Difference between revisions of "Os04g0645600"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0645600| Description = Protein of unknown function DUF6, transmembrane domain containing protein| Version = NM_001060601.1 GI:115460931 Gene...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0645600|
 
GeneName = Os04g0645600|

Revision as of 20:00, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0645600

Description

Protein of unknown function DUF6, transmembrane domain containing protein

Version

NM_001060601.1 GI:115460931 GeneID:4337195

Length

3681 bp

Definition

Oryza sativa Japonica Group Os04g0645600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33255130..33258810

Sequence Coding Region

33255399..33255461,33255695..33255830,33255909..33256026,33256384..33256485,33256554..33256624
,33256939..33257156,33257277..33257672,33258446..33258532

Expression

GEO Profiles:Os04g0645600

Genome Context

<gbrowseImage1> name=NC_008397:33255130..33258810 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:33255130..33258810 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttccaatctcaagtaccgtgctggcctcgtcctcatcgtcgccgtggtgctcatatgggtcacctccgcggaggtcacgcaggggatattcactaaatacaagcaaccctttgcaattacttacctgggggcctcccttatgatcatctatatacctctttcatttttaaaggattttatatgtaatttgttgagaaggtcttcttcaagtagtagagtttcaaaagttaccaacaaatcttctttcggtggttgtgctcctctgaagaatggtgaattccagaagatgttggaaatggaatctcaaaaaactatagtcataaactatactgatgtggatattcctgtaatagaagagacaaaacctcttatatgtggaatcactgaattcgatgacgttttgaaggagcaagaactttccactaaggagattgcaatgtatgggttgtatctttgtcccatatggtttgtgacggagtacttgtcaaatgcggcacttgcaagaactagtgttgctagtactactgtactatcttcaacgtcaggactcttcactcttttcattggtgtgctacttggccaagattctataaatgctgcaaaagttattgctgtttttattagcatggctggtgtggtaatgacaaccatggggcagacttgggcatcagatgaatcagaaatcagcaattctggtgccactcagagaactcttctaggtgacatgtttggtcttctgtcagctatgtcatatggtttattcactgtgcttctaaaaaagtttgctggagaggaaggagaaaaggttgatgtccaaaaactgtttggctacctcggacttttcagtcttgttcttctctggtggcttgtctggccattgaccgcattaggcattgaaccaaagtttacaataccccactcagccaaagtggatgaagtggtgttggcaaatggccttattggaagtgtattgtcagactacttctgggctctttctgttgtttggactactcctttggtggccaccttgggcatgtcactcacaattccactagcaatggtggctgatatgatcattcatggtcgtcgttattcagcggtctatatctttggttctgtccaggtattttctgggtttgtcattgcaaatcttgcggatcgcttttcacgttttctagggctctag</cdnaseq>

Protein Sequence

<aaseq>MGSNLKYRAGLVLIVAVVLIWVTSAEVTQGIFTKYKQPFAITYL GASLMIIYIPLSFLKDFICNLLRRSSSSSRVSKVTNKSSFGGCAPLKNGEFQKMLEME SQKTIVINYTDVDIPVIEETKPLICGITEFDDVLKEQELSTKEIAMYGLYLCPIWFVT EYLSNAALARTSVASTTVLSSTSGLFTLFIGVLLGQDSINAAKVIAVFISMAGVVMTT MGQTWASDESEISNSGATQRTLLGDMFGLLSAMSYGLFTVLLKKFAGEEGEKVDVQKL FGYLGLFSLVLLWWLVWPLTALGIEPKFTIPHSAKVDEVVLANGLIGSVLSDYFWALS VVWTTPLVATLGMSLTIPLAMVADMIIHGRRYSAVYIFGSVQVFSGFVIANLADRFSR FLGL</aaseq>

Gene Sequence

<dnaseqindica>3350..3412#2981..3116#2785..2902#2326..2427#2187..2257#1655..1872#1139..1534#279..365#gcatcccctctctcttttcgtgagcagggaagagcatcccctctctcttttcgtgagcagggaagagggggggggggggggggacgggcagggcgggcgatgaggcgaggaggggcgccgcggagctcacccaccgagagccgcgccgcaagcatgctgcctctcggtgaggaggggtgctagccccgccgctgcccgcgcggttaaattgctcgccgcgccccgcacccgcactcactccaccaccaggcggggcaagaggagagggttggattgatatgggttccaatctcaagtaccgtgctggcctcgtcctcatcgtcgccgtggtgctcatatgggtcacctccgcggaggtcacgcaggtgacaagatttcttcgggttttccttttatcttttgtgattatttgttttctgggttcttagatcttggccggggatgcatgcttggttgacagcagattaattttattatttaatcaggaatcttggaacattcctcttcgctgatttgtttaatctgttcatgcattctttccagtaattaaaaattgtccaggcaacgttagaatctgacttgagttatagattcttcaattcttttgtcttacgagctttgatgtcttttgcaaccagttacttttttccatatgtcaaattgtgtgctcatggaatttctctagagaattgatgtacatgctccattgattattctcctgtctttcctcgtgtggctggtgtcaaaccctaatttgcttgaggtggttgtgacaattcgcatcatcaatacctggttaattggaggtggttatgacatccttgctcacctgtaatgcgtgattaaatattatatgggaaagtattattctagtttttttgcaaatcaagatgtttttcccttttattatcgaaaaagatgttccccctacccgtgttcaatttttaaaattctattctgaagaaaacaagatattggtttggtacttgcatttaactctcaagaacatgtcagttatagtagcccaccgttaagacgtatgatttatgtcttaaaacataatatgtttttgtttcttatagttttgataaatttgatgttatgcgatgaatataattttatttcattatgtgtgcaggggatattcactaaatacaagcaaccctttgcaattacttacctgggggcctcccttatgatcatctatatacctctttcatttttaaaggattttatatgtaatttgttgagaaggtcttcttcaagtagtagagtttcaaaagttaccaacaaatcttctttcggtggttgtgctcctctgaagaatggtgaattccagaagatgttggaaatggaatctcaaaaaactatagtcataaactatactgatgtggatattcctgtaatagaagagacaaaacctcttatatgtggaatcactgaattcgatgacgttttgaaggagcaagaactttccactaaggagattgcaatgtatgggttgtatctttgtcccatatggtttgtgacggaggtaatttcctaatatttacctgttcattaaaattcatagggatcatttgatttcaaccatacaagcagtagtttgattgctaaatgttactcattcttctcttctgtttaatggatgcagtacttgtcaaatgcggcacttgcaagaactagtgttgctagtactactgtactatcttcaacgtcaggactcttcactcttttcattggtgtgctacttggccaagattctataaatgctgcaaaagttattgctgtttttattagcatggctggtgtggtaatgacaaccatggggcagacttgggcatcagatgaatcagaaatcagcaattctgggttagtgcgttttacccttaaataaacatcacagttctgcactgatgcctcaggacatataaaattgtttgtgattaatttgctatgctcataaagcccttgcatttgcttgcttgtagtagattggttgctgcaactgaattgcttttcatataaatataagtgcataaaaaaacataaaagcgctatttattccatttttaagatggccttgtaactgaagatcatgttgaagatgattttgtaactttgagacagcactcactttgttggccacaagttctgcagctaatctgtaaactttatgaatgcagtgccactcagagaactcttctaggtgacatgtttggtcttctgtcagctatgtcatatggtttattcactggttagttctttgcttcctttagttgatctgtcttgattcaactgctaattgtttcaacattattttagtgcttctaaaaaagtttgctggagaggaaggagaaaaggttgatgtccaaaaactgtttggctacctcggacttttcagtcttgttcttctctggtggcttggtaagattttccttgttaactataaaaattgattcaatgaaaagtctaaaagactaattagcattcaatttttaattagtatttggtacataaaatggaatcgcaaaggatgtcatgtatgggcatctcatgtgctgctagagaatctgtctctattgttcgtagtctgaaattctctttcttcagcaccacgcatgccaataattctttttgttcaggtattctagtctactgcgtagaacacaaacctttgtgaccatgttcttttgtagtttggttcaagcacatatatcattcatgtattccatgattggttctttgatccagatatgctaaatttctctcttttattttcagtctggccattgaccgcattaggcattgaaccaaagtttacaataccccactcagccaaagtggatgaagtggtgttggcaaatggccttattggaagtgtattgtcagactacttctggtacgcactgaccaaggataacatttttattatattgttgcctagttgtgctatttttgacatggagcttctggtcagggctctttctgttgtttggactactcctttggtggccaccttgggcatgtcactcacaattccactagcaatggtggctgatatgatcattcatggtcgtcgttattcagcggtctatatctttggttctgtccaggtaactgatgtcctcagcttaggattgtattttttttaagttatgtaaatgctgttattaaccattttacaattaggtgaaagtaaatcaaaattttctgttcttataataatatagccattctttataactatgaaaatctgactgattagttctttgatactttatttgttcttagatcaatcctgcttgaactagtcatttgctttaccctgcttacttgtgctttgcaggtattttctgggtttgtcattgcaaatcttgcggatcgcttttcacgttttctagggctctagtgtcacgaaatcaaccaggttttattagagtgtacatctgtgtggatcgttagacaaatacccttgtttcataagattgcgaaaatgttactgtagttttttttttctcttggccctttacacacaggaatggaaaatttttgtggcggtgaaatagaaaagagtgacttgaagaaactttatgctgtagcaacccttgcaactgtaaattcttttgctataaaatccttctcaatgtatactactgtagcttcctacagtagacttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0645600, RefSeq:Os04g0645600