Difference between revisions of "Os05g0102900"

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(Created page with "{{JaponicaGene| GeneName = Os05g0102900| Description = Snf7 family protein| Version = NM_001060924.1 GI:115461578 GeneID:4337536| Length = 3121 bp| Definition = Oryza sat...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0102900|
 
GeneName = Os05g0102900|

Revision as of 20:02, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0102900

Description

Snf7 family protein

Version

NM_001060924.1 GI:115461578 GeneID:4337536

Length

3121 bp

Definition

Oryza sativa Japonica Group Os05g0102900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:152480..155600

Sequence Coding Region

152660..152728,152828..152979,153665..153758,153853..153924,154062..154173
,154566..154714,155318..155368

Expression

GEO Profiles:Os05g0102900

Genome Context

<gbrowseImage1> name=NC_008398:152480..155600 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:152480..155600 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagaagatcttcggcgccaagaagaaccaggagcccccgcccagcatccaggatgccaccgatcggatcagcaagaggggcgactccgtggacgacaagatcaagaagctggacgctgagctcgcccgctacaaggaccagatcaagaagaccaggccaggccccgcccaggaggccatcaaggcacgcgccatgagggtcctcaagcagcgcagaatgtacgaagggcagcgtgacatgctgtacaaccaaacatataaccttgaccaagttgcttttgcatcagagggacttaaagatgctcagcaaacgatgactgcaatgaaggcagccaataaagagctgaaaggaatgatgaaaactgtcaagcttgaagatatagatagcttgcaagacgagatgatggatcttatggatgtgagcaatgaaatacaggaaactctcggaagaagctacaatgtccctgatgacattgacgaggaagaacttatgggggagcttgatgctttggaagccgacatggactttgaatcaaattcagtcccctcgtaccttcaaccagataaggaatcagatctagattctgagcttaacttgcctgctgcaccaacgggtcacacacccgccccaccaaaccggcagcaggaggacgaattgggattgccgacagtgccacaagcatcgatccgtagttga</cdnaseq>

Protein Sequence

<aaseq>MKKIFGAKKNQEPPPSIQDATDRISKRGDSVDDKIKKLDAELAR YKDQIKKTRPGPAQEAIKARAMRVLKQRRMYEGQRDMLYNQTYNLDQVAFASEGLKDA QQTMTAMKAANKELKGMMKTVKLEDIDSLQDEMMDLMDVSNEIQETLGRSYNVPDDID EEELMGELDALEADMDFESNSVPSYLQPDKESDLDSELNLPAAPTGHTPAPPNRQQED ELGLPTVPQASIRS</aaseq>

Gene Sequence

<dnaseqindica>181..249#349..500#1186..1279#1374..1445#1583..1694#2087..2235#2839..2889#gatctggaaggaagggagagagaaaccgaaacgagtcaaacagaagaaacaaacagacacgtaaggaggagaaatttcccctcccttccctgctcttttcgtactacttgcaaggaggagaaagaagaacacgaggaggaaatccaagccaatcgccgcctccgcctccgattccttccgatgaagaagatcttcggcgccaagaagaaccaggagcccccgcccagcatccaggatgccaccgatcgggtttctttctgtctttcttgtttcgattccatcttcaattctattctattcaattcatccaccaagcaatcgaatgaatcgaatcaaacaaacccgcagatcagcaagaggggcgactccgtggacgacaagatcaagaagctggacgctgagctcgcccgctacaaggaccagatcaagaagaccaggccaggccccgcccaggaggccatcaaggcacgcgccatgagggtcctcaagcagcgcagaatgtatatctccccttttttttttatttcatcatcattacttatcatacttatatactcttagattagattagaagattggttactctacttttgcctaataataataatctctactgcaaccccaaccatccaaccctcacccaaatatcatacatagacaccaaagctgagctcttgcaacctgcccttgtgttgcctatcaaattgttgcactgccttcttccttgtggacaacaacaacacatgaatgaaaaattaaagaactcgccattgatgacattataaaccgttgcatcttgtaccaagtcccggttacgccaatttttacaattcatcgtcttacaagtcatttgagataaaaagaggcataattttgactctgtaaattgtttgtgtcctttcataagcacagagtcttttcctttctaagtgtacttcatcttctttttttggttaagtaccgatgtggttcttcatatatattttgaaagattttcctaagggtagcagttatgttataagaaaaaaagagacttctattttattacttagttaaggaacccaatcatcatttaccattcactctgtatatcttgttgagctcttttgcttctccttcgaattacttactctattacggtactgtgctcatctgtatactgtcttatatatgctttcctgacaggtacgaagggcagcgtgacatgctgtacaaccaaacatataaccttgaccaagttgcttttgcatcagagggacttaaagatgctcagcaaacggtatatagctatagtatactcaagaagttttatttccatgatgttttacatcctgattcccaaacttatgatacaagtgttttcatttgggcagatgactgcaatgaaggcagccaataaagagctgaaaggaatgatgaaaactgtcaagcttgaagatatagatgtacgcagcatctttttgtgtaacatattcgtcatgttttcaagattttctggcttgcaatggattttcgttgtttccctgttttcttctgtttccaattgcatctgaatctagacccatgcttttcttatctgcagagcttgcaagacgagatgatggatcttatggatgtgagcaatgaaatacaggaaactctcggaagaagctacaatgtccctgatgacattgacgaggaagaacttatggggggtatggatcttatttttcagttttcttagattatactggcaccacaaaaatgtttgccttgaagttatgcagtcaacttgttttttctccccacaattctgtccatagtgtagtcagggtttgccatagctgcttactgccgtctaattgaaaataatttccagtttctgatggtgatctggtggattttcttttcaacctaaatttgtatgcgtgttgaggcagaaaacagtctagatgctcatgaattgttatttttttctgaatccatctctttggtactttgctattggtccttcaccagttctgtgttttgcatgtgttgacttaccgaaagcaaagaaacaatgcttgtctgcttgatgtcctgattctttatgtggaaaatgcagagcttgatgctttggaagccgacatggactttgaatcaaattcagtcccctcgtaccttcaaccagataaggaatcagatctagattctgagcttaacttgcctgctgcaccaacgggtcacacacccgccccaccaaaccggcagcaggtacatggactgtgacaatgtttactttcaataagactgcttagaagttcactctaaataattttctttatcttgatgtgaactatttgataggatgcagatttgaagatctttgtacttgtatttattagatttgaattcatttactcactgcagaatttggtacttcatccgtttcataatgtaagactttctagcattatccacattcatatagatgcagcatgaatctatatatataataatgtttagattcattagcatctatatgaatgtaggcaatgttagaaagtcttacattgtgaaacggagggagtagctgataggatagtacaccgtgtaaccgaagtctgtaggggtatagattatattctacagttggtcgacctgccctttatagaccagatattcacaacgtgacggtgatggggggcacataaaaggataatatgaaaaccttttcatgccaaataggtcctttggcttcatttataatgaattcactcagagctttggaaacaaataccccatttaggcatagttaatggattctcttgtgaacaataataataatttgaaagttgcttttatttgttggtgcaggaggacgaattgggattgccgacagtgccacaagcatcgatccgtagttgattggattcgttttgtaaaaacataatgtcgtatgcaataacaaattcagtgtatctttgctcatatactactgcaatttgttaagattggaaatagctttctcattgttttgtttagggtctatatgtaagagcatttgttactttttgaagtacagtgtaaatttaattggctgctggggcatacatatataagtccttattctgtgttggtgatgagctgcccttgcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0102900, RefSeq:Os05g0102900