Difference between revisions of "Os05g0163400"
(Created page with "{{JaponicaGene|
GeneName = Os05g0163400|
Description = Zinc finger, RING-type domain containing protein|
Version = NM_001061271.1 GI:115462272 GeneID:4337902|
Length = 708...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0163400| | GeneName = Os05g0163400| | ||
Revision as of 20:05, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0163400 |
|---|---|
| Description |
Zinc finger, RING-type domain containing protein |
| Version |
NM_001061271.1 GI:115462272 GeneID:4337902 |
| Length |
7086 bp |
| Definition |
Oryza sativa Japonica Group Os05g0163400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:3696376..3703461 |
| Sequence Coding Region |
3696595..3696732,3696836..3696982,3697064..3697162,3697244..3697695,3698039..3698722 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:3696376..3703461 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:3696376..3703461 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggctggacatcagtataataattcccagatgtcccggatggatcatatggacaggctaaacaatgaacctccaccttttggccaaaagttatttatgcatcctaggagtgatccagctaacggagctggatcgtctggctatgtgggtaacacaatgagatcgaatgatcttccgtcttcaagttatgctggccaagcttatggtcagcagaatagagcccccatccatgcttcatattctggtcatgcacctgctggaagctctagtggtagctatgcaccatacaatactcaacatatgcctgcttcaagctatccacacggatccgaggataatttcattccaagttcccatgtggatggcagaagggttgcattgaagagaagaaatcccatcattcatcctacagatggattcggtgttggaaattattatgctggcagttcttccaatactcagttctctcggcccatgcctccaaatcctattccacctcctgaatcctgtgttcgaatgccctcacacttgggttcgaaccactggaatgatcaccgctatgttaatcatgaaggatctcagaggaatgtgaggggaagacatgatcatagtactatccatttggaacaaagtccagctgcagcttgcccgtcaagcagcatcaatgtgccaccataccatccaaatgcaaatggtccttttggaagtgcaccagtacaacgtgacagagctcctttatctgtgcatccaagaattcttcctccagggcctgatggtagtagcatagcattcagagagaggccatactatcctgctccacagagcaccaacataagtgcacctgtgccaacgcttcctatttcttgtgacagtgcaccatttgctcatggtgggtacgcccctagatcagctcatcgtaacaacttacgcacttatcctcctccagcttttgcatcttcttccaaccctggagcagtctcccatgagccagctattcctagctatccacctgctgcccctagctatccacctgcaacctctgcagcatcatcaagtgtccagccatttcatgctgaagctgctgcacatttgaggcatccaaggcatgtatctgtagggggcagtggtagtgcaaggagtagaaggatgagggattcctatcatggttttcatcatttgatgattgaagacaataacttgggaagatcagcagctgagcggtttatgatgctggatcagttagttatccatgaatcaagagaagcattcgatcctcactgggacatgagactggacattgatgacatgagctatgaggagctgctggctttggaagaacgcataggccatgtgaacactggcctcgctgatgagaaaatttctggctgtgtgatggaggtagcctgctgcagcagtagtcatttgcaggatgatcaggacaatgaaagatgtgtaatctgcctggaggaatacaagcatgaggacacacttgggaggctgaaatgcggccacgggtttcactgcaattgcatcaagaagtggctgcaggtgaagaacacctgcccagtttgcaaagctgctgccgcagatgaaggcagctga</cdnaseq> |
| Protein Sequence |
<aaseq>MAGHQYNNSQMSRMDHMDRLNNEPPPFGQKLFMHPRSDPANGAG SSGYVGNTMRSNDLPSSSYAGQAYGQQNRAPIHASYSGHAPAGSSSGSYAPYNTQHMP ASSYPHGSEDNFIPSSHVDGRRVALKRRNPIIHPTDGFGVGNYYAGSSSNTQFSRPMP PNPIPPPESCVRMPSHLGSNHWNDHRYVNHEGSQRNVRGRHDHSTIHLEQSPAAACPS SSINVPPYHPNANGPFGSAPVQRDRAPLSVHPRILPPGPDGSSIAFRERPYYPAPQST NISAPVPTLPISCDSAPFAHGGYAPRSAHRNNLRTYPPPAFASSSNPGAVSHEPAIPS YPPAAPSYPPATSAASSSVQPFHAEAAAHLRHPRHVSVGGSGSARSRRMRDSYHGFHH LMIEDNNLGRSAAERFMMLDQLVIHESREAFDPHWDMRLDIDDMSYEELLALEERIGH VNTGLADEKISGCVMEVACCSSSHLQDDQDNERCVICLEEYKHEDTLGRLKCGHGFHC NCIKKWLQVKNTCPVCKAAAADEGS</aaseq> |
| Gene Sequence |
<dnaseqindica>6730..6867#6480..6626#6300..6398#5767..6218#4740..5423#4562..4643#tttcttttttatttttttcttcgaggaggaagcaaacagcgtcgctccacgaaaccatcgctgcggttgcgtgctcgcgcgaagaagaggagagagaggaccaaaccctcgtctcctcctcctccggtggtggggggagaggaggcggcggcggagaggacgagccgtctactggatcggccgcccacgaggaggtattgcccccgttcccctccgattcgctccccccaaattccccccgcgtaataatccaagggtttgtgttgatcgggtggggttttctcgccgggtagaccatttcctgcggttgattgttggtgcgtgacgggagcggagcgtgatcgggtatcggacgtggtcggattgatgggggaatttctgggattactcgtcgtcggcttaataatcgatgaggcgggtgtgatgtacagcggcgcgattggtcgattcaggtttcagagtgcttgagatcatgtgatttccgctgcgaaggaagttttcatctcctgtgactggaatcacgcgctaatccgtaccgaactctctctattggggcgtcctgttggtgtcaaacaagccgttcacagcgatcctgtctgttcataactattgtttgcctagttgcaattaactgtttatctttgtcagtctaatcttttggccataggttgttctcgccccctaatcagttgttggaacttatctttgtgctttagcttctatggatgagtcgtaggtgtgattgtttagtagtaaaattatttgagtttttgtcttgttcaaatcacgcatttaattggaaaatgttcctcaccaccactgagtctttcagttctatcaaggagtcagcatcttctggcccagccttttttgcgttgctacactttagttcgagagtctcatacatacttgagccaccaactatatacctttggagatttttcttattttccctcttaggcacaatattgacatagtaaaagtacatcataaatttaacttcaagagctaagctctactaattaaagtggtcctttattcttcttattgtccatgtaagaatagttcagtgagaagagttatttgacccgtgtaacttttaagtcagcaaacatttttgtttgactccttgtcctgtctattagcagcctagcatggcatctttagttgaactcttctacaagggactacactatctaatgtgttatcacagtttcttatgtaatagaaatgcaattcatgtcatttcttagcatctaaatgatcaacggatagaaaaaaaattatatgacgtgtataactcatgctatatctgaaccttcaagtgtaccttcttctcatgatgcttctcccaatggaaagcatccctttaacccttccatccatattggttcttaaatttccatgtcttccatcagacagagaacatataagttctacaacctcggtttatccttagaagcagaaatgttcaatatgtcaaaggtacaactccgtgtcctttgctttgaaattcaacatcacttgcacaacatgtcttctgcatcttcaggtactccttattaacatttcaagactatctatatagtattttattttattagaaatgccacgaaaccaccatttattatgcaaatgcaggctatagtgagattcggcttccacaataacccacgaccttgaaagctgttattaagatctattagagttggacacaatctttggaacatgattcagttatgttgtgtgtttgactccacatttgggacacgcgggaattaggttgggtaagcaattgccatttcttccaataatctgatggtcaggtattcaggttagtgaatggttccagacatattagttgcatatatataatgagtaaattggaagttatcacttttaatcatcttaatcctttgtgtcattctcacctttacaaaaggacatataccttctcattcttctcccttttctcaaactgttataaacttataatagtttcctttgttttctctagcccttatagtttgttgctgttctaactctaaaaatgaaaactaaaacaaggggaatttatatctttgggaatactacctagctttttatcatacaaatgttgtgtaatacctttaccagggtattataactgttaatactttgaactgagctactaatgacattgcaggtactaattgattcttccctgtaatggagagttttattttccttgatttaccaaaatcaagcttacattaaggtgtaacaaatgggtgttttgggctccataatcattttgttgatgctaaatgctgactactggtgcagcaaatggaagagctcttccagttgatatatgccatttgaggacatgtgctttgtcctcagtataagaacattggcctaacatcattgttggagttgcattgcccttagagtggggaaagcgacacctcttgcaagatagtaacagcaattatatcataaattacaagtcaggccttccaatgtggttttggatgaggcaattgatacattgtcatttgatgctgaattttttgttcgtctgacgactggaaagggggcacctacgacgattagcttagtacttagtgatggtgtatgaagagcattgatagtctcatggcccattgctaacatgtagagaaggattttgagttccttggaagtattgactggaggagtgtgaactacttcgcaaatagatgggtgtaaaatctgggaaagaaaacttaaagagctaaatgttttctaccatattagttgatctgaaggtgctttccaagtcaaaatcagcttagcatatagaattgacttggtgatggcggtacctggacccttgaagcagcagttcagaactgattgcactgagtattttctctggagatatccatttgatggaggtggaaggaaagagaggctagtcaatagtaggtcaactgatggtgtttgaaacaagatgcacttactcataagcagaataaacaagcacaacaatgccatgaagggaaccttagcaatgccgtacatctggcatcatttaaaacggggcttgttccactgttatactatgaccatccgccttgatggttttgcctggctattctgaagctattagttagcgttacaccttttaagttttacacatccagtgttgttcttttgtttttctaatattatgtacagatatctctcccacatgtcatagctcaatatgacaagggctttatccttttccatgtaaatatttgagattcagtcagattcttatacttgctacttgctagaatgtgaatgataactgtactgttggaagagtgttgtcatacatacaaattagttataaatttgtttctacttttgctacttgtattgtcattgttacataagattgcaatgcatttgatgttccttgatgttctgatgttgtcttgttatcggccatactataattggggaaaaaaagaaatataaagctattttagtatccacaaacacatttttatgttttttgtgaaacatggtattcatatgctgttgtaacatgtatgccaatattatgttggtttgtcctttggagaaaagatgaatgtagtcttgatatttggacctattttgtctcaaatcatgcctgaagatgtaaatataaccatattaataggtgaatagtgttgaaatgttgtatgtttttgagcttgaagtcaaaacatattaaaacaaccagaatgcttcttagaatctacacatgcagcacaaccaatgttttgagctatcacttttactgagactgctgcaatctatcaactctgccttttcttgattatatcttttcccccatgaaatataaccaacatcatgtatgaaaaggtgcaaataattttatgtgtacaacacaaacatggatttgggcacaatatatttttggtactgtttagactttaagttgtcatggggaaatgtaatcggtgtcatagttatcctgcaaagtagtcatgaaattttggtggatttcgaattgttcaacagctgcacctttatcaaagccatgtctttatgcattggttcttaaattaagtgtcgaactgttgcttcctgcaacagattggtatgcaattccatttctggtttatatctggaactgctattctgcggccaaaacagcctttgttttggcttattttttgtctgaatacaatgctcagatttccttcgaagtgttcctggatatgtatgacaggaactttcatatgtgtagaatgctttgtgttaaattaagtaagacactggacatgatgaatcatttggcccatggcatctcagatctgtgtgactcaggtctcaaatataacgcttctaaggttgaaatgctttgttcctgaagtttatgaatttgtgattatgcatatattatcttgcccttctttttctagtttaaaacttcatgtttacagtccatttgcagctgcaatagatttgctggaaaactaatagagcaacttgttttcccagattaagccaagtttgatcagattgttcacgtgttatggctggacatcagtataataattcccagatgtcccggatggatcatatggacaggctaaacaatgaacctccaccttttggtacatggactaaactgaattacttcctaagtgttcataatcctctcattatctcaagtatggtaaatttacttcactcgtgccttattatgccaggccaaaagttatttatgcatcctaggagtgatccagctaacggagctggatcgtctggctatgtgggtaacacaatgagatcgaatgatcttccgtcttcaagttatgctggccaagcttatggtcagcagaatagagcccccatccatgcttcatattctggtcatgcacctgctggaagctctagtggtagctatgcaccatacaatactcaacatatgcctgcttcaagctatccacacggatccgaggataatttcattccaagttcccatgtggatggcagaagggttgcattgaagagaagaaatcccatcattcatcctacagatggattcggtgttggaaattattatgctggcagttcttccaatactcagttctctcggcccatgcctccaaatcctattccacctcctgaatcctgtgttcgaatgccctcacacttgggttcgaaccactggaatgatcaccgctatgttaatcatgaaggatctcagaggaatgtgaggggaagacatgatcatagtactatccatttggaacaaagtccagctgcagcttgcccgtcaagcagcatcaatgtgccaccataccatccaaatgcaaatggtccttttggaagtgcaccagtacaacgtgacagagctcctttatctgtgcatccaagaattcttcctccaggttagttttgacttcttctcttctatttgcagcttctgttctaatctgatgcgtactttagtctgaactgtaggtacgtaatcatatctcatatgtcaactactacttttttttcttctgtttgttgagataaacccaactcttatgaattatgactatatcagcattcatgattcatctagtagactaatgcaactacttcctttcaagcatagctttttcccactcaattttaatctagtccagtttcaaatgaaatgtgtgcttcctgataaggtggtatgcccattctctgaatttggtattatttaagaagctaagacctttctctgtttttgtctagggcctgatggtagtagcatagcattcagagagaggccatactatcctgctccacagagcaccaacataagtgcacctgtgccaacgcttcctatttcttgtgacagtgcaccatttgctcatggtgggtacgcccctagatcagctcatcgtaacaacttacgcacttatcctcctccagcttttgcatcttcttccaaccctggagcagtctcccatgagccagctattcctagctatccacctgctgcccctagctatccacctgcaacctctgcagcatcatcaagtgtccagccatttcatgctgaagctgctgcacatttgaggcatccaaggcatgtatctgtagggggcagtggtagtgcaaggagtagaaggatgagggattcctatcatggttttcatcatttgatgattgaagacaataacttgggaagatcagcagctgaggtagatattattctctcctcttgatatcagtacaatgttaaaattttgaacacgcatctaatctattttcactctttgtagcggtttatgatgctggatcagttagttatccatgaatcaagagaagcattcgatcctcactgggacatgagactggacattgatgacatgagctatgaggtagaaagaatcaattttctctttaataccacagcagctttagaatgctatttaaacaaatgcaactttttctatacacaggagctgctggctttggaagaacgcataggccatgtgaacactggcctcgctgatgagaaaatttctggctgtgtgatggaggtagcctgctgcagcagtagtcatttgcaggatgatcaggacaatgaaagatgtgtaatctgcctggtaagatagtggatggtaccaatctacctactatgatagcgattcccgcagcgcattttacgcaatacaagttacttaatccacaacctctttttcactgcaggaggaatacaagcatgaggacacacttgggaggctgaaatgcggccacgggtttcactgcaattgcatcaagaagtggctgcaggtgaagaacacctgcccagtttgcaaagctgctgccgcagatgaaggcagctgatgaggggaccaattgatcttcccctccatttatataatgatgcagttcaaggtcaggccaaattatgcctgtctccattgctccgcaatctgtgggctcttgtgaataagttatctcggtcgatatggaattattttgtgagctattagactattataaactcaagcaaaacctatgtgcaatgtaaatctcccaagttagttaatttcgctcaaaagc</dnaseqindica> 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