Difference between revisions of "Os04g0691900"
(Created page with "{{JaponicaGene|
GeneName = Os04g0691900|
Description = Chaperonin Cpn60/TCP-1 family protein|
Version = NM_001060898.1 GI:115461525 GeneID:4337509|
Length = 5542 bp|
Defi...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0691900| | GeneName = Os04g0691900| | ||
Revision as of 20:02, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os04g0691900 |
|---|---|
| Description |
Chaperonin Cpn60/TCP-1 family protein |
| Version |
NM_001060898.1 GI:115461525 GeneID:4337509 |
| Length |
5542 bp |
| Definition |
Oryza sativa Japonica Group Os04g0691900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:35813156..35818697 |
| Sequence Coding Region |
35813377..35814372,35814457..35815293,35815398..35815732,35816102..35816228,35816325..35816483 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:35813156..35818697 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:35813156..35818697 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaatagtgtagtagagatcatggcgatcagttacccgccggaggatggccggtactactgttcttccgttgccgccggcgatgattcacctgcggcccatcatactaacgcccacgacgactgggactgggactgggtacccccaccccctgctgatgctgctgctgctgctgcggcggacgacgacgacgacgatggcgatccgactcctgctggtagtcctggcagcaggggcgaagacgaggaggaggagcggcagagggcgcagatggtgagcgccatgaacgggcagctgaacatgctggccagccggttcctggcatcggcgggcgtggaggaggagtggctggaggtggtgacggcgctgtcctgggaggcggcgctgctgatccagacccacgcctgcaccgccggcaacgacatggacccggcctcccacgtgaagatcaagtgcgtggcgtccggaaggcggcggcaaagccaggtggtgcgggggctggtgttccgcaagaacgcggcgcacaagcacatgcccaccaagtgccaccgccccaccctcctcctcctccacggcgccctcggcctcgactcccatctcggcttctcctccttcgactccatggagcaggacaagctcattctccgagcctccatctcccacatcatccacacctgcagccccaacgtcgtcatggtcgagaagaccgtctcccgcgacattcaggagctcctcctgcaccacggcgtcactctgctgctcgacatgaagctccaccgcttgcagagaatcgctcgctgttccggtgctcccttgctctccttctcccagcttctccatgattgccccaaccacctcaagcactgcgactacttccacatcgacaagttcttcgaggaccataacaccaccaccactactagtgctgctgccctgaacaagccatctaaaacattgatgttcttggaaggcttttccaacccattgggatgcaccatactgctcagaggcgcaagcacccaagaactgaagaaaatcaagcaagtcttgcactacacaatattcgctgcataccatctggttgttgagacatccttctttgaagatcagagggtattcttgaatgatacaaatgttgacgggacaccacaaatcactcatcagacttccattgtctcaaatcgttcacttcctactgattatgatgtcacttgtactagcaggggatcattactggaataccatgatggggatcacaaggctacagttcctttcacaaataaaccagactcgtacacacaagatgagggtacagccatccactgtgaagcacctccatctgaaaacctgctgtcctcagtctccggatcactcagaagattcattgatatattccgttatcagaatatttatttacctgtaacttcttctcaagatacaactggtcatcagaatgaacaagatactgaaaccagccaagaaacggcgtctgataccttaacaaaggatcattcttgtgagtatatggatcagttaaatgatctccaggaacaagtattcgccaaaaccaaccaaaaaatgtcacagcctgatcctttcggtactgaaaaacatcagcagaatgtggaacagtacagggccggcgaaaatataaattcagacacagatgaggctgatgatgtaatggattctcagagcatactcatcttgttatccagccaatgtgttacgaagcaggttgtctgtgaggagagccatctataccgcataaactattatgggaatttcgatgtctccttaggacgatatttgcaagacattttgcagaatcagaacctaagctgttcctcatgtggagagcctccagatgctcacatgtactcttacacccaccgcaatggaaatctaactattaatgtgaggcgtttgctgcctcagcatcatttgcctggtgaatctgaaggaaaaatttggatgtggactagatgtctaagatgtgagcatgagagagggatatccaaatcatctcggagagtgctaatatcaactgaagcgcgtaatctctcctttggcaagttccttgaactcagtttctcaagccactctgctgctagaaggctatcagtttgtgggcatttggtcaacagggactgcttgcgatattttgggttgggttccaaagttgcaaagttccaatattcatcagttgaaatttacactgcctgcaaaccgcaacgaacccttgagtttcacaatcccgatatgcgtgagtggttcgagcaagagggaagaaatgttcttgcgagaggagttaagcttttctatgaagtttctagcttaatacagcacatgaagattttctctgaggtggcaattaactgtggagactctcttcctgtcaaagaagtttcccaacttgaagagatgctaattgaagaaaaagctcagtttgtggattctctggtgaaggctgttgatgaaagcgggatgtctagctcctctgtgaatgagattcttggtgtaaattgtctctaccaggatcttctgattcgactgtacgtgtgggaccgtcgtttccatcaaattgttgagtgtaagtctggaagaatggctaattgtgtcggcaagaaggaagctgctgaatttgccggtgaaccagctgcaactggtgaaagtgcagtgccctttgagaatggatatatcaaggaaatgcagtacagcagcgaaaccttaactgatgaaaattcacggcgtgaggagcaacatatcacaaaagtgccttctttcagagtcttggaaggtacagatacgcagttgataaatcctgaatgtggggataacagggaaacatggatttggagtccattgcacgagttaagagagagttacaggcatgaactgcaggccgggtatttggaaagattcgaacttgtcaacaactattctccatctcatctatcccccctgcacaaacaatcatctgctgagttcatagttggtccaggtggcaatgtgttgtgcatatcagaggatgaaatatccagcataatatcccgcgcactggccatatcggaggaacgtcgccatcttttactagatgctctcatggttgaaggtgaggcagcctacagcagggggagtgagagctctaagatggagaaatcttacagctcattatctgaagcttcttcggcctcttcgtcgtggtcatctattggatcttcagactcagatgcaagcttttcatctgacgacctcttctccagctatgatagctcacttctgtcatccttacttcatcctgaagtatctgtcaatgggaaatcatctctcaaagggaaatactcggttatttgtgtacatgccaatcagttttacacccttcggaagaaatgctgcccatctgagcttgcatatatcacttccttgagccggtgcatgaagtgggatgctcaaggtggaaaaagtaaggctttctttgcaaaaacattggatgacaggttcatcatcaagcaaataaagaagacagagtttgaatccttcatagaattcgcacccgattactttaagcatgtgtatcattctctcgacactgggagccaaacttgtcttgccaaaattttaggaatctatcaggttaagcaaatcagacatggcaaggaagtgaagcttgatctgatggtgatggaaaatcttctcttcggacacaaattgtcaaggatatatgatctcaaaggtgttgttttctccagacatgtctctgattcgaatgaccatggaactgtttacttggatcaaaactttgtcgatgatatgcgtgtttcccctatatatgttggtggaagaacgaaacatctcttgcagcgggcaatctggaacgacacagcttttctcacttcaattaatgttatggactactcgttactggtgggagtggacaaagaaaagcatgagtttgtatttggcatcatagattacctaaggcagtatacatgggacaagcaactggagacgtgggtgaaaacttctttggtagtgccaaagaatgcttcaccaacagtaatctcacccaaagagtacaagaagaggtttaggaagttcatggccaagtatttcctgacagttccagacgattggagtacatag</cdnaseq> |
| Protein Sequence |
<aaseq>MNSVVEIMAISYPPEDGRYYCSSVAAGDDSPAAHHTNAHDDWDW DWVPPPPADAAAAAAADDDDDDGDPTPAGSPGSRGEDEEEERQRAQMVSAMNGQLNML ASRFLASAGVEEEWLEVVTALSWEAALLIQTHACTAGNDMDPASHVKIKCVASGRRRQ SQVVRGLVFRKNAAHKHMPTKCHRPTLLLLHGALGLDSHLGFSSFDSMEQDKLILRAS ISHIIHTCSPNVVMVEKTVSRDIQELLLHHGVTLLLDMKLHRLQRIARCSGAPLLSFS QLLHDCPNHLKHCDYFHIDKFFEDHNTTTTTSAAALNKPSKTLMFLEGFSNPLGCTIL LRGASTQELKKIKQVLHYTIFAAYHLVVETSFFEDQRVFLNDTNVDGTPQITHQTSIV SNRSLPTDYDVTCTSRGSLLEYHDGDHKATVPFTNKPDSYTQDEGTAIHCEAPPSENL LSSVSGSLRRFIDIFRYQNIYLPVTSSQDTTGHQNEQDTETSQETASDTLTKDHSCEY MDQLNDLQEQVFAKTNQKMSQPDPFGTEKHQQNVEQYRAGENINSDTDEADDVMDSQS ILILLSSQCVTKQVVCEESHLYRINYYGNFDVSLGRYLQDILQNQNLSCSSCGEPPDA HMYSYTHRNGNLTINVRRLLPQHHLPGESEGKIWMWTRCLRCEHERGISKSSRRVLIS TEARNLSFGKFLELSFSSHSAARRLSVCGHLVNRDCLRYFGLGSKVAKFQYSSVEIYT ACKPQRTLEFHNPDMREWFEQEGRNVLARGVKLFYEVSSLIQHMKIFSEVAINCGDSL PVKEVSQLEEMLIEEKAQFVDSLVKAVDESGMSSSSVNEILGVNCLYQDLLIRLYVWD RRFHQIVECKSGRMANCVGKKEAAEFAGEPAATGESAVPFENGYIKEMQYSSETLTDE NSRREEQHITKVPSFRVLEGTDTQLINPECGDNRETWIWSPLHELRESYRHELQAGYL ERFELVNNYSPSHLSPLHKQSSAEFIVGPGGNVLCISEDEISSIISRALAISEERRHL LLDALMVEGEAAYSRGSESSKMEKSYSSLSEASSASSSWSSIGSSDSDASFSSDDLFS SYDSSLLSSLLHPEVSVNGKSSLKGKYSVICVHANQFYTLRKKCCPSELAYITSLSRC MKWDAQGGKSKAFFAKTLDDRFIIKQIKKTEFESFIEFAPDYFKHVYHSLDTGSQTCL AKILGIYQVKQIRHGKEVKLDLMVMENLLFGHKLSRIYDLKGVVFSRHVSDSNDHGTV YLDQNFVDDMRVSPIYVGGRTKHLLQRAIWNDTAFLTSINVMDYSLLVGVDKEKHEFV FGIIDYLRQYTWDKQLETWVKTSLVVPKNASPTVISPKEYKKRFRKFMAKYFLTVPDD WST</aaseq> |
| Gene Sequence |
<dnaseqindica>222..1217#1302..2138#2243..2577#2947..3073#3170..3328#3448..4629#4740..5000#5089..5337#atgcatattttgttccagattatcgatggtggacaggacaggagccaactgcaacaagatatactcattctcgatcgatttctaagagatacctagacacttgctcctcctgctataaggtaattaacgcttcgctagctaattaattgcattagtttcaattctttttatgatcttctttcgatcgagcaaataactcaagtaagtgcatgcatatatagatgaatagtgtagtagagatcatggcgatcagttacccgccggaggatggccggtactactgttcttccgttgccgccggcgatgattcacctgcggcccatcatactaacgcccacgacgactgggactgggactgggtacccccaccccctgctgatgctgctgctgctgctgcggcggacgacgacgacgacgatggcgatccgactcctgctggtagtcctggcagcaggggcgaagacgaggaggaggagcggcagagggcgcagatggtgagcgccatgaacgggcagctgaacatgctggccagccggttcctggcatcggcgggcgtggaggaggagtggctggaggtggtgacggcgctgtcctgggaggcggcgctgctgatccagacccacgcctgcaccgccggcaacgacatggacccggcctcccacgtgaagatcaagtgcgtggcgtccggaaggcggcggcaaagccaggtggtgcgggggctggtgttccgcaagaacgcggcgcacaagcacatgcccaccaagtgccaccgccccaccctcctcctcctccacggcgccctcggcctcgactcccatctcggcttctcctccttcgactccatggagcaggacaagctcattctccgagcctccatctcccacatcatccacacctgcagccccaacgtcgtcatggtcgagaagaccgtctcccgcgacattcaggagctcctcctgcaccacggcgtcactctgctgctcgacatgaagctccaccgcttgcagagaatcgctcgctgttccggtgctcccttgctctccttctcccagcttctccatgattgccccaaccacctcaagcactgcgactacttccacatcgacaagttcttcgaggaccataacaccaccaccactactagtgctgctgccctgaacaagccatctaaaacattgatgttcttggaaggcttttccaacccattgggatgcaccgtaagcactcgatcaaatactccatttcattcaattacctagatcaattactctgcattattctcaatacgcgcgcgcatgcagatactgctcagaggcgcaagcacccaagaactgaagaaaatcaagcaagtcttgcactacacaatattcgctgcataccatctggttgttgagacatccttctttgaagatcagagggtattcttgaatgatacaaatgttgacgggacaccacaaatcactcatcagacttccattgtctcaaatcgttcacttcctactgattatgatgtcacttgtactagcaggggatcattactggaataccatgatggggatcacaaggctacagttcctttcacaaataaaccagactcgtacacacaagatgagggtacagccatccactgtgaagcacctccatctgaaaacctgctgtcctcagtctccggatcactcagaagattcattgatatattccgttatcagaatatttatttacctgtaacttcttctcaagatacaactggtcatcagaatgaacaagatactgaaaccagccaagaaacggcgtctgataccttaacaaaggatcattcttgtgagtatatggatcagttaaatgatctccaggaacaagtattcgccaaaaccaaccaaaaaatgtcacagcctgatcctttcggtactgaaaaacatcagcagaatgtggaacagtacagggccggcgaaaatataaattcagacacagatgaggctgatgatgtaatggattctcagagcatactcatcttgttatccagccaatgtgttacgaagcaggttgtctgtgaggagagccatctataccgcataaactattatgggaatttcgatgtctccttaggacgatatttgcaagacattttgcagaatcaggtacctatctatttttttaggaataatttcgataacacatgacatagtaggtcaattgtatatctactagtcaggatgtgatgttttttactgaactgtggcagaacctaagctgttcctcatgtggagagcctccagatgctcacatgtactcttacacccaccgcaatggaaatctaactattaatgtgaggcgtttgctgcctcagcatcatttgcctggtgaatctgaaggaaaaatttggatgtggactagatgtctaagatgtgagcatgagagagggatatccaaatcatctcggagagtgctaatatcaactgaagcgcgtaatctctcctttggcaagttccttgaactcagtttctcaagccactctgctgctagaaggctatcagtttgtgggcatttggtcaacagggactgcttgcgatattttgggtatgtattctcatttctcaagaactattttgaacatgtcgtgtaaaagttctctctatataatactccctccgtattttaatgtataacaccgttgacttttcgaccaacgtttgaccattcgttttatttaaaattttcgtgcaaatatgaaagtatttatatcatgcttaaagaacatttgatgatgaatcgagtcataataaaataaatgataattgtataaattttttgaataaaatgaatggtcaaacgttggataaaaaatcaacggcatcatacattaaaatatggaggtagtacatactaaacatcctttagcccttctttatttctttcttcttttgttggaaaaaatggtgacttcaggttgggttccaaagttgcaaagttccaatattcatcagttgaaatttacactgcctgcaaaccgcaacgaacccttgagtttcacaatcccgatatgcgtgagtggttcgagcaagagggaagaaatgtatgtactattttatttatcggtttcatcacatgatttatcttgtgaacattcataggtcagattgggcctaatgcttgtgttgcactttttaaggttcttgcgagaggagttaagcttttctatgaagtttctagcttaatacagcacatgaagattttctctgaggtggcaattaactgtggagactctcttcctgtcaaagaagtttcccaacttgaagagatgctaattgaagaaaaagctcagtttgtggtaaaccttctggtcttttttcttctctttaccttgtggtaactggtaagcctagagataagtgtgcattctaatcatctccgataactgtcaattccaatatgaatatcatcaaacaggattctctggtgaaggctgttgatgaaagcgggatgtctagctcctctgtgaatgagattcttggtgtaaattgtctctaccaggatcttctgattcgactgtacgtgtgggaccgtcgtttccatcaaattgttgagtgtaagtctggaagaatggctaattgtgtcggcaagaaggaagctgctgaatttgccggtgaaccagctgcaactggtgaaagtgcagtgccctttgagaatggatatatcaaggaaatgcagtacagcagcgaaaccttaactgatgaaaattcacggcgtgaggagcaacatatcacaaaagtgccttctttcagagtcttggaaggtacagatacgcagttgataaatcctgaatgtggggataacagggaaacatggatttggagtccattgcacgagttaagagagagttacaggcatgaactgcaggccgggtatttggaaagattcgaacttgtcaacaactattctccatctcatctatcccccctgcacaaacaatcatctgctgagttcatagttggtccaggtggcaatgtgttgtgcatatcagaggatgaaatatccagcataatatcccgcgcactggccatatcggaggaacgtcgccatcttttactagatgctctcatggttgaaggtgaggcagcctacagcagggggagtgagagctctaagatggagaaatcttacagctcattatctgaagcttcttcggcctcttcgtcgtggtcatctattggatcttcagactcagatgcaagcttttcatctgacgacctcttctccagctatgatagctcacttctgtcatccttacttcatcctgaagtatctgtcaatgggaaatcatctctcaaagggaaatactcggttatttgtgtacatgccaatcagttttacacccttcggaagaaatgctgcccatctgagcttgcatatatcacttccttgagccggtgcatgaagtgggatgctcaaggtggaaaaagtaaggctttctttgcaaaaacattggatgacaggttcatcatcaagcaaataaagaagacagagtttgaatccttcatagaattcgcacccgattactttaagcatgtgtatcattctctcgacactgggagccaaacttgtcttgccaaaattttaggaatctatcaggtaggtgtacttaatttacatcagacgtgctatggaataatttcatgattttttttccctccttggttgttatacatccttttaaggaccgggctcactatttgtttcaggttaagcaaatcagacatggcaaggaagtgaagcttgatctgatggtgatggaaaatcttctcttcggacacaaattgtcaaggatatatgatctcaaaggtgttgttttctccagacatgtctctgattcgaatgaccatggaactgtttacttggatcaaaactttgtcgatgatatgcgtgtttcccctatatatgttggtggaagaacgaaacatctcttgcagcgggcaatctggaacgacacagcttttctcactgtaagtactgatatttcatttcaaccacgtataaccaatcatgttctctcttacaatatgagctgacagaaatactaaatttttgcagtcaattaatgttatggactactcgttactggtgggagtggacaaagaaaagcatgagtttgtatttggcatcatagattacctaaggcagtatacatgggacaagcaactggagacgtgggtgaaaacttctttggtagtgccaaagaatgcttcaccaacagtaatctcacccaaagagtacaagaagaggtttaggaagttcatggccaagtatttcctgacagttccagacgattggagtacatagatagaaacgtctggggtcctgcaaatcctgtccattatctgttttgtttgtacacagtagaatggaacgctcacttgtttaaagttctccaatagtttgcagttttaaggcaaaattttggagcgaggcccaaatacatgatcaaaatcattgatccctcacatgtattggttactggtttgtggtagaaaaaaaagtttgtatc</dnaseqindica> |
| External Link(s) |
