Difference between revisions of "Os05g0248300"

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(Created page with "{{JaponicaGene| GeneName = Os05g0248300| Description = Conserved hypothetical protein| Version = NM_001061558.2 GI:297604131 GeneID:4338214| Length = 6948 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0248300|
 
GeneName = Os05g0248300|

Revision as of 20:06, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0248300

Description

Conserved hypothetical protein

Version

NM_001061558.2 GI:297604131 GeneID:4338214

Length

6948 bp

Definition

Oryza sativa Japonica Group Os05g0248300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:8995185..9002132

Sequence Coding Region

8995185..8995284,8997424..8997510,8997998..8998182,8998242..8998388,8998465..8998545
,8998632..8998682,8998771..8998920,8999001..8999063,8999152..8999238
,8999332..8999386,9001912..9001989,9002071..9002132

Expression

GEO Profiles:Os05g0248300

Genome Context

<gbrowseImage1> name=NC_008398:8995185..9002132 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:8995185..9002132 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacagcgatgagaaggaaaaaaaaagagagaacaaggagactatcaccaaaaaaatggagatcaagaggatcaagcaaacaagagaaaacataccagggttaaagaatgagacacaaaaagacaaagacatcaataaacaaggaaaaatacaggcacagattcaagtaatgaaagaaattgctggtacaaggaagcgtgaaagtgaagaagggggaataaatgcaggggagacaatgagaagaaaatttcaaaaaactgggcttgaagaaatcaaaagagacatacaaatatcaggttatattattgagaaggaaaattttaacagaaaaaaaaatgacttacagtcaaaacttgcaaaacttacaactgatcaaatcaattgcaggagattgacaaaaaagaatattcaatcaggacaaaatgctagaggaggaacagaaacaccaaatgcaacaagctatggagcacaaatactatacaaccagtactcattgcttaatgaagatggaagacttatggaggcaggaaagatgagctacactaatctcatgcaacaaataattcagagtccaagagtgaccatgcaaacaaatgaggaaggaatagaggcatatacaaatctacttcaaacacccgtcgcatttgataattctatgattttgacaacaagcaggttttctccacaagaaacagatcagcaagatgggttttatcaacaacagatttctacaacagaacgcatctatcaagaatttgatgcaatatacaataacaacaacatgactacatggagtgagagatcatcagaaagagatataaaagagttgtatgaatccaaaaacaaccatttcaaaagacaggtgaatgggacgacaatggcaatgcagagtaatgagcatccaaacgaagaggatatacaacaaaattcaagaaatgagaatggacagataaacagtggacaagtgaatgaagaaataacagaagttagaaatgacacagaagggactattgagaagcaaaggaagcctggaacaagaaagaaacagggagaagatcaaactggagaatcgtcaagcaaaagaaagaggtcagctagtcaagacaatgaaagaaaaacaattgagaagaggacaagaagatga</cdnaseq>

Protein Sequence

<aaseq>MDSDEKEKKRENKETITKKMEIKRIKQTRENIPGLKNETQKDKD INKQGKIQAQIQVMKEIAGTRKRESEEGGINAGETMRRKFQKTGLEEIKRDIQISGYI IEKENFNRKKNDLQSKLAKLTTDQINCRRLTKKNIQSGQNARGGTETPNATSYGAQIL YNQYSLLNEDGRLMEAGKMSYTNLMQQIIQSPRVTMQTNEEGIEAYTNLLQTPVAFDN SMILTTSRFSPQETDQQDGFYQQQISTTERIYQEFDAIYNNNNMTTWSERSSERDIKE LYESKNNHFKRQVNGTTMAMQSNEHPNEEDIQQNSRNENGQINSGQVNEEITEVRNDT EGTIEKQRKPGTRKKQGEDQTGESSSKRKRSASQDNERKTIEKRTRR</aaseq>

Gene Sequence

<dnaseqindica>1..100#2240..2326#2814..2998#3058..3204#3281..3361#3448..3498#3587..3736#3817..3879#3968..4054#4148..4202#6728..6805#6887..6948#atggacagcgatgagaaggaaaaaaaaagagagaacaaggagactatcaccaaaaaaatggagatcaagaggatcaagcaaacaagagaaaacataccaggtaaatttcaaccctgaaaccccttcccccttcacctttgcatttctgattttaaacctctaaaactttcaccacatcttctgccatcagttgaccaactagaacagatctatctaatgctcatacagttgaacaattgaacagataccaattctcatgcaggatattaacttgacaactcaaaacttccactagataacaactaaaattacatatggaactatggtccaattccactgtaactgcactgtaactgtcaatgaattgtactgtaactgaaactataagactacttacagttatattttgctagcaccatacatggccccaacccgtatgcaaaaaattacagtgcatttgcactaaaattacatttgtaagaacaatagatataacatgtaagtgcactgtaagtttagtacaaatgcactgtaaatttaccaaaaagtaaaataaccttagtatgcccattccaaattgtgctaagagggaatcactaaaactgaacacatcaactcagttttgaatcactaatagtatatcatgccatgtagctaggtgcacaaaccactgtaaatcactaatagtatatcaattggtcagaaaaaaaagaaaaagaaaaccacactagttattagcatggtgatatgggtcagagacaactaacctgcatgatggctaatagacaggatagttgagatcccttgagtaagaagcaagctaaaattaaagagaacaaaagcatgaattaggacatattccacggtaaaactgagtcacataacaattggagtagggcacaatccatatgaaaaaaactcaatccatatctacaaacatgccaggcaaaaaaaaacatgaacacctattttaggcacaaatcaactgaaatcaacacacaaataatactccaatactaagattgcacaagggattaaaaatgaaaaagaagttcagaaactaaaaacaacaccgcaccaaatcaaattcacattcacatatggtcaaattggaaaattacagtgctttgtaccttaaattacatttgtaaaaacaatatatacggcatgtaagtgcactgtaagtttagtacaattgcattgtaaaatttgataacttcaatatgttaacttcaaaatttcataaattctccatcaaacagtaatgcatatacagattttacatcaaacatgataggaacacatgtaatgctcaaaaacaaacaatcaagatttacttaaggtaataaacacatttatattaacactaataatataaaaacttttgccatcaaatattaaagaaaaacacctcaaaactttgcacatcatcagacaagaagtttaataaatctttttcacaaatagtgaataattttcttgtctgatgacgtgcaaaaatttgatttgcttaattcaaaaattatttatcatcatttggcaaaaagagttgattgcataaagaacactagattatgaaaatttggtgcatgtcctatgtaaataaatatctaatacttaacaatctagtaagatgattttaaaaaacatgtatactaatttggtgcatattccttgaatgttgcaggaacaaaatttgctgaaccagttcaggttggctgcatggacaaaatagttacataaatactatactatgctagacaaaaagattcatcacatcaggtcatattaaaaatagcactattcagaagttaaagtttaaaagaaaaaaacaacttacagtcaaaacttgctacaacttacagtcaaaacttgctacaacttacagtcaaaacttgctaaaattacaactgtaactgtagttcatgaagaatgtattggactgtaactatagtgcaataaatatggaactagaacagatatatctaaatacgccccaattctcgtagaggaaacttcacaaaaccaaaaattacagtagataacacctaaaattacatatgtaactatggcctaattccactttaactgcactgtaagtggtatacaattgtactgtaagaccactgtaaatgtgataattgatgaagaatatacagggattgtatggaatatagaattcagtaaggacaacacattacatgtttctactgtaactacattgccttaatttttgcagggttaaagaatgagacacaaaaagacaaagacatcaataaacaaggaaaaatacaggcacagattcaagtaatgaaagaaattgctggtaagtaatttatggtcaacaaaattttaaattacaaagatattatattgtaatgctttttaaatattaatgcaggattaaagccagatggagaatgtagtcagaaaaaaattctttcagaaacaagttgatacagaaatcaccaatttcaagcaacatacaggtaacaattaaattctacgaagaatagaataaaatttattttgaaaaacactgcttgcagctataaaaaatgactagggcagcaatcaaactaaggggcacataaaagtccgaacttacaaaaacatcaaacaaatttaattctccaggcatgccccaacaaatgaatgatgacaggatgaaaatatctaaaaaaactaacattctattataaattacaatacaaaagtactaaaattacgactgtaattaatcagtacttgaactgtaactgactgtaagtggtataaaatataactgtaactgattgtatttttttttgcaggtacaaggaagcgtgaaagtgaagaagggggaataaatgcaggggagacaatgagaagaaaatttcaaaaaactgggcttgaagaaatcaaaagagacatacaaatatcaggttatattattgagaaggaaaattttaacagaaaaaaaaatgacttacagtcaaaacttgcaaaacttacaactgtaactatagttgttgtgtactgtaaccttatgatgcttatttatttattcaattacaggatcaaatcaattgcaggagattgacaaaaaagaatattcaatcaggacaaaatgctagaggaggaacagaaacaccaaatgcaacaagctatggagcacaaatactatacaaccagtactcattgcttaatgaagatggaagacttgtaagtacaaaattcacaatattataaaaataatgccaatacttctgatataacagaaaacaagggaaatttacagatggaggcaggaaagatgagctacactaatctcatgcaacaaataattcagagtccaagagtgaccatgcaaacaaatgaggtaagcatattttaatcagatttcaattgtactagaaaaagaaaaatgaaagaaaaactaattgcaatctaaaatgaaatgtgcaggaaggaatagaggcatatacaaatctacttcaaacacccgtcgcatttgatgtgagaacttaacttacaaccataaatgaagaacaaaaatgtcaaaatttataagtcattactaacagtttatattttgccattgcagaattctatgattttgacaacaagcaggttttctccacaagaaacagatcagcaagatgggttttatcaacaacagatttctacaacagaacgcatctatcaagaatttgatgcaatatacaataacaacaacatgactacatggagtgaggtaacattttgaacagtgaaataaatacactaaccggattattacttacaaatgacaaacaatttaaaaaaattatgcagagatcatcagaaagagatataaaagagttgtatgaatccaaaaacaaccatttcaaaagacaggtacgttacttttgacaaacattcataaaataaaatcataaaaacatgtgatagtataattgaaacataacaaataagaaatttgcaggtgaatgggacgacaatggcaatgcagagtaatgagcatccaaacgaagaggatatacaacaaaattcaagaaatgagaatggacaggtaaacaagagtgattcatatattgacattgagattacaaaatagattagtttactaaaatttcatactaatcaattcatatatttttttcagataaacagtggacaagtgaatgaagaaataacagaagttagaaatgacacagaaggtgcacaaaaagtccaaaataactgtgaacaaagtactataacagctagtaatgaagtaagcagttcaagaagccacacaactggaggggacataaatgaggaagacataaacaatttcttggataatgaataggaaatcaatgaagtaattgacaaaaggcacatacctgaagttggaatggagttcagatcagataaggaggctcatggattcttcaacttttatgcatacctagttgggttctcaattgtaaatacacaccattacaagacaacaagcaagaaaatgaatggtgagattactagttatacatatcagtgctacagatatgggaaaaatgaggaagatgggaagaaaaagaagaaaacaacagaacaaaggaatacaaatgtgataaacagaactgactacaagtgtgtgatggtaataaaagaggaatacaaatgtgataaatagaaaactgactacaagtgtgtgatggtaataaaagaggaatacaaatgtgataaacagaactgactacaagtgtgtgatggtaataaaagaggtacagaatatttggaaaatatcaagactgaacctagaacacaatcacacactaagcccaaacagagaagcaaaattcctaaagtcacacaagaatatgacagtaga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External Link(s)

NCBI Gene:Os05g0248300, RefSeq:Os05g0248300