Difference between revisions of "Os04g0671800"

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(Created page with "{{JaponicaGene| GeneName = Os04g0671800| Description = Zinc finger, CCCH-type domain containing protein| Version = NM_001060756.1 GI:115461241 GeneID:4337362| Length = 400...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0671800|
 
GeneName = Os04g0671800|

Revision as of 20:01, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0671800

Description

Zinc finger, CCCH-type domain containing protein

Version

NM_001060756.1 GI:115461241 GeneID:4337362

Length

4006 bp

Definition

Oryza sativa Japonica Group Os04g0671800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34671199..34675204

Sequence Coding Region

34671570..34673447,34673672..34673782,34674790..34674936

Expression

GEO Profiles:Os04g0671800

Genome Context

<gbrowseImage1> name=NC_008397:34671199..34675204 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34671199..34675204 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcggacggtgccgcggctgcggcggcggcgggggaggcgagcacggaggccggcgcgaggcccctggcgccagaggaggaggcgctgcggcgcaacaccgactgcgtctacttcctcgcctcgcccctcacatgcaagaaggggaacgaatgtgattttcgtcacagtgataatgctcgtatgaaccctagagactgctggtactggttaaatagcaattgcttgaatccaaaatgtccgtttcgccatccgccaattgatggtatgtttggtgctccaactactggaatgcctgcagtttcttcacactacgctccatttaactctggaaagcagttggttccatgctattactttaaaaagggaaactgcttgaaaggtgacagatgcgcattttatcatggaccacaatcagtgggaaataatccatcagaacaggtggtaaaagtttcttccttacctttggagcagcttcagactcaaaagaatgatttgttgggcattaaagattctgtgcagtctactaattccattcagcatggtgctccaataactaatgagaggggcaaaacagccgttgatcggtcaacggttaattctgccaggacagctacagttgcaataccggttgcttccaatgcaatgtcttgtcctaagtcagagaaggtaaaaagtagtacgccagcagcacttaaggaaagcttcactacttcttcaggtggggatcatcctgagtgctaccagaaccattttccaatggatagtgatcctgtgcgagattggaaccaaagttatgaaatgccccctgcagatgatctgccccagaacagtagggaggctgatgaacttttgggtgaatcttcaccaggttttgatgttctcgtggacaatgatgcagatggtgctgcttatttacatgatgaagattttggaggagatatgtatccagtggaagattatgaatatgctccagctgattttgatgttcgtgcacatcatgaaagagagcggttcaatggtatggatgagcaagaccagatgggacatatgtatgatggctacgagagaaaacggcgtagatcatctgagaggagcatggaacggcctttccactcagaaagaaggtttctgcaaagagatagagaccgtgtcgagatggatggatcggatttacgtcatcggctccgtaggagaagaataaatgagtcttcattggcaattagtccagaacgcaatggagagcaacggcggagggatgagcgctacagggaaagggcacatggtcaccgttcacacagggatcatcaccagagctctcgaggaagcactcttagctctcgtctgcaaggcagaataaagcttcctggaagatctcctgacagagttgatactcgctccgagaaagagcgagatagaagaagactccgggacaggctgtctccagttaggcgcacggaatttcagggtaccaggcatagggaggcaggacaacatgaagagcagacccagcggagatcaagtgaacttgctttaggttccaggaatgcagatggccagcatttgacaaaggatgtgcctgactcacacaacttccctcatcgcaaaaactcgagggactccagtaaggccaatggaagtgttgagcctgaagcatcgcttgattttgagggcccaaagccccttagtgtcatcttacagcggaaaagagaggcagcatgggccaatggcacatctgcctgtagccccaaacaagataaatctgccgaggtctcacacaggcaagcttctctggctgaagctgagaaggaaggtgacaacataattagttctgatgaatacaaaagtggatctggcgatgaagaattcagagacgaaggccacatccctgtggagggccatgggcaatcttcatctcatggtgacaaacttgaggctgaagatattattgaggtggatcccgtggaaaatcaagatgctgataattatgaccagagggagggggagtcctactatgagcctatcgaaggccaggactacaaatccgatgacgagaatgcttatgaagatgatgatgaagagtatgatgacgatgatgattttgctcggaaagtaggggttgttttctcttga</cdnaseq>

Protein Sequence

<aaseq>MEADGAAAAAAAGEASTEAGARPLAPEEEALRRNTDCVYFLASP LTCKKGNECDFRHSDNARMNPRDCWYWLNSNCLNPKCPFRHPPIDGMFGAPTTGMPAV SSHYAPFNSGKQLVPCYYFKKGNCLKGDRCAFYHGPQSVGNNPSEQVVKVSSLPLEQL QTQKNDLLGIKDSVQSTNSIQHGAPITNERGKTAVDRSTVNSARTATVAIPVASNAMS CPKSEKVKSSTPAALKESFTTSSGGDHPECYQNHFPMDSDPVRDWNQSYEMPPADDLP QNSREADELLGESSPGFDVLVDNDADGAAYLHDEDFGGDMYPVEDYEYAPADFDVRAH HERERFNGMDEQDQMGHMYDGYERKRRRSSERSMERPFHSERRFLQRDRDRVEMDGSD LRHRLRRRRINESSLAISPERNGEQRRRDERYRERAHGHRSHRDHHQSSRGSTLSSRL QGRIKLPGRSPDRVDTRSEKERDRRRLRDRLSPVRRTEFQGTRHREAGQHEEQTQRRS SELALGSRNADGQHLTKDVPDSHNFPHRKNSRDSSKANGSVEPEASLDFEGPKPLSVI LQRKREAAWANGTSACSPKQDKSAEVSHRQASLAEAEKEGDNIISSDEYKSGSGDEEF RDEGHIPVEGHGQSSSHGDKLEAEDIIEVDPVENQDADNYDQREGESYYEPIEGQDYK SDDENAYEDDDEEYDDDDDFARKVGVVFS</aaseq>

Gene Sequence

<dnaseqindica>1758..3635#1423..1533#269..415#acgcgcagccaagagaggcgaagggcgcaacgcaacgcgaacccctccttcccccgtcgcgcccaaccctaacccgcctcccctccacgtagatccaatcccgccgccaccgccgaaccctagcccgccccacctccctccccgccgccgccggaggcgcgcgcgcgcgcgatcggcgtcctcccgccgccgcgttcgtgcggggtggggttgggaggaggaggaggaggaggagggcccgacggcggctcctctcgagacgggggccatggaggcggacggtgccgcggctgcggcggcggcgggggaggcgagcacggaggccggcgcgaggcccctggcgccagaggaggaggcgctgcggcgcaacaccgactgcgtctacttcctcgcctcgcccctcacatgcaagaaggtgtgtgctcgttctctctcgacgattcgtcgtctcttttccctcgtatataagctggtttggtttttggggcggggtggtaattcgtcttttctcgattggagcttagaatttgaattccgcacctcgtttcgggaatcttgatttctgagctaagtaaacacgaatttctttggttcaagatggaatcttttcatatggctattccccctcatccaagatgtgatgcttaatgtagataacgtaataatataagttcgtagtgccttcaggttcggggtatttgttgcctcttggtgttagcccctgaatttttcagggtttctatgctaggtcaaattctgaatcggctctataatttaaaatttgaatggtatggttgtcctgaattgatgctccttcgggtgaaaagtgaaaacaatgtaatttactatcgcatttgttcccaatatatcgctattgcagtggctacatggcttttagtagtacggtaaggtaggaattgtaatgcttcccttgtcaccaggagcactataacaatatgttagtatccttattagtctagttattcaagatcattgcttcacaatttttttgtttctctttgggaatccttgctcggctcagaattccatttgcttttagcccctctattattttggaatacgtatgatgctgtactgatttagttctggagctgttctgatgaactatggttaaattagagagaggcaaaacgcttgccataaatcaaatctgtcacacaatctgatgtgttgtaactttgtaatcttgtttgataatactatcaaaattatgctacattaatgcaaatatgtgcaattctctatatataaacattaatgtaacactaaaaaaatgctacattaatccttatgggcttttgtgtcttatttaccatgaatattttgtccatcatggatttgttactaacttctagcttgaatattttaattgataatgattctttttgttccttacatcaggggaacgaatgtgattttcgtcacagtgataatgctcgtatgaaccctagagactgctggtactggttaaatagcaattgcttgaatccaaaatgtccgtttcgccatccggtatgtccctttccttcctttttccccttatgcactggtattatgtttttttatcaatacttgccagcaagcagcattgtctaagactagtaaatttgctgttatgtttctgttcatcagaaactaacagggtgtttgctcctagttattaagcttaatattatttggtcattttgtccagtgaagttatttggagtctaattctgtcttctacttttacccagccaattgatggtatgtttggtgctccaactactggaatgcctgcagtttcttcacactacgctccatttaactctggaaagcagttggttccatgctattactttaaaaagggaaactgcttgaaaggtgacagatgcgcattttatcatggaccacaatcagtgggaaataatccatcagaacaggtggtaaaagtttcttccttacctttggagcagcttcagactcaaaagaatgatttgttgggcattaaagattctgtgcagtctactaattccattcagcatggtgctccaataactaatgagaggggcaaaacagccgttgatcggtcaacggttaattctgccaggacagctacagttgcaataccggttgcttccaatgcaatgtcttgtcctaagtcagagaaggtaaaaagtagtacgccagcagcacttaaggaaagcttcactacttcttcaggtggggatcatcctgagtgctaccagaaccattttccaatggatagtgatcctgtgcgagattggaaccaaagttatgaaatgccccctgcagatgatctgccccagaacagtagggaggctgatgaacttttgggtgaatcttcaccaggttttgatgttctcgtggacaatgatgcagatggtgctgcttatttacatgatgaagattttggaggagatatgtatccagtggaagattatgaatatgctccagctgattttgatgttcgtgcacatcatgaaagagagcggttcaatggtatggatgagcaagaccagatgggacatatgtatgatggctacgagagaaaacggcgtagatcatctgagaggagcatggaacggcctttccactcagaaagaaggtttctgcaaagagatagagaccgtgtcgagatggatggatcggatttacgtcatcggctccgtaggagaagaataaatgagtcttcattggcaattagtccagaacgcaatggagagcaacggcggagggatgagcgctacagggaaagggcacatggtcaccgttcacacagggatcatcaccagagctctcgaggaagcactcttagctctcgtctgcaaggcagaataaagcttcctggaagatctcctgacagagttgatactcgctccgagaaagagcgagatagaagaagactccgggacaggctgtctccagttaggcgcacggaatttcagggtaccaggcatagggaggcaggacaacatgaagagcagacccagcggagatcaagtgaacttgctttaggttccaggaatgcagatggccagcatttgacaaaggatgtgcctgactcacacaacttccctcatcgcaaaaactcgagggactccagtaaggccaatggaagtgttgagcctgaagcatcgcttgattttgagggcccaaagccccttagtgtcatcttacagcggaaaagagaggcagcatgggccaatggcacatctgcctgtagccccaaacaagataaatctgccgaggtctcacacaggcaagcttctctggctgaagctgagaaggaaggtgacaacataattagttctgatgaatacaaaagtggatctggcgatgaagaattcagagacgaaggccacatccctgtggagggccatgggcaatcttcatctcatggtgacaaacttgaggctgaagatattattgaggtggatcccgtggaaaatcaagatgctgataattatgaccagagggagggggagtcctactatgagcctatcgaaggccaggactacaaatccgatgacgagaatgcttatgaagatgatgatgaagagtatgatgacgatgatgattttgctcggaaagtaggggttgttttctcttgagctctgtgggccttctcctggttttgttgcatgcagcaaagctgaaaatgcttgccttagtgaatctatttggataaattcctctggtgctttgtgttttgttcttgaagttcatagtgccaaagcctttatttataaggctgataactgataagtataggtcaggtatgaagcgggggtaggattcataaattaaaagggctttacgtgtaaaaactgctgcactcgttgtgttcagcatatatctgatctatcctgaaactattgtattgtattagtttcctaactaacagacaagatatttctttgataaattttttgcctgatatgggtaatataatcagccccattttggaggggttcttttcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0671800, RefSeq:Os04g0671800