Difference between revisions of "Os05g0144000"

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(Created page with "{{JaponicaGene| GeneName = Os05g0144000| Description = Membrane bound O-acyl transferase, MBOAT family protein| Version = NM_001061156.1 GI:115462042 GeneID:4337781| Lengt...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0144000|
 
GeneName = Os05g0144000|

Revision as of 20:04, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0144000

Description

Membrane bound O-acyl transferase, MBOAT family protein

Version

NM_001061156.1 GI:115462042 GeneID:4337781

Length

7277 bp

Definition

Oryza sativa Japonica Group Os05g0144000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2507023..2514299

Sequence Coding Region

2507340..2507381,2507464..2507513,2507602..2507677,2507941..2508018,2508410..2508491
,2508589..2508681,2509007..2509116,2509274..2509336,2509736..2509787
,2509864..2509988,2511124..2511237,2511721..2511780,2512176..2512246
,2512371..2512435,2512538..2512641,2513387..2513435,2513514..2513695
,2513792..2513847,2513934..2514027

Expression

GEO Profiles:Os05g0144000

Genome Context

<gbrowseImage1> name=NC_008398:2507023..2514299 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2507023..2514299 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtggaggcggctggagctcgccgcgctctgcgcctacgcgctggggttctacctcgtcgtgatccggaagtcgcttcgcctctctcatgattactctgggaggttgtacggcctacgagcaggctcactcgctggccatctgaacgacttgtccgatgcacaatggagaaatttccgggggaacttacctgttcttaccattgtgatgggtgcatttctgatgttggcgaatatgcttcgctactgctacagcttgaagggaagaggggcctctttggtgtggcttctcctgtctgtcacctatttatgctatctacatggtgcttgtgttagtttcattctcctaatagcattgattaactactccatagtgaagctattttctcgatataaatattgtgttgggctcatttggagcttcaacttagctgtccttatacttaaccgagtctatgaaggctattcattctcattgtttgggcaacagcttgcttttctagacaatcatcggggtacatttcggtggcacatttgcttcaattttgttgtattacgaatgataagctttggatgcgattactgctggtcactccggtcttctcagtttgatcataagaagcatatgcagcgatgccaagtttgttattctggcaaaacatgctactttgctttgcaggagagagcgctcattggtgacaaatacacattactaacatatttatgctacttgacatatgctccactctacatcgctggacctattgtaagctacaatgcatttgcagcccagttagatgcaccccagaaaaattattcagttgcacaaatatcttggtatggggtgaggtggatcctaagtttccttcttatggaagctatgacacattttttccactacaacgcctttgtagttagccgattatggcagcaattatcgccatttgagatcttcatcattagttatggggtgctgaactttatgtggttgaaattcttcctgatttggcgctacttcaggttttggtcactggtaggaggagttgagacgcctgaaaatatgccaaggtgtataaataattgtcatgatctggagagtttctggaaaagctggcatgcttcttttaacagatggttggtcaggtatctgtacattcctcttgggggtgctcaaagaaaactacttagtatctgggtggtattcacgtttgtagcagtttggcatgacctggaatggaaacttatttcatgggcatggttaacatgcttatttttcgtccctgaaatattggtcaagtctctatccaacaagttccagccaagaagtgcccttgggttgttcattcaccgggagttaagtgcaattgctggtgctgtgacaataagctgccttatggtggcaaaccttgtcggttatgttgtaggaccctccggcattaaacttctcatgtcacgaatgcttgggaaggatgcccttcctgtccttgccttcatatttatctcattctatgtgggagttaagcttatgtttcatatacgtgacgcacatgagaatcaagggtga</cdnaseq>

Protein Sequence

<aaseq>MSWRRLELAALCAYALGFYLVVIRKSLRLSHDYSGRLYGLRAGS LAGHLNDLSDAQWRNFRGNLPVLTIVMGAFLMLANMLRYCYSLKGRGASLVWLLLSVT YLCYLHGACVSFILLIALINYSIVKLFSRYKYCVGLIWSFNLAVLILNRVYEGYSFSL FGQQLAFLDNHRGTFRWHICFNFVVLRMISFGCDYCWSLRSSQFDHKKHMQRCQVCYS GKTCYFALQERALIGDKYTLLTYLCYLTYAPLYIAGPIVSYNAFAAQLDAPQKNYSVA QISWYGVRWILSFLLMEAMTHFFHYNAFVVSRLWQQLSPFEIFIISYGVLNFMWLKFF LIWRYFRFWSLVGGVETPENMPRCINNCHDLESFWKSWHASFNRWLVRYLYIPLGGAQ RKLLSIWVVFTFVAVWHDLEWKLISWAWLTCLFFVPEILVKSLSNKFQPRSALGLFIH RELSAIAGAVTISCLMVANLVGYVVGPSGIKLLMSRMLGKDALPVLAFIFISFYVGVK LMFHIRDAHENQG</aaseq>

Gene Sequence

<dnaseqindica>6919..6960#6787..6836#6623..6698#6282..6359#5809..5890#5619..5711#5184..5293#4964..5026#4513..4564#4312..4436#3063..3176#2520..2579#2054..2124#1865..1929#1659..1762#865..913#605..786#453..508#273..366#ggtcgccggcgacacgcaccaccgtctccgcctccgcgccgccgccgtcgtctccgccgcctccggtggaatcctcgccgcggccccgtcacacctcatcctcttcgcttggccttctccgcatccggttattttaggtcggagaaggcggcggatccgccgctcgccgggcggatcacgctccctcatcattggtatcaggggcggagacgcgagcggtgagcctccccgccgttgggagagatcttcacttgccaaactcaattctcagcatgtcgtggaggcggctggagctcgccgcgctctgcgcctacgcgctggggttctacctcgtcgtgatccggaagtcgcttcgcctctctcatggtatccaatcgtctcagattccaaaatcttccattgctgttaattttggaactgcttcgcatcacattatcgcttggtttgtgcagattactctgggaggttgtacggcctacgagcaggctcactcgctggccatctgaacgtgtgttaaattcctcccattcctttatcagtgttctagttttatctgaagattgaggagctacgcatctgatttccttgcattctgtcgttgcaggacttgtccgatgcacaatggagaaatttccgggggaacttacctgttcttaccattgtgatgggtgcatttctgatgttggcgaatatgcttcgctactgctacagcttgaagggaagaggggcctctttggtgtggcttctcctgtctgtcacctatttatgctatctacatggtgcttggtaggaaactgaccaatgcttttcgcttgttcttctccaatatttgtaaagtttctgacatatctatctctatggcagtgttagtttcattctcctaatagcattgattaactactccatagtgaaggtcagtgctagcatctttgatcaaaactactgttgatttcagttgtcttagtcgttgtttttctgttttccttttttttttgcataaatatatagataggcaatgccacaaacaaaagtacatggagcaaaacagaatgcttttttgttcatattcttgttataggtattagaggtagcatatttgtcaatcgagcatatgtttgtggatgtgcacaatgtatgtgtatgtttaacggatgcaactttctcaacgtgatatagaaaactgaagactactccacaggtgcatatgatatcaagcacataaaagataagaaacatagtacacatcaactaaagaagagacactgtgataacaggaatgccagatcaatggattttttaagtcattattcaagggaaaactaagactctatgttggtaaaattcatttgggatgaattttcggtttatgtattgattccaaatgtttcattcatcaactagaactggtcaacacaactattacaatattgttggactgagtggttaaacatctagtcaggttggttgaaaatggtgtcctcagttaaggaattcaagttaacatgctgtttattatgtgattattgtcaacctgtaagtggtaccttagttgtaagcaatcattccgactgtagtgttgacatcactgttcgattttctctgttctaattgattatgggtttaagttttgcttttgaccatagtattctctcttgcagctattttctcgatataaatattgtgttgggctcatttggagcttcaacttagctgtccttatacttaaccgagtctatgaaggctattcattctcattgtttgggtgagctgttctgaagctgctctatctgtatgatgcaattcctttcagtgaggttccttttctttttaatttttgtgacgtttgattttcttatcgaaataggcaacagcttgcttttctagacaatcatcggggtacatttcggtggcacatttgcttcaattttggtatagttctccttttgtcatcttgatttggttgaaatcatgtttatacgaatagcttttgatgtttactatgtagaaatctataaacgtgttctccttatgccccatttgatttgtctggcagttgtattacgaatgataagctttggatgcgattactgctggtcactccggtcttctcagtttgatcataaggtattatatttcctgatgacttgtctttttgtaccacattatctgtacttcattattggaacatcagatgctttaaatcacagaaacatagttttaaaagcacacattacatccctgttggtccataagatctgacactcttaacaaatctgatcttgtgttttcttattcatcttggtacattttcaaaacaatatgtctacttgtcttgttttaaatgttattggataaattataaagttatatctgatatatgttgtgtacctcatgggaaactgataagtttatgaacaactcttgtagagatctgtacctgtaaattagtaaatttatttttgaccatacctctgtcttgtcagtactgcactgtactgaaatgagttgccttggtacagaagcatatgcagcgatgccaagtttgttattctggcaaaacatgctactttgctttgcaggtacttatattttcatacttcccttgtcccaataaaaatactgttgttgatagtgctgctctaatgtggtactgattcatggtagtgtcttacagccattgttggttttaccattttggaagcattacgacggtatccctttagtttccagcaaaataagtgttgacacagcacagaatgaaactagtggttttgttgaaagatgttgataattactaagcgtaaatgaatggttaacatttctgctgataccaggttgaactgttctgagttgttagttgcaatataaatattttctgagttacttgtaatgtaggtcttgagtcttgacattagtgtatcttatttacctttgtttatggtattatcatttgaaatttgcagctttgatagtgactcttgtatcctacaagaccttcctttacaaagcatactatattcactcttatatttgttgatagaattttgcattgttcttggcaggagagagcgctcattggtgacaaatacacattactaacatatttatgctacttgacatatgctccactctacatcgctggacctattgtaagctacaatgcatttgcagcccaggttggtctgtttcttatagataatgattcaatgcagctgaatcggttagatgaacttcaagctaaaagcagcagaaataaatattaattttaagaaaatgaaaggaagaaggggagagaactaccatttaaattaaaagatgtcaaaattgaacagaaacaaatattgctttcatgaatgtttctctctatttttcatttacaggtcgtgctttatgaaatgaagatgatatcaaatttgacatgattctttggctatagtagagctaaaacaatactttcataaaagctgaacatgtgacaatgacatcatatattaatgcatttttgacctgtgcgcctgtcaattttatgtacaatgcattgccgtgacttagggatttatttcatgcgaagggttagcgtgggggacttgatcctgatccaaactctgaccttggcttaggtgtagacttaactttgagctaatttctttctttcccttcttatactcattaattgacaagtgacatcctttatgcactgtgaggttctgtaaacaaatcttgactagaaatgaactggtgtatttccaaacaattttttaactaggatagcgagtgattataacaacttgtctctaagttgatgtggttgagggaccagcctttccctacatcaggcactaatctatttttaacgtctaattagatcagggccctttgccactgccatcttagtctaatctacaaaaatagacacaacatttacatccttctttaatatatttggaagtcattaaaaggaatttctgaatggtccttaacaggttaatctattatctgccatagttgttaacaacgaatttcagctctgaaaggtaataatataaaagatattagcaatttatgtgtagtgaacagtaaaagggcactagctattatgaatttgctttccctgtctataaatgagttatgcctttgtttcttccttttttgttttgcaaaaatatctttgagcttgttataaacgatcttaaatggtactgaccattgggtgactttaggaactatataagtagtaagttttattagttggatatagtgtagaaatatcttgacaaatactaacctgttcttgttgtagcgatcttgcagttagatgcaccccagaaaaattattcagttgcacaaatatcttggtatggggtgaggtggatcctaagtttccttcttatggaagctatgacacattttttccactacaacgcctttgtagttaggtacatgcttatctttatatagtataatcaatccattctttttttactatattctgattaattattcttttgacagccgattatggcagcaattatcgccatttgagatcttcatcattagttatggggtaagattatgttgtacatactgcattttctagtatatactccggtttttccttcagagttgtcagttatggaatttttcttgcatcattttcaacaatatgtagcagttgatattaccattttattacttattatgtttttattcaagattgaatacaagttttcgtgatctcctgtatgaatacgtgtcctgacttgcaatactgtatatttgtttccaaagttgtctgcctaggttgttttctactttaatgcgttaacttgcatgcttaccatatccacggtcctgttgctattcttaactaacatactgtagcttcttttttcaacttggtataccttgttgttggggttaataatcatcaataagcattgactatcaaaactttcttatgcaggtgctgaactttatgtggttgaaattcttcctgatttggcgctacttcaggttttggtcactggtaatttgaacatttaaaatcaatattgattcatcatgcaccctgcatgctttaccttttgatacaagggaacattgtcaataaaacaactgtgttctcatatccgcactgttttatgtaatgttttttgtgttttatgctgagtgtttcattgcaggtaggaggagttgagacgcctgaaaatatgccaaggtgtataaataattgtcatgatctggagagtttctggaaaagctggcatgcttcttttaacagatggttggtcaggtttgtgttaaagtagctgctttaagtactaatttatgaattcatctgtgctaccatgcatatatttcattttgaagttttggggttaaaactttattcctgttcatagcctcacttctttaacatatgctcaagaaacgcatgcaaaaaactgtcatatgtccgcttagacagagtttaggcctatcaacattattacataaccccatgcttacacagagttggtatgtgtgcataccaatgtgcatctgtagtcaatccataagtattaatagtcgataaaattaagtttaactttctttgacatatgtctttcttgttgcaggtatctgtacattcctcttgggggtgctcaaagaaaactacttagtatctgggtggtattcacgtttgtagcagtttggcatgacctggaatggtaagttctgtaaaatttataattgttatttttgtttggcaacagctaggttttatgatgacttacgatgtcaatttgattgcattctcataaacaggaaacttatttcatgggcatggttaacatgcttatttttcgtccctgaaatattggtcaagtctctatccaacaagttccaggtaaagttcccttgtgtgatttgataagacttcataacctaaaggataaagcagcatttctttttctgttgttgcattcatttgcttagttgcaagaaacaaacttaagtattttttgtatggaaatttgtgagatggtaaagttgttttactaccatgttaagttactccctttgtttggaaaaataaaccagtctgtacagcttgagtttggaaaggaatactagatacttctaatttaaggtacaaacaagaacaacagcatggcaaccatatatactccaaactaataagtttttgttttctcatgcattgatggattcttcatcatgcttgtttgatgtcgatggaaatttcatatgattagtagctaatgtatttaaaaatgtagccaagaagtgcccttgggttgttcattcaccgggagttaagtgcaattgctggtgctgtgacaataagctgccttatggtacgtcttttttttgggggggtatttgaattcatatttaaatgtattcaaccgattattctcttacttcgctactggtttactacaattaaagattcctggcaccaaatctcctaggaaaaagtatgcatgcaacagcatttgttgtcaacaaagattcttttagagtaattcatatatcattaaatctaggattttcagtcttacactagatgggtcacatccttgttccgcattgatactgatatgctccactcatgcaggtggcaaaccttgtcggttatgttgtaggaccctccggcattaaacttctcatgtcacgaatgcttgggaaggatggtgagttgcgaattcacatccattatttcatagtgaatttcattcagtcatacggcctcttcagctgacgcctgtgtctattttgcagcccttcctgtccttgccttcatatttatctcattctatgtgggagttaaggtgattcctttgctaattactttctttttgacgctacaaaataaaggtgattccttgtctcacagctggtaaacttttgcagcttatgtttcatatacgtgacgcacatgagaatcaagggtgataactgataagtcgacggggaagaactcccactgtaaaatgtagacaagcagctgcgatgagacgctgtcaagactcaagacaaataggcttacctcttcttttatgggatttgtttgacacgaacgaaaagctcctctgaccgccgagctttggctcttctgtaatgtagggcttattgattggggtagtgaagataatagagcacaaatggaaatggtactacgagctctgtttttaagagtggaaatgcagggcacactccattggattgaaggaatttcaattctcagacaattttcctatgagctcttttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0144000, RefSeq:Os05g0144000