Difference between revisions of "Os05g0228400"
(Created page with "{{JaponicaGene|
GeneName = Os05g0228400|
Description = Helix-loop-helix DNA-binding domain containing protein|
Version = NM_001061506.2 GI:297604077 GeneID:4338155|
Length...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0228400| | GeneName = Os05g0228400| | ||
Revision as of 20:06, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0228400 |
|---|---|
| Description |
Helix-loop-helix DNA-binding domain containing protein |
| Version |
NM_001061506.2 GI:297604077 GeneID:4338155 |
| Length |
6565 bp |
| Definition |
Oryza sativa Japonica Group Os05g0228400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:7813745..7820309 |
| Sequence Coding Region |
7814363..7814500,7814784..7814843,7814985..7815035,7816778..7816831,7818264..7818329 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:7813745..7820309 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:7813745..7820309 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggttggtggcatgaaggaggagggctccatggctcaagctgcagccactgctgctgctgctgcttacagcttctatgggagccaccttgctggtgatcatcagcatgagatccaagcagcagcagcaggaggaggtgctagcaacaagtctcagctgagccagatgctcatggcttcctctcctaggtcatgcatcaccaccagcctcggcagcaacatgctcgacttctccaacaccgcggcgccgccggagctccggagccaccaccacaactccgataattcatcagagtgtaacagcacagcgactggttcggccctcaagaaggctagggttcaggcctcctcttcagcacaatctactctaaaggtgaggaaggagaggctaggggatagaataactgcacttcatcagattgtatccccatttggcaagactgacacagcgtctgtactgcaagagaccattggctatatcagattcctcctgagtcaaattgaggctctgagctacccttacatgggcgacgccaacgggaccggtcctatgcaaaatggaccagttggagaaaggaaccctggcctcttcccggaataccctggccagttgctaaaccataatggcaacactggagcacagcagcctgcagcccaacctgagcagcagggagcaaacgacgatggaaagaaggacctgaggagccgggggctgtgcctcgttccagtgtcgtgcacgtcgcactttggaggggacaatgccgctgactactgggccccggcgccgctcggcgggatcctacggtag</cdnaseq> |
| Protein Sequence |
<aaseq>MVGGMKEEGSMAQAAATAAAAAYSFYGSHLAGDHQHEIQAAAAG GGASNKSQLSQMLMASSPRSCITTSLGSNMLDFSNTAAPPELRSHHHNSDNSSECNST ATGSALKKARVQASSSAQSTLKVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYI RFLLSQIEALSYPYMGDANGTGPMQNGPVGERNPGLFPEYPGQLLNHNGNTGAQQPAA QPEQQGANDDGKKDLRSRGLCLVPVSCTSHFGGDNAADYWAPAPLGGILR</aaseq> |
| Gene Sequence |
<dnaseqindica>5810..5947#5467..5526#5275..5325#3479..3532#1981..2046#1562..1627#1258..1335#26..319#tgctgcagctgcagccagtgcatgcatggttggtggcatgaaggaggagggctccatggctcaagctgcagccactgctgctgctgctgcttacagcttctatgggagccaccttgctggtgatcatcagcatgagatccaagcagcagcagcaggaggaggtgctagcaacaagtctcagctgagccagatgctcatggcttcctctcctaggtcatgcatcaccaccagcctcggcagcaacatgctcgacttctccaacaccgcggcgccgccggagctccggagccaccaccacaactccgataattcatcagaggtaagattgtaatttgatcttggtgtgtgtagatcattagctctcaagtagtattggtcttgcatcttgttctcttttgctttgtcattttccaaaattttttttagataaatgtttggcattttttatggcttgtttcaattatacatgcatatgcatacataaggcaggatgcactgtaggtctagaggccagagatatgtattcttcatattctattttcttttaaaaaaaatagctacatggaatgcaatggattaccaggtgtatccaaaatgagaattttacgtgtttgacagatctttaggtttttcatcgagtatataagctatgttcatcccctctttgaaaagttgcagtttccaaagcatacttctcttcctcatactgctacacatgtttggtggaaaagttataagtttgatcatgttctccctaatgatcctctaggccaaggcttttacgggctgtcaatactcaattaatacaatctcttggcaatggtgcattctgtcctccatagttccacgaattgaaagtgtgctattattattatttatttccatgaaaaaggtacatgttttcatgtcccatgggaaatccactctggtcaaagttaccacttgatgttttgcatagcatgttcttttcatgatatcttggtaagagtgttggtcatgtatacagtatccattgacagagctagcttaacatgagatctttaatttggtcatactcttagccttgttcttctttatggctaactgctgtagtagtacatgagaggtcagtgaatgtttagatgtagaatcactggggagagaattcactttagagagggtagagagatgtgtgtttttttcttcttcttcttctcgggacaagatgaaattggggtcatgattattcacgctttgcctttctttgtctttctctagtgtaacagcacagcgactggttcggccctcaagaaggctagggttcaggcctcctcttcagcacaatctactctaaaggtttcttcctcatcatcctccctgctttccatggcacacaagccccatccctctctctctctctctctgcacgcacgcataaagtgtgcttactttggaagttcgtgcacagaaaatcacaacatttggcagtagtttccatttggaatatcttggattatgtagtatatatgttaacataatccttacattaggaggtttcttaggtgtgataatttgttttcaggtgaggaaggagaggctaggggatagaataactgcacttcatcagattgtatccccatttggcaaggtaacaaaaagacatgaaacttcagttaaccgctttcatggttaattttagagattagtaataagctagcaacaatcagttgcattatatatatataagtatagagggagatggattacatcaagatctgaatgtgttgtcatgcacagtatgcaaataggctatggatgacttagaatagttttattcatatgttgatgatgttacatgcaattatctatagtttgtgccatgccatgcatcgagccagtagcaaggtaagagtagctcctttatttctttgttgctggttttcactcgaggggttgtgtccaagtaaagtaaatctctgacacacgtgcctccttttacagactgacacagcgtctgtactgcaagagaccattggctatatcagattcctcctgagtcaaattgaggtccaatctctctctctcactttctatagctctgtctgcgtgtgtgcgtgtgtgtttaatttagagggtgaaaaaaaatacttcccgttatttttatcaagttcctaattataaatagatatattctaaaatggagagagtgtgatcaatcttctttgtaatgggcatatatattgcataccccatccgtccaagaaaaaactcaattctagctacgaatctggatatatgtgggtttgtctttttttttaagacagaagagtagtatatgtatgggacattgagatggaataagtatgggtgaacagggaatatttgcactgcaggcagttgcagcattgtgccagtctcttcagctactctagctgtttcagccacagtaacatttttccaaggaaaaaaagaaaagaaacttctgcctctgcaaagtggggcccacagaggagtgtccccacaagtaagggacagtagtcgtagaggaggtacatgtgatactggcacacagtgcgggcgggaaacgaaaagatgggagagaatatgcatgcaaaatgggggcggggccgggctaggtctgagcgggagcgcacgctgttaaagttagctgcacggcgagagatggctcatggtcatggctgtgcgtgcatgggcttcagcagctgcatctgcatctgcatctgcggctgcagcgagatcgattgatggagatgtcgttttagccaagtgcaatgtcgttgttatctagttcttcgtctcgtagtgatgggagaccggttaaataggtattggttttaaataaatcgacacctataagtcgatacctattaggtgttttgtactccctctgttttttaatagatgacgctgttgactttttctcacatgtttgactattcgtcttactaaaaaaaattacgtaattgtaatttattttgttatgagttattttatcactcatagtactttaagtgtgatttattaaaaaacggaggtagtagtagtgttctatgtctcaaaatttatagtatttgaatgtgtcacatccggtattagattgattttttataaaatagagtagttgttttatgtgtttcagagaccagtagaggattgactctctctctctctctgctcttctagctttctacatctcttgccctcttttttctaactaaaatgtaggttttacctcggtatccgtctgaatgtttttaaaattgctaaaccgtgtatttcgtgtgaacaatttttataaataagttgctttaaaatattagataaatcttttctttttttcaaaattgtaatgattaaaactcaattaaccgctaataattttctagttgttcatgccctagctctatatttatcttcttaaaaaaacaaacatatgtctctcttgatgaccataggatgttgtttcttgtgtgtgcaggctctgagctacccttacatgggcgacgccaacgggaccggtcctatgcaaaatgtaagttcgttgttgcatctctctctctctctctctctctctttctctcatatttacgcacgtagtataaggctatatatgagcacaaagaggaaaggagtatctatatacgagcgagaagatgccctacacacgtgcaggggtgccgtgcaacgcgaacttaggctagctttgccttggctttgtagatccatactatcataggtgaacaaaactctttatcaaaggcattctaaaaaaaaccctttcatcaaaggttaggctgagtaggatcatccttttggtgacctttggggccaaaggctttagatcttttataaatctttatactacgtgcatgacggcaagctctgttctgaaaacaaatatatataacctccatgaatttatgtgcgaatccagaaaatattttcatgtttgcaaatccatgcatagttgcacgtgtttttttttcatggaatggaagaaaaatttccttaaaaattggggcatttgattagatatatataagaaatagtaactcaaaaaatttaaaacaagtgagtatgtcctgatgatttatatgtttagaataatagatctgaataacctcccaaattaattaattttgtatatgccactgaataactacatgtcctttatacatgcatgaaactcctgccatcaatggcatattgttcagacaatgagggttactactgcatatatacaatatgtatagctatgatatatataatttttttaaagcttagcatgcttaaggcatcaaatcgactagaacatattagccgctaaaaaccaattaatataaatgcactcttgtagatgtataaattttgtgtttctaaagcaaagaaaagtttaacatgccaattttttctgtctgtaaatctatttttgtatagtataactatattataatttattttctgtgttaaatttttattctgcacataaaatgttcatatctatttgcgtaaaactatatcggttatatattatacatttttattacccgtggagaagggacataaaccagtagttttcaatttttttaaagcatggaataaattatcgatgaaaagtctacaatgttggatatcaagaaaattaagaccctacttaagagtttaaatttctcataaactgattgaaaaatattcaagaaaaattataccttgtgtccatatttattttcaaaaaaaaatttatagctactaaatccactttactatctcatatattaaattaatcataggtttatataaaaaagtattcctgtacaaaaaggtttcacgcaatatatcacctcgcaagatttcaacttaaaatataacttatataaggagaataaaaaaagaggaatgccatttgcaattaagtaaagtgtcttagttcagtagttcaagtgaagcagcaaaatagttcatcgtagtaaaattgacttctccattttaaaactttcaaacagcttagtacaagattaattgtgtcatcatcacatgagagaaaaaaaaaacccatgcaaagtacacagacatggataagatagatattaccaccataacgttcttagtttagttgacattggccatatgcatctgagacaaccatgggccagtacaactcatgggttcaatcattttaccacacccaaaaaaatattctcccctcagcttttttgcacgcttgtacgtgcaacgttgacatgtgacacagttactttccttttgattttatagggaccagttggagaaaggaaccctggcctcttcccggaataccctggccaggttagtgtagatctgtacatgcacatgattattaattcttatagatataagaatataatctatctatatagatattcctttccagctccaagccacttttttccttatatcttttttgtttgtgtgtggttccttgtgcagttgctaaaccataatggcaacactggagcacagcagcctgcagcccaacctgagcagcaggtatgtatgctctttgcttagcttcaaagccattttcacaatgatgtatatacatgagtactgtgtcgactagagtgcatggcatgttgttatatataagttttcaagggcaaaattaataccatactcatatgtttctttttccctttttttcactaaaagcacctacatatagttactatatatactgataatagttgcgaaaattaacatgcatgttactagctcctatatgtatttttttctgtataataatttcatggcatttgataattgttattagggagcaaacgacgatggaaagaaggacctgaggagccgggggctgtgcctcgttccagtgtcgtgcacgtcgcactttggaggggacaatgccgctgactactgggccccggcgccgctcggcgggatcctacggtagaatgcatcgttgagattcgtgcatacaaagcgtggcggcacagcgagtactatatgttgatgcatgaggaggctacagacgaaataggtctcttaagaatggagaacagagtgtgcattgggtgcaggagtaacgtcgtcataacatcatgagcagtcattctctggtaagaaaaaaaattacctgtaaggttgattgctcttgatgctatgggagtgagaggtagctagctatagtataattaattaagcttctggatctgcaaattaagaagcttcagttcaagaaggagaccttgcaaaagttgatgccccctttgatatgtatatgtaaaatctagcaagtcagtgaacactttgctcatactaccgtgctttgatttatcatcagaagcagaaaagcttgcgcggtagtgtcaatattccgtcagttgctcggctggtgtatgtaggaaattaaagttgatatcccatatcacatatatgtatattgacagttaatttgtatcagttatttactgagttaagtcagcaatattatttgtcttcgatgttgctgaattatttgtgtgcatctatatatggattttctgtatgtcaatcgacaggaaattagggg</dnaseqindica> 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| External Link(s) |
