Difference between revisions of "Os05g0247600"

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(Created page with "{{JaponicaGene| GeneName = Os05g0247600| Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein| Version = NM_001061554.2 GI:297604128 ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0247600|
 
GeneName = Os05g0247600|

Revision as of 20:06, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0247600

Description

RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein

Version

NM_001061554.2 GI:297604128 GeneID:4338210

Length

2559 bp

Definition

Oryza sativa Japonica Group Os05g0247600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:8962764..8965322

Sequence Coding Region

8962764..8962831,8963534..8963581,8963612..8964218,8964249..8964353,8964771..8964861
,8965228..8965322

Expression

GEO Profiles:Os05g0247600

Genome Context

<gbrowseImage1> name=NC_008398:8962764..8965322 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:8962764..8965322 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctatggccaggaatcagccacaggatgaagaaattgatttgcagaaacacaaaaatgtcatctccttctatgagaatcctttgcttcgaagccatctggctctagcctttgttgataaattggaggagctcagagacttgaccttggctgagtggaattttagactctttatgaaaagtaaggacttctataatctttgtgctcaattttgtgagggttctctggtgcttgagagtattaatagatcctttataactctagtccctaagaagtcttctccagaaaagagtgtggctctaaaacttcttactaaggtgctggctgataggctacaatctgtcatcattgaattgatccaccaaaaccaatatggtttcattaaggctagaaatattcaggactgtttggcttggtcttttgaatatctgcatcagtgccagcattctaagagggaaatagttcttttaaaattggattttgagaaagcttttgatactattgaacattcggttatattggacatcatgaggcagaaaggctttgatcctaaatggataagctggatttctcatattttttcttcagcctcttcttcagttatcctaaatggtgttcttggcaaatccttctattgcaaaaggggtgtaagacagggtgatccactttcacccttattatttgttcttggagctgacttgttacaatctatagtcaataaagcttgttctcagggagttcttacaatgccaatcccaacacctggtaatgaatttctgattgtccagtatgcagatgatactcttatttttttgactgcttcccaaaaagagcttttctgtctcaaggcaattttgaacacttttgcctcttcaactggccttaagattaactataatttggaaaaggttgatcatctctcaaaattgtttggttgctctattgagcaagcttttcaagaatatttagcaatgtcagctgcagataccttggagcatcttaatgataagtga</cdnaseq>

Protein Sequence

<aaseq>MSMARNQPQDEEIDLQKHKNVISFYENPLLRSHLALAFVDKLEE LRDLTLAEWNFRLFMKSKDFYNLCAQFCEGSLVLESINRSFITLVPKKSSPEKSVALK LLTKVLADRLQSVIIELIHQNQYGFIKARNIQDCLAWSFEYLHQCQHSKREIVLLKLD FEKAFDTIEHSVILDIMRQKGFDPKWISWISHIFSSASSSVILNGVLGKSFYCKRGVR QGDPLSPLLFVLGADLLQSIVNKACSQGVLTMPIPTPGNEFLIVQYADDTLIFLTASQ KELFCLKAILNTFASSTGLKINYNLEKVDHLSKLFGCSIEQAFQEYLAMSAADTLEHL NDK</aaseq>

Gene Sequence

<dnaseqindica>2492..2559#1742..1789#1105..1711#970..1074#462..552#1..95#atgtctatggccaggaatcagccacaggatgaagaaattgatttgcagaaacacaaaaatgtcatctccttctatgagaatcctttgcttcgaaggtaatccaatggtatgacaattttatccgctgctatgtcaatcctcaggttttcccataagtacaggagccaatatcctagatagcactaataagaatgggtcaaacaatataagcttttcatgagaaactaaagcaatagacaatgcattatggaattaccgcaatagctgttctttttctaagttagcagaaacaattcatcaaaaactcccaccttgttcgtgcgagagcaaattcataggctatgctcaataaataaacagaagcaaatacatatagaattggtaaacaaactgaaataaaatcgttgaaccataaactttagttacgtgaagtatactaaactttcatacttcgattctagccatctggctctagcctttgttgataaattggaggagctcagagacttgaccttggctgagtggaattttagactctttatgaaaagtaaggttcttttgctccttaagtttaaacaagtctattggcaaaaaaggtgcactataaggtgggcaaagtttggtggtgaaaatacaaaattctttcatgctgcggcaactgaaagatatcgcagaaatttaattatgcagctaaagtctgatgatggaagggtgctttctgatcatgcagaaaaggcagaaattatttttcaaacctttcagcaaaggatgggagtttcttcttctccagtcatgcacttcagtttggcagatctcatttctgctgctcctgatcttcagtcattgtctcttggctttacaaccatggaaattgatgaagttgtcaacaaaatgccaattgatagatctccaaggcctgatggattcaatggttgcttcattaaggcctgttggcctataattaaacaggacttctataatctttgtgctcaattttgtgagggttctctggtgcttgagagtattaatagatcctttataactctagtccctaagaagtcttctccagaaaaggtaaatgacttcaggccaatttctttacagagtgtggctctaaaacttcttactaaggtgctggctgataggctacaatctgtcatcattgaattgatccaccaaaaccaatatggtttcattaaggctagaaatattcaggactgtttggcttggtcttttgaatatctgcatcagtgccagcattctaagagggaaatagttcttttaaaattggattttgagaaagcttttgatactattgaacattcggttatattggacatcatgaggcagaaaggctttgatcctaaatggataagctggatttctcatattttttcttcagcctcttcttcagttatcctaaatggtgttcttggcaaatccttctattgcaaaaggggtgtaagacagggtgatccactttcacccttattatttgttcttggagctgacttgttacaatctatagtcaataaagcttgttctcagggagttcttacaatgccaatcccaacacctggtaatgaatttctgattgtccagtatgcagatgatactcttatttttttgactgcttcccaaaaagagcttttctgtctcaaggcaattttgaacacttttgcctcttcaactggccttaagattaactatagtaagtcatgcatgattcctctgaatgtagatttggaaaaggttgatcatctctcaaaattgtttggttgctctattggtaagtaaccttttacttatctgggtcttcctcttggaaccacaagaccaagagttattgattttgctcctctaattgatagagtagcgagaagactctcagcaaccactgctttgttatctcatggggacaaattgaccattgtgaatgaagttctttcctcccttcccacttactacatgtgctctctttcactttcaaagacagtcatagaaagtattgatagagctaggagacattgcccgtggaggggatctggtattaattctagtaagaagtctttggttctctgggaaagagtttgtcagccgaaagatagaggtggtttgggtgtaatagaccttagattgcaaaataatgcccttctcttgaagaatctgcataagttctataatagatatcctgttccctaggtcagtttgatttggaatacttactacactgcagaacctcctcatgctgttactcctaaaggatctttttggtggagggatgttttgcaatttgtggaaatttttagaggcatctcggcctgtactgtgcaagatggaaaatcttgtttgttttgggaagatttgtggaacaataaagtcagggcattggtttatcccagaatatattcttttgccaggaattcaaatctctcagttctgatgttctctacttctgatctaccttagctctttgccttgccactttcagagcaagcttttcaagaatatttagcaatgtcagctgcagataccttggagcatcttaatgataagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0247600, RefSeq:Os05g0247600