgttattgcagcagcagatattcacccaccaagcacctgcaaggatattcaccaccagtgagctcgaagatgcaacaaacaacttcagcgatgaccgtattgttggtcgaggtggatatggtacagtgtataaagggatactatctgatcaaaccattgtggctatcaagaagtcaaagcttgtggatcagagccaaatggagcaatttatcaacgagttgatagttctttcacagattgatcacaaaaatgtggtcaagatattgggctgttgtcttgagactgaagtgcccttactggtttatgaatttatatcgaatggagctctgttccaccaacttcataatacaaatttggtaccaatttcatgggagcatcgtcttaggatagcaactgaaactgcatcagctcttgcaaatcttcacttagcaagaaaggtgccaatcatccatcgtgatgtcaagtctgccaatatactgattgatgagaactacaccgcgaaggtatcagactttggcgcttcaaggctagtcccttccaatcagacacatgtaacaaccttagtccaaggaacattaggatacttggaccctgagtacttttacacaagccaactaactgacaagagcgatgtatatagcttcggtgtggttcttgttgagctattaactagacaaaaaccgatatcttatcataggcaagaggaagggataaatctagcttcacatttcacggcgcttgcccagcagaaccgactacaggagattgtggactgcgtcgtggtgaaggaagctggaatgaggcatgttaatgtggtgtcgcatttgattctgaagtgtttgaagcttaaaggggaagagaggccaaggatggtagaagtagcaattgaacttgaagcgctcagaaggttaatgaaacaacacctgtccctgaaaagtgaaaaggctttgagagagcttatggagcagcaatctgctgaagattgccaagagatgcagttgcttcaagaggagagcggccaggaaaaaatgagtaacattgagccgctgaagttgtaccacagggacagtgcctcggataaatgcatggagagcagtccacttctatcaatggacctcccatggtagtgtacaatatatcaactgaggtggtgtttgaatctcctgaaaatgaaaacaaagataaaaattaagtgttttatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0598900, RefSeq:Os04g0598900