Difference between revisions of "Os05g0121200"

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(Created page with "{{JaponicaGene| GeneName = Os05g0121200| Description = Similar to Transmembrane transport protein-like protein| Version = NM_001061031.1 GI:115461792 GeneID:4337651| Lengt...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0121200|
 
GeneName = Os05g0121200|

Revision as of 20:03, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0121200

Description

Similar to Transmembrane transport protein-like protein

Version

NM_001061031.1 GI:115461792 GeneID:4337651

Length

5398 bp

Definition

Oryza sativa Japonica Group Os05g0121200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1105055..1110452

Sequence Coding Region

1106164..1106270,1106394..1106451,1106719..1106777,1107452..1107530,1107620..1107676
,1107974..1108023,1108248..1108329,1108874..1108930,1109018..1109098
,1109184..1109271,1109614..1109690,1109768..1109886,1110162..1110393

Expression

GEO Profiles:Os05g0121200

Genome Context

<gbrowseImage1> name=NC_008398:1105055..1110452 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:1105055..1110452 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctccgcctccaccgccgtggccagcgccaccgccgggaccacccgttccttcgagaagctatctgccccatggatgataggccggggacacgtggcgctccccccgtcgccggggcgttatcccgcggtcacggtggccgcggcgtcgcgtcgcaccggcgaaggtgggaggaggcggaggagagccaggggtgctgatcaggaggatggcctctccctcagctccgaaattgaggcaccaagttccactccccccgttcgcactaccgacaaggagagcacgaaacctgcatcagaaaccggaatcacaaagaaaggatcagccattagaagagttactttggtggtccttgctgcggttttcttcggcgttagcatcgccctgagggatggggttgggaaggcatctgaatattttgctggatatttattggaacagagtttgtcagtagacaatctctttgtttttgttctggtcttcaagtattttaaagtgccacaggaataccagaaccgggtgctctcttatggtattgctggagcagtgatcttccgcacggtgatgatcaccctaggagcagctacgattcagaggtttgaagcagtgaacctattattggctttgatcctgctattcacttcatataagttatttgctgaagaagatgaagaatctgatctatctgacaatttcatagtgaaaacatgccaaagattcattcctgtcactgattactacgatggtgatcggtttttcacaactcaagaaggtttatggaaagccacacctttgctgttgactgtggcagtgatcgaactaagtgatattgctttcgctattgactcaataccagcagtttttggtgtcacaagggatccacttatagtgttatcatcaaatatttttgctatttctggtttgaggtcactctacgtactcatttctgaaagcatgtctgaattggactatttgcagcctgcaattggtatagttttgggcttcatagggacaaagatggtctttgacttttttggttatcatataccaactgaagcttcgcttgctattgttaccacgtgtctaagtggtggagtaatattgagtcttaggaaagcatcaactgaagaaaaggacaagtag</cdnaseq>

Protein Sequence

<aaseq>MASASTAVASATAGTTRSFEKLSAPWMIGRGHVALPPSPGRYPA VTVAAASRRTGEGGRRRRRARGADQEDGLSLSSEIEAPSSTPPVRTTDKESTKPASET GITKKGSAIRRVTLVVLAAVFFGVSIALRDGVGKASEYFAGYLLEQSLSVDNLFVFVL VFKYFKVPQEYQNRVLSYGIAGAVIFRTVMITLGAATIQRFEAVNLLLALILLFTSYK LFAEEDEESDLSDNFIVKTCQRFIPVTDYYDGDRFFTTQEGLWKATPLLLTVAVIELS DIAFAIDSIPAVFGVTRDPLIVLSSNIFAISGLRSLYVLISESMSELDYLQPAIGIVL GFIGTKMVFDFFGYHIPTEASLAIVTTCLSGGVILSLRKASTEEKDK</aaseq>

Gene Sequence

<dnaseqindica>4183..4289#4002..4059#3676..3734#2923..3001#2777..2833#2430..2479#2124..2205#1523..1579#1355..1435#1182..1269#763..839#567..685#60..291#gtggctgagcaccgtacgacgcctcccccgcccgcctctccccgacctcgtcgccggcgatggcctccgcctccaccgccgtggccagcgccaccgccgggaccacccgttccttcgagaagctatctgccccatggatgataggccggggacacgtggcgctccccccgtcgccggggcgttatcccgcggtcacggtggccgcggcgtcgcgtcgcaccggcgaaggtgggaggaggcggaggagagccaggggtgctgatcaggaggatggcctctccctcagctccggtgagttgcgtcgtcctcaccgtctcccactctccagcctctcctacctgactagctagctccatgtatccgtgctaattaagtatagtaccaattaaccttctagttgaaaccttgagcttggaattgttcgacgactcatagagagtcaaaggtgtgattagatgatttctaatcataaaacgcgcaacgattttgtttatacctcaccgagcatatatttatctgtggtgaaattaagttttctggttccccttatgtataactgtgagcagaaattgaggcaccaagttccactccccccgttcgcactaccgacaaggagagcacgaaacctgcatcagaaaccggaatcacaaagaaaggatcagccattagaagagttactttggtggttagtgtttgacgatataacgcttcatcagttgattttcagtgctgcgcttgattcagtaaattgaccttttgcaggtccttgctgcggttttcttcggcgttagcatcgccctgagggatggggttgggaaggcatctgaatattttgctgggtatgtgttatgcgtcacaactgaatttttatactgaaaaatgttttatggaactgtcagcatttacccatccaccagaacaattgtaggattcccgccggcactattatgttagcaaagccatctaggaaaagagttggtgaaaattaaaaatgtatgggctcattcattggtttgtgcaagttagtttgcccagttgcgattttgaacgtctcttacttgcttatttacaaatagttaaatgattatttctgaatttaactatgcttcttctttttgtcctcatctcctgtcttttaaattttatgtgtaacaatttgatatgtttctgttgtataacagatatttattggaacagagtttgtcagtagacaatctctttgtttttgttctggtcttcaagtattttaaagtgccacaggaataccaggtatgatttagtagttagtttggtatataatgcccatgtctatttcatccttttcttctcacatttttgtggtattcaaaacaagaaccgggtgctctcttatggtattgctggagcagtgatcttccgcacggtgatgatcaccctaggagcagctacgattcaggttgtttttttctcacatgttaacatcacttatcttcttagttctatgatcttgcagtaattcttcttaacttctcttttcctgtagaggtttgaagcagtgaacctattattggctttgatcctgctattcacttcatataaggtggatcgatcaatgcttcttttcttctattctccttttggtgtactaagttactttaccatgtttgaaatggacatatatgatgctattattgctcacccaatacttccttttatgagaatgacaagttctcactgtcattttacaaaaatctacctgttttatttcctgtgaaatttcagtcccatcactgtctctaacaacaatatactctaatactcaaccaatcctggactccaggtgcatgtattacattattaaaaaagtatttggcatataccttccatcagtcaatggctaacagcatgatgacttgcatcttttggggattcttgtttgttccagctatcttgttatagttcaacctagtccttccatcatttagtgagcactaagttgtcacacttcaaaaatattatgttttgcttaattgtaatgaatggcacctcaacatgttaggcaaagcttctttcgagtaacttcaagtgcattaaatataagtgatgtttacggatgctaatattcattcttaacatgatggcagttatttgctgaagaagatgaagaatctgatctatctgacaatttcatagtgaaaacatgccaaagattcattcctgtcactggtaattaacttcattcgatgattttcagtttctcttatgacattacatttatattatttggaacgaaaccaatctccactgtgagctccagatcatagccatactgaccagatactcactgaaattttttccacttccttcacaagtgaacttcttatgagtagaagttaatatacactcgcttgcagttgcggttaaactcactcttatgtttcttttgtcagattactacgatggtgatcggtttttcacaactcaagaaggtttatggaaagtaagtgtccgactgttgtccagtataagctggatcattatcacaagttcacagcagcttgtacacgcttgttagtactagacatgattgccttcttagtattagaaaactgacctgtctacatattaaagaatctgaagtatatctatttgtcagtacccttacaacttctgcttgtgcagaaaagattctaactacaatatagatgaaattgggttgaccattcaatacaataatctgacatcaagagctaccttttcctgaagatacattttcttttgttgttaatatctgcaggccacacctttgctgttgactgtggcagtgatcgaactaagtgatattgctttcgctgtaggttcctttgcaatctttttcctgtgcaaagtttcattttctattttatgatcacatgaatggggattgacatttctgatttatagattgactcaataccagcagtttttggtgtcacaagggatccacttatagtgttatcatcaaatatttttgctatttctggtaatccttctttcttttgtgtttatgaacacatcttacaacaatcctttctttttattcatagcacatatcagcacttaccaatgtaagaaattttacaagagaacttttaccactagctaggaacttcccgtgagcttgctatttatcaatgaatatttctgcagcctttacttttgttagcacctgcagcctgcattcattcagccagttgatgctcagagttagttttcacaattttgcagttatctgttccataaaagtactgtttcttgctgtaggtatttgggctgcattcagcttgattgtttcatataaaatttaaatatactagttatatatctggatattacagacgatggtctaatgtggcacacatgaccctattatgtcctctcgataacgccaactctaggtttctagcaatctttgatgtttatacctcagtttgcagacaagtgattgatttggtaattgagtaacttctaatgatgtaattgggtaaatgataaattgataataacatacatcatagttacatactgaaagttgaatgaagcatgaaagaagacattagatatcagctagttttgatgctatatattttatatgtcacacattttatgcactcttcacacattgttaagtgcttaccttgaaaaattactctataggtttgaggtcactctacgtactcatttctgaaagcatgtctgaattggactatttgcaggtacaaatccacttgctcttttaaatatagtagagttatttacctatttatgaatactgtggtgtacctaatacttatcaattcctttagctatttcatagttatacttaataaacaacttggcattcatcactattgatattcgttgtatagcagtgattactagcaggtgttactgaaccccatggacattagcatatatccatatatttctcaattatctacttcttgttcctcttattgctattggcttttttttttttgcagcctgcaattggtatagttttgggcttcatagggacaaagatggtctttgacttttttggtgagcaactagaaaccacattagtgcacgcaattgtcaatactttcttatatacattgcggttcaagctatgttttggtttctccattagcaacaccagatgacaatgttgatctgtggcaggttatcatataccaactgaagcttcgcttgctattgttaccacgtgtctaagtggtggagtaatattgagtcttaggaaagcatcaactgaagaaaaggacaagtagccggcttgctggagaggaggtaaaagggataaattaacttggtgtttctttcacaggtagtcatactacaacaaataaattgtatcaatcatttaataagctagaaaaaagtacatcttttttccgaatgttacttgtatgcctatgtcaaagaaccagaccgacgaaacatgtaataagtcatgtatgtaggattaattaagtctttctcatttaaatagcttatctcccagatcagaactaattttgattttttttaaaaaaaaaatgcagtgtaaacgtgaactgccagttagtaaaggccattggttaaacaagtgtttttttttctatcctagtattttcagaccaggttcctccatgttttgctggcagtcacatctggccattagttatcagtcatgtcatgagctgagagaaaagaatccaagaattatctgattttttttttgcagtgttgaccttatgtattgaacagaatacttgtgatatctgtgctccaggaaacatacttatattttttgctttcttccaggtcgaatgaaaatactgcttcctgagagctgctccttttatctggatgcaggggttcatcaatgcatcatttactttgatcaccagatgtagagcagtagaggaggtccttgaggagttttcacaagacgaccactgggcttgtacgtatagtaatgctcgtgtggttttgaaggcaaatcacaaccagtggttttgatgtgtgacccagtatagaattatgaggttgatgactgccaaggcatgaagactggtgtctgacatccaaatttaaggccatgtacgccttggttcgtcttgaagcagaagggttagtggaagatccaaaacagcagcagcctactaggatgactgactggcatggtaatcataattcttccccttttttttgagcttgtaaaacaagctcacaagcatgacatgcacaagcaatgtcaaattttattgcaacaaaacatatggtgtatagctgaccattatattttggttcgtttagctactgatccttattatgtggttatattaaactgttgtgattcgtgggtctgagagcattatctgaaatcccttgcaac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0121200, RefSeq:Os05g0121200