Difference between revisions of "Os04g0640700"
(Created page with "{{JaponicaGene|
GeneName = Os04g0640700|
Description = Similar to Alpha-L-arabinofuranosidase/beta-D- xylosidase isoenzyme ARA-I|
Version = NM_001060573.1 GI:115460875 Gene...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0640700| | GeneName = Os04g0640700| | ||
Revision as of 20:00, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os04g0640700 |
|---|---|
| Description |
Similar to Alpha-L-arabinofuranosidase/beta-D- xylosidase isoenzyme ARA-I |
| Version |
NM_001060573.1 GI:115460875 GeneID:4337166 |
| Length |
6778 bp |
| Definition |
Oryza sativa Japonica Group Os04g0640700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:32987653..32994430 |
| Sequence Coding Region |
32988007..32988578,32988664..32989080,32989177..32989524,32990300..32990397,32990511..32990680 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:32987653..32994430 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:32987653..32994430 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccatggcggcgaggggagtgttggccatggtggtggcggtggcggtggtgtggtgcaataatgtggcgagggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggttctgcgaccggacgaagagcagcgcggcgcgggcggcggacctgctggggaggctgacgctggcggagaaggtggggttcctggtgaacaagcaggcggcgctgccgcggctggggatcccggcgtacgagtggtggtcggaggcgctgcacggcgtctcctacgtcggccccggcacccgcttctcgacgctcgtccccggcgccaccagcttcccgcagcccatcctcaccgccgcctccttcaacgcctccctcttccgcgccattggcgaggtggtgtcgacggaggcgagggcgatgcacaacgtcgggctggccgggctcacgttctggagccccaacatcaacatcttccgcgacccgcggtggggacgcggccaggagacgcccggcgaggacccgctgctcgccagcaagtacgccgtcggctacgtcaccggcctccaggacgccggcggcggcagcgacgcgctcaaggtcgccgcctgctgcaagcactacaccgcatacgacgtcgacaactggaagggcgtcgagcgctacaccttcgacgccgtggtgtcccagcaggatctggacgacacgttccagcccccgttcaagagctgcgtgatcgacggcaatgtggccagtgttatgtgctcctacaacaaggtcaatgggaagcctacctgtgcagacaaggacctcttgtcaggagtcatcagaggggactggaagctgaacggatacattgtgtcggattgcgattcggttgacgtactgtacaataaccaacactacaccaagaaccctgaagacgcagctgccatcacaatcaaatcaggtttggacctgaactgcggcaacttcctggcgcagcacaccgtggcggcggtgcaggccgggaagctgtcggagtccgacgtcgaccgggccatcaccaacaacttcatcgtgctcatgcgactcggcttcttcgacggcgacccgaggaagctccccttcggcagcctcggccccaaggacgtgtgcacgtcgtcgaaccaggagctggcccgcgaggccgcgcgccagggcatcgtcctcctcaagaacaccggcgcgctgccgctctccgccaagtccatcaagtccatggccgtcattggccccaacgccaatgccagcttcaccatgatcggcaactacgaaggtacgccgtgcaagtacacgacgccgctccagggcctcggcgccaacgtcgccaccgtgtaccagccgggatgcaccaacgtcgggtgcagcgggaacagcctccagctcagcgccgccacgcaggccgcggcgagcgctgacgtgaccgtgctggtggtcggcgccgaccagtccgtggagcgcgagagcctggacaggacgagcctcctcctgccaggacagcagccgcagctcgtctcggctgtcgccaacgcctccaggggccccgtcatcctcgtcgtcatgtccggcgggccgttcgacatctccttcgccaagtccagcgacaagatctccgccattctttgggtcggctaccccggcgaagccggtggcgccgccctcgccgacatcctcttcggataccacaatcctggtggaaggttgccggtgacgtggtacccggcgtcgttcgccgacaaggtctcgatgaccgacatgcgcatgcggccggactcgtcgaccggctaccccggccggacataccggttctacaccggcgacacggtgtacgccttcggcgacggcctgagctacaccaaattcgcgcacagcctcgtgtcggcgccggagcaggtggccgtgcagctggccgagggccacgcctgccacaccgagcactgcttctcggtggaggccgccggcgagcactgcgggagcctgtccttcgacgtccacctccgcgtgcggaacgccggcgggatggccggcgggcacaccgtgttcctcttctcgtcgccgccgtcggtgcacagcgcgccggcgaagcacctgctcgggttcgagaaggtgtcgctggagcccggccaggccggcgtggtggcgttcaaggtggacgtgtgcaaggacctgagcgtcgtcgacgagctcggcaaccggaaggtggcgctgggcagccacacgctgcacgtcggcgacctcaagcacacgctcaacctgagggtttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MAMAARGVLAMVVAVAVVWCNNVARAQTPVFACDASNATVSGYG FCDRTKSSAARAADLLGRLTLAEKVGFLVNKQAALPRLGIPAYEWWSEALHGVSYVGP GTRFSTLVPGATSFPQPILTAASFNASLFRAIGEVVSTEARAMHNVGLAGLTFWSPNI NIFRDPRWGRGQETPGEDPLLASKYAVGYVTGLQDAGGGSDALKVAACCKHYTAYDVD NWKGVERYTFDAVVSQQDLDDTFQPPFKSCVIDGNVASVMCSYNKVNGKPTCADKDLL SGVIRGDWKLNGYIVSDCDSVDVLYNNQHYTKNPEDAAAITIKSGLDLNCGNFLAQHT VAAVQAGKLSESDVDRAITNNFIVLMRLGFFDGDPRKLPFGSLGPKDVCTSSNQELAR EAARQGIVLLKNTGALPLSAKSIKSMAVIGPNANASFTMIGNYEGTPCKYTTPLQGLG ANVATVYQPGCTNVGCSGNSLQLSAATQAAASADVTVLVVGADQSVERESLDRTSLLL PGQQPQLVSAVANASRGPVILVVMSGGPFDISFAKSSDKISAILWVGYPGEAGGAALA DILFGYHNPGGRLPVTWYPASFADKVSMTDMRMRPDSSTGYPGRTYRFYTGDTVYAFG DGLSYTKFAHSLVSAPEQVAVQLAEGHACHTEHCFSVEAAGEHCGSLSFDVHLRVRNA GGMAGGHTVFLFSSPPSVHSAPAKHLLGFEKVSLEPGQAGVVAFKVDVCKDLSVVDEL GNRKVALGSHTLHVGDLKHTLNLRV</aaseq> |
| Gene Sequence |
<dnaseqindica>5853..6424#5351..5767#4907..5254#4034..4131#3751..3920#2384..2668#168..575#gaacgaaaataaagaggctttttgctcgcaccgcgccgtccttgtcacgggccgcgctcaccagctcacacacacacactcgcaaccaccgcgctcgccgcgcgcgctctcggcgcgccacggcctatataaagtggcagtggcgaggagcaaggggagcaacgaccatggccatggcggcgaggggagtgttggccatggtggtggcggtggcggtggtgtggtgcaataatgtggcgagggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggttctgcgaccggacgaagagcagcgcggcgcgggcggcggacctgctggggaggctgacgctggcggagaaggtggggttcctggtgaacaagcaggcggcgctgccgcggctggggatcccggcgtacgagtggtggtcggaggcgctgcacggcgtctcctacgtcggccccggcacccgcttctcgacgctcgtccccggcgccaccagcttcccgcagcccatcctcaccgccgcctccttcaacgcctccctcttccgcgccattggcgaggtcagcatgcaacaacacctcccacttcttcttctcttccatgtcaccattttcgatctgcattgcactgcacaacctgcattgcgatttccggtcgcgtttggtgcgatttgacggtggtgcgcgggttggtggggttgggggattcggtgcagtgcggtgcagggtttgatgagagaatgttgcttttttttttttgttcttcttcttttcatcatccatgcaatgtggcaagccacgaaaagccgcaaaagcgcgtcacggattataccattccgcttggtttcctttcgccgtcgcagaccgcgcatttacgctgctgcttgttgccaagctacttccaggttaaaagaagcgccgtaacaataaccatagtaaatttctcccctagaatctactgtagctagcttagaagtactttttacaatgggtacacattttcatatggaaaagcacggtgaaagtaacgcacgttttactatgctcaaaccggcaaaaccactgcgacgaaagaaaaaacaagaatcagatgatagccactgataagtcacacaattagcacatttcatcattttgcacgtcatgtgattcctgtgcttgaaggaaagaatgtgtgtgaacatagtcagtatggtacacgcattgccccagcaacagctgcgatgcaacgcacctatgcatggctgtgcctgcgccgtccaagatttacggcaggatatgctggtgtcccttgtcacgggcgttttgtacgtagcagcggcgttctaggccaggacccccactggaattttagcattccaatatcctatccatctgataattgcataaagggttttattataaaaaagaaaattacatgaagggttaaagagcatttaggtttgcaagcaaggaccacagagaaaaatgggtttaggccaatgaccttgctgcacattgcacccaaagacatgtacagtctttctccatgtgtggattcagagtttcagacatgggcatttcttttctgcgcccaagatgatactgtctcgtggattgcattaattggacgctagcacgctgctcgtcgtcaggagccactgcttagcttcccccccatctgttgaggcgtcactgtctcatggggattaattcagaaatggaggctcaaaaagcttggtccatgatgtataatctgatagtactggtacgtgaggccctctctccgtgcagcttttaccaaagttcagttaatcatcagctccatcggcacctagctcctgtcctcatcgagtttggaaaagtgtcatttttccttccaactcgccaagaacaatgaggtgaacgtcgtaggatattagttagttctcatttccagatttcctgggtacgatcgatttcgtttgggaattagctataacatggactaatcatgtgttcccttgaaactggagacatcagaccatattaagctttgtcccaagaatccagctgcggcatgagacaattcagagtcaggatcatatgcctcgcatcttatcttcggttgcacctaccaaattatttgcagcttgaccacggtctatccggtagcctactccagtactactactagtactgttcttttcttattattttttgttgttgttgttgaaaattcagtactactatctacgagtatgacgcagcgaacatgatgcatgcattgcacgttaatttccagtgaaatgcactgaacattttacaagttggtgaaatggtctgatcggatgaatatttttctgacgagaggatgggaaactgtgtgcgatgtgttctgatttctgaaggtggtgtcgacggaggcgagggcgatgcacaacgtcgggctggccgggctcacgttctggagccccaacatcaacatcttccgcgacccgcggtggggacgcggccaggagacgcccggcgaggacccgctgctcgccagcaagtacgccgtcggctacgtcaccggcctccaggacgccggcggcggcagcgacgcgctcaaggtcgccgcctgctgcaagcactacaccgcatacgacgtcgacaactggaagggcgtcgagcgctacaccttcgacgccgtggtaagctaatccgatcatcttcttgtttctctgatgcattggtaagcaatggccatggcgtgaatgcgccgtgctcgagttgccgttttgcacaattgaatactgcctgctcacctgccatggccgcagcagcaggtgatacacatgcgagtaaatgagctccgcttgctacagtgagaatcagttggtgattgacccatgtagcagcaaccaacctctccctttcgttagtgtaattgaggatgcatctccattttacgtaagtggccaatcaatgttcgagtacagccgttgccgttgattggaccattggatccgtctctctccctgcgagatgacgccgacaatagcatgtagacgaacctctacgacaagttaattaggcccatacggattactttaattttctgtacttactcttcgtggctgcaccactgtgcttgttatttggacagtaacatgctggtttttgcacctgaatagaatactgatcattccacggaaccttaaattaagttagatagctataatttataaacatgggtttttttaactaaggatccaggaatgtatgaacacgtatagataaaacaaattgcagattgttaatttcctcagattctggtttgagttgttgcagttccccgaaatggcagatcttggccatttctacctaccaaaactcataaaaaacactgactttgcacatcgctggcagcgtcgcggcactgttgatacagatgattggttttttattcgcacaagtacagagcacatgactggaaccttttgcttttgtgcatgttaaatttgtgaatgctaatcagataaactaaaaaaaaaatactgcatctaacataatcatgcgtgtcgcatcagaaccagctttttaggcctaaaaagcttatcaatacaatttgatacacccagcattgttggtatgttctaccaaactgaactaaaaattcagtattagaaatgaaaatagaggtagtgggagaagagtagcaatcaccaatgtgtgtggccatgtgttcattgctcatactcgtgtcccaattcgtgttcttgtgaatcttcaggtgtcccagcaggatctggacgacacgttccagcccccgttcaagagctgcgtgatcgacggcaatgtggccagtgttatgtgctcctacaacaaggtcaatgggaagcctacctgtgcagacaaggacctcttgtcaggagtcatcagaggggactggaagctgaacgggtcggtctctccctactcctcttaacacttttagaacttcagccatctgatgctttagagaagattcagagatcttgtaactcttgttctaatggtgtatgttgttcttgcagatacattgtgtcggattgcgattcggttgacgtactgtacaataaccaacactacaccaagaaccctgaagacgcagctgccatcacaatcaaatcaggtactgttcattccttagtcacaaccacctcttaactatatgcattcccatgtagtacagacaatatgcggttgcaggattcgatggtctaacctctgacgagatcaaaccgttgattttcctttaaagtttggtttgattaacgcgattcctagcagctaggcaattatagtacgagttgatatgtgcagtagccatcgggttgttagggagtcttagtgtaattgatgggggcattagcagcgtctttagagcttaataggccttgataacctgcaacctgacctgacgaaattattccaagctgtgtcggtgaacccacggtatcattaggtagcactactgattttcagttatgttcaagtgcagtagtacaagactgctaagtggagtagctcctactgttttccattctgtatctgtcattatagttttgaccaatactgattaccacaggcaaaagagaagttacataattctgctgcattttatcatgtgctacaccgtcacataattttgtcttcaaatttgtgagaacgctataactattagctagtactcctactctgtatcatgaacctatcctcaagtttttcggcactatactgatgaatggaccgaaacagattaatgatttgtcaggcctcaccgtgatgaaaaaactcctcaactgaggaccatttctgttcatactacactaacaaatcttctgcattcaacctttcgtttatttatttttacatttttccttatttgtttgaccaaattgtggcaggtttggacctgaactgcggcaacttcctggcgcagcacaccgtggcggcggtgcaggccgggaagctgtcggagtccgacgtcgaccgggccatcaccaacaacttcatcgtgctcatgcgactcggcttcttcgacggcgacccgaggaagctccccttcggcagcctcggccccaaggacgtgtgcacgtcgtcgaaccaggagctggcccgcgaggccgcgcgccagggcatcgtcctcctcaagaacaccggcgcgctgccgctctccgccaagtccatcaagtccatggccgtcattggccccaacgccaatgccagcttcaccatgatcggcaactacgaaggtgacaccaattctggacaagctgatttgatcggtcaagaagagaattatattctcgtgcactgatcggatgaatgctggtgatgtcatggtgcaggtacgccgtgcaagtacacgacgccgctccagggcctcggcgccaacgtcgccaccgtgtaccagccgggatgcaccaacgtcgggtgcagcgggaacagcctccagctcagcgccgccacgcaggccgcggcgagcgctgacgtgaccgtgctggtggtcggcgccgaccagtccgtggagcgcgagagcctggacaggacgagcctcctcctgccaggacagcagccgcagctcgtctcggctgtcgccaacgcctccaggggccccgtcatcctcgtcgtcatgtccggcgggccgttcgacatctccttcgccaagtccagcgacaagatctccgccattctttgggtcggctaccccggcgaagccggtggcgccgccctcgccgacatcctcttcggataccacaatcctggtgagtgcattgcatctctgaattgttctctttctcagaagaagttttttgacatgtgagctgagctgatcaccatactgttcaggtggaaggttgccggtgacgtggtacccggcgtcgttcgccgacaaggtctcgatgaccgacatgcgcatgcggccggactcgtcgaccggctaccccggccggacataccggttctacaccggcgacacggtgtacgccttcggcgacggcctgagctacaccaaattcgcgcacagcctcgtgtcggcgccggagcaggtggccgtgcagctggccgagggccacgcctgccacaccgagcactgcttctcggtggaggccgccggcgagcactgcgggagcctgtccttcgacgtccacctccgcgtgcggaacgccggcgggatggccggcgggcacaccgtgttcctcttctcgtcgccgccgtcggtgcacagcgcgccggcgaagcacctgctcgggttcgagaaggtgtcgctggagcccggccaggccggcgtggtggcgttcaaggtggacgtgtgcaaggacctgagcgtcgtcgacgagctcggcaaccggaaggtggcgctgggcagccacacgctgcacgtcggcgacctcaagcacacgctcaacctgagggtttaaattgattaggagttggaattaaacgggagatttgctagtgaggaagggcctctgatctgattgatacacggagtttggaattggattcgtcaagggaatttgcattacgagtggccgtcagaaatcagaattggttaatggggggtgtaataaggacggactcccccgttggagagaattggatcctcgggggtgggtcttttgctgtgggtgttaacatttgatttatttggagggtcgatttgcaactgtaatctttggaaaaagaaatttccgcaagtgtaattgattggaagggaaattagctcattttcgtccattcaattcaattcaaaatttcaaatcgttgctctc</dnaseqindica> 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| External Link(s) |
