Difference between revisions of "Os05g0121800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0121800| Description = Conserved hypothetical protein| Version = NM_001061036.1 GI:115461802 GeneID:4337656| Length = 4146 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0121800|
 
GeneName = Os05g0121800|

Revision as of 20:03, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0121800

Description

Conserved hypothetical protein

Version

NM_001061036.1 GI:115461802 GeneID:4337656

Length

4146 bp

Definition

Oryza sativa Japonica Group Os05g0121800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1173125..1177270

Sequence Coding Region

1173258..1173354,1173521..1173721,1174318..1174599,1174680..1174714,1174799..1174888
,1175671..1175800,1175873..1176447,1176574..1177005

Expression

GEO Profiles:Os05g0121800

Genome Context

<gbrowseImage1> name=NC_008398:1173125..1177270 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:1173125..1177270 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcgctctcgctcatcgacgtggccgcggaggacgacctcctgctcgacctcacctcgcccccgccgctgcatcccgatccgccccacgcagggtgtgatgaggtgatggccgccgaggcttctcgcctggatcccgccggcgattctccggagatgaggcgggttgtggatccggatggcgctacggaggaggcccctgagcagtcggagtctccgaagcggaggaaagcgaaggccggcgttaatctccgcaagagcttggcttgggacagcgccttcttcaccagcgaaggtgttctggatactgaggaattggctgttgtaaacagcacattccgcaaggcacagggttccaggttgcctggaatcgctgaggaaatgaggaggtcaggggagtcaacaacttcgactcttgaaagcgaaagctgggtgatggaaaatctggagactgagctgtttgacaacgtccgtgcttcgatccagagatcgcacggcaatcctggaaaagccccaggtgttactgctgttatctcaaaacccccgaagtccaaggcaaatgttcctcgtgttgcagcaaggaagggggttgatctgatgcctcagagtaagataagggcccctatttccacaagccagggtgctgctggaggaaaacaaaggatccaagctaccttgaaagagcctacaactgcaagagtgcctatttcaggatctacagaagtaaaaccatctttgaaacctccgagggctctaccaagagttgctacaatgagagcgccaactaatacagctgtggcttctggaattccagacaaaaggagcagcactggaggtgtggtcaacaggcagacagttggtaaatctgtcaacaattcagttagcgcacattctaggcctggtggagtgacaaaatctacttcaacttcaaaatcaggtgccttaccatcatcattatcatcatcagcagcagcaacagcagcttcaattggtaatatgctaggtcaaaaacctaaatcatcaaccctaagcaacaagagcagaattgctcaaaggattcctgttcgttcaacgtcaaggactgatgtcaacaaagctaacccagcaagagcatcgagaaataatattccaactgggggcaaaagtaatcgtgtatctccaagcatttcgcctagcagttctgtggacagcttgagttctgtggtttctggggcttcaacagcttccactgtagggaagatgagccatacatctgagagcttcagtacacggtcttcttcattatccccttccctcagaaatagcaatgaccacgctccaacaagagcagatgcagacacccagggaaaaggttccaaaccatctggtctgcgtatgcctacacccaaaattggttactttgatgcttccatcgaccaacagattggtgcacatatgcaagtgcagcccatgaagatccagtgttcacctcagctatcttctgctcaaatgggggacccagcatcgtctatcttgagtcagccggaatcgagactcgcagcctcacctcatgagaaaaaaagcagtgtccagagcaaggcatcacctttactcccccttgaagttgtacagatagaacttgagccttcccaggcgatggaacatgaagtgtgcacaccccagccctgcccagtggtagcagcagcagcagcagcagcagcagacacagcaaaggagaacattccggctctgcatcagaacatccagccaaatgatggcgctggttcgttagcagttgatctgatttgccagagattgtccaccatttctcttggggacgccaccgacctggcctcttga</cdnaseq>

Protein Sequence

<aaseq>MEALSLIDVAAEDDLLLDLTSPPPLHPDPPHAGCDEVMAAEASR LDPAGDSPEMRRVVDPDGATEEAPEQSESPKRRKAKAGVNLRKSLAWDSAFFTSEGVL DTEELAVVNSTFRKAQGSRLPGIAEEMRRSGESTTSTLESESWVMENLETELFDNVRA SIQRSHGNPGKAPGVTAVISKPPKSKANVPRVAARKGVDLMPQSKIRAPISTSQGAAG GKQRIQATLKEPTTARVPISGSTEVKPSLKPPRALPRVATMRAPTNTAVASGIPDKRS STGGVVNRQTVGKSVNNSVSAHSRPGGVTKSTSTSKSGALPSSLSSSAAATAASIGNM LGQKPKSSTLSNKSRIAQRIPVRSTSRTDVNKANPARASRNNIPTGGKSNRVSPSISP SSSVDSLSSVVSGASTASTVGKMSHTSESFSTRSSSLSPSLRNSNDHAPTRADADTQG KGSKPSGLRMPTPKIGYFDASIDQQIGAHMQVQPMKIQCSPQLSSAQMGDPASSILSQ PESRLAASPHEKKSSVQSKASPLLPLEVVQIELEPSQAMEHEVCTPQPCPVVAAAAAA AADTAKENIPALHQNIQPNDGAGSLAVDLICQRLSTISLGDATDLAS</aaseq>

Gene Sequence

<dnaseqindica>134..230#397..597#1194..1475#1556..1590#1675..1764#2547..2676#2749..3323#3450..3881#aacgtctctctccccagctcgccgccgccgcctctcccccaccccgcggcgatctagggtttggacccccgcctccgccgccgccgtcgctgtctcccgcgcccggccggacggcctcccctccctccctctcatggaggcgctctcgctcatcgacgtggccgcggaggacgacctcctgctcgacctcacctcgcccccgccgctgcatcccgatccgccccacgcaggtgagaacgaacgaacgaacgaacgcacgcccgttgctgtctcttgcgcttcgttttcgatcgagatttttggggggtggaatcgtggtgtctcggggttgattggtgctgtggggttgcttcgatctggggatctgacggtttcgtgctgcgattttcgttttagggtgtgatgaggtgatggccgccgaggcttctcgcctggatcccgccggcgattctccggagatgaggcgggttgtggatccggatggcgctacggaggaggcccctgagcagtcggagtctccgaagcggaggaaagcgaaggccggcgttaatctccgcaagagcttggcttgggacagcgccttcttcaccagcgaaggttgtgcactaaccaaattccccacccatgaatgaaattgctggtgttcagtagtatttgtttcttgttgtagacttatagtagactcctgcatcttttgatgtacatttcgatttagggatctctcccattcctcactgtcgtgatgatggaaacagaagggttacagaatcttagagggaaaaacagcaccaggctgcagtttacaggcccagcaccagatggcatgcctgtaatctgtgtttcttcacaagcactaacagcaatattcggtcacacgctgcatcattatagaagaaccactcctagttcccaatgttttggacagtgaattttttaaaatgctctcgtactgctgttgatctagtccttggtttgtcagcctgtcatccattttccgttgcaaagctaccaattcctttcagtctttgagcattcacttgttttgaggcagtttgatagcagctctgaagtcctaacatttccctttctgttttttttccctgcctgtctgatgtgttcccattccttattacagtaggcaaatatcgtaatgtagatatgtatcagttcctaatgttttctggtttgagcaggtgttctggatactgaggaattggctgttgtaaacagcacattccgcaaggcacagggttccaggttgcctggaatcgctgaggaaatgaggaggtcaggggagtcaacaacttcgactcttgaaagcgaaagctgggtgatggaaaatctggagactgagctgtttgacaacgtccgtgcttcgatccagagatcgcacggcaatcctggaaaagccccaggtgttactgctgttatctcaaaacccccgaagtccaaggcaaatgttcctcgtgttgcaggtaagaagcttcttctgagttttattatctgttggtttcatgtttgtaactgatgtagttattctttttgctacttccagcaaggaagggggttgatctgatgcctcagagtaaggtatatagcacaattcatatatggtttgatctaaaattatagtccttgtccatcactgaccaaaatttttcgatgcttgttcagataagggcccctatttccacaagccagggtgctgctggaggaaaacaaaggatccaagctaccttgaaagagcctacaactgcaagagtggtatggtccatgctagcagatacattacattaaatgtgttgtagtttagttgtttacattcttcatagtcccttaacatttaaaagttaaggggctatgaatccttctcaatggtttgaatctaggcaaaatttgctacaggacacttaaaatttgtgtaacttgctggtagactcacggctgaaagacatcacaaaaaatttgctggaggacactttcggctcaattgtaaagataaattcttcaaaaagacgagaatgcccctagggtcaaaagcttttgagctcaagcttggtactaggggcattctcgcccttcttaagaattcatctctccaattgagtcgaaagtgtcctctaccaaattaccaattttttagggtgtctttcagccgtgacacgtttttgcgatgtctatcagtaaattacacatattttgattgtcctgtagcaaaatttgccttgaatctattgtatgatggttaagccaaaggcagacacaaacagatcacaaagaactagaatgtgctagtttaaatgaataggaaattatgtggtattcttatcttaacaatgaaaatgctgcttgttagaacaacatggtctgctgaatcgttttctaagtgtctaagttcttactattatttattgaaatctgagcgatggatatacaatttgtgatgtttcagtttgcgagatgtagcttcactagcttccccatttccttatcttagttatgcaatattctggaattaatttcatttcaactctctgcttgagaagcctatttcaggatctacagaagtaaaaccatctttgaaacctccgagggctctaccaagagttgctacaatgagagcgccaactaatacagctgtggcttctggaattccagacaaaaggagcagcactggtgcgtcaacaatatagattctatctgctataatgtttataggtggcaagactaacatgtattctcttgtaggaggtgtggtcaacaggcagacagttggtaaatctgtcaacaattcagttagcgcacattctaggcctggtggagtgacaaaatctacttcaacttcaaaatcaggtgccttaccatcatcattatcatcatcagcagcagcaacagcagcttcaattggtaatatgctaggtcaaaaacctaaatcatcaaccctaagcaacaagagcagaattgctcaaaggattcctgttcgttcaacgtcaaggactgatgtcaacaaagctaacccagcaagagcatcgagaaataatattccaactgggggcaaaagtaatcgtgtatctccaagcatttcgcctagcagttctgtggacagcttgagttctgtggtttctggggcttcaacagcttccactgtagggaagatgagccatacatctgagagcttcagtacacggtcttcttcattatccccttccctcagaaatagcaatgaccacgctccaacaagagcagatgcagacacccagggaaaaggttccaaaccatctggtctgcgtatgcctacacccaaaattggttactttgatgctgtaagtaaatttagtgttttcttttgtctggtccatttagtattttcttcattgtgatcatgaaagtattcttaattgatggcattacaaattataatctgtgtcgtatgcgtttgtctccagaagtccatcgaccaacagattggtgcacatatgcaagtgcagcccatgaagatccagtgttcacctcagctatcttctgctcaaatgggggacccagcatcgtctatcttgagtcagccggaatcgagactcgcagcctcacctcatgagaaaaaaagcagtgtccagagcaaggcatcacctttactcccccttgaagttgtacagatagaacttgagccttcccaggcgatggaacatgaagtgtgcacaccccagccctgcccagtggtagcagcagcagcagcagcagcagcagacacagcaaaggagaacattccggctctgcatcagaacatccagccaaatgatggcgctggttcgttagcagttgatctgatttgccagagattgtccaccatttctcttggggacgccaccgacctggcctcttgatcttgtagagggatttagtcgtatggtatgctggttgtttctgatacatccttattattggaaggcaattgcagctgaagttctttctctggcatgtgttgttttaactcttatgtcttgagtgtaaaatcctttttctgtacatcgcatgccatgataaggatttcgctctcggttgtaatcagattgcagaacacttaagagagttgacactgctatgtcaactacaggtttgcaagtaatcgtatatcagtcacatttgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0121800, RefSeq:Os05g0121800