Difference between revisions of "Os05g0261700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0261700| Description = Leucine-rich repeat, plant specific containing protein| Version = NM_001061576.1 GI:115462882 GeneID:4338239| Length...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0261700|
 
GeneName = Os05g0261700|

Revision as of 20:07, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0261700

Description

Leucine-rich repeat, plant specific containing protein

Version

NM_001061576.1 GI:115462882 GeneID:4338239

Length

10997 bp

Definition

Oryza sativa Japonica Group Os05g0261700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:10125870..10136866

Sequence Coding Region

10125870..10126163,10126252..10126316,10126406..10126450,10126521..10126586,10126682..10126747
,10126840..10126911,10127016..10127090,10127168..10127239,10127327..10127398
,10127689..10127760,10127837..10127908,10128020..10128091,10128979..10129050
,10129131..10129202,10134541..10134612,10135069..10135268

Expression

GEO Profiles:Os05g0261700

Genome Context

<gbrowseImage1> name=NC_008398:10125870..10136866 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:10125870..10136866 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>attaaccatgcagcggctgctctgaacacgatactagggagatggggcaagaaggcatcaccggagtggaacatcagcggtgagctctgcagcggtttcgcagctgataaaaccgattgggataactaccgcgacatcaacccgttcatcaagtgcgattgcacattcaacaacaacaccctctgccacattacgagactgagggtaacttatttggatgtagttggtcaaatacctgcggagctacagaatctcacccatctagtggacctgaacttattccgtaattacttgactggtcccattccgtcgttcatcggaaaatttacttcaatgcaatacttgtcattatctttcaatccactatctggactacttccaaaggaactaggaaacctcaccaatcttctttcattgggcattagctcagacaattttacaggaagtcttccagaagaactgggtaacttgaccaaacttcagcaattgtactttgatagttctggattcagtggtccgttcccttcatcgttctcaaaacttcagaacctgaagttcttgagtgcatcagataatgtattcaaagggaaaatacctgcttatttgggcacaatgactaatttggaagacattgctttccacggaaactcctttgaaggaccagtcccagaaagtctgtctaatctgaccaaattaacaagattatggattggagatattataaatggggtctctccgttggcatttatcagtaatatggcatccctgagcacactaatattgaggaactgcaagatatctagtgatctcggagcagtagaattttccatgtttaaacagttaaaattgctggacttgagttttaacaatatcacaggagaagttcctcaatccatcttgaatttgggaaatctcaattctttgtttcttgggaacaatagccttacaggaaagttgccggatggtataagctcttcattaaaagtgatagatttttcgtacaaccaactcactgggagcattccttcttgggctagacaaaacaatttacagttgaatttggtggcaaacaacttcttactcgataccaccagtgaaagtacgctaccttggggaataaactgcctccaacaagacaccccttgtttccgtggatctccagaatattattccttcgcagttgactgtggcagtaatgcatccataagaggctcagatgacactatttatgaagcagatcctacaaatcttggagctgcaacatattatgttaccggtcaaacaagatggggtgtcagtagtgtagggaacgccatagatgcaaagaatattatatatagctcccaaccttttcaaaatgtagttgattcagagttgtttgaaactgcaaggatgtcatcatcatctctgaggtactatggacttggacttgagaatggaaattacactgttttgctcc</cdnaseq>

Protein Sequence

<aaseq>INHAAAALNTILGRWGKKASPEWNISGELCSGFAADKTDWDNYR DINPFIKCDCTFNNNTLCHITRLRVTYLDVVGQIPAELQNLTHLVDLNLFRNYLTGPI PSFIGKFTSMQYLSLSFNPLSGLLPKELGNLTNLLSLGISSDNFTGSLPEELGNLTKL QQLYFDSSGFSGPFPSSFSKLQNLKFLSASDNVFKGKIPAYLGTMTNLEDIAFHGNSF EGPVPESLSNLTKLTRLWIGDIINGVSPLAFISNMASLSTLILRNCKISSDLGAVEFS MFKQLKLLDLSFNNITGEVPQSILNLGNLNSLFLGNNSLTGKLPDGISSSLKVIDFSY NQLTGSIPSWARQNNLQLNLVANNFLLDTTSESTLPWGINCLQQDTPCFRGSPEYYSF AVDCGSNASIRGSDDTIYEADPTNLGAATYYVTGQTRWGVSSVGNAIDAKNIIYSSQP FQNVVDSELFETARMSSSSLRYYGLGLENGNYTVLL</aaseq>

Gene Sequence

<dnaseqindica>10704..10997#10551..10615#10417..10461#10281..10346#10120..10185#9956..10027#9777..9851#9628..9699#9469..9540#9107..9178#8959..9030#8776..8847#7817..7888#7665..7736#2255..2326#1599..1798#gtcgtctcagacacagaggcactccatcaccaccgccctcggccgcctcgacctcgccgcgcagccgcgtttggatgtccggccgccgcactaggttcgccgtcggagagcttccgccgccgccgcccgccgccttctggaaggtggagaagacgcgggcgcgggggaggaagcggagggaactcctgctgcacggcgcgcatggcgccgacgagctcgccgtccacgccgtcgccgaaccacgtggccaagttgagcgcgaacagtgcggcgtacaggcagcacgacgagcagagcggcgccaagaaggcggcgtgggtggtgtcgcccaacggccaagtgaagcgagaaaaggcggtggaagcggcgcgcggcgagggagctgcagccggagccggagaagaagaagaaaagcggatcgacttggccgtgctccgttgccctatctgcctccttcctagctgttcatccaatccatctgacattcttcttcttgttgttgttctttcattcgattcgtgagggctcggctagtggcaatttcttggcgtgcagtccgcggcggggcacttggcgtgcagcagctgccatggcgacgtcccggcaagcagtgccacgcgtgcggcggcgccgccaagatcctgtgccccaacgacctgttcggctgctggagctacgtcgcctattacgacgtcgccggccaccagcgcgcctgcccgcacgcgccctgctcctgctcggagtcgcgctgcgacttcctcggctcgccgccgatgctcctcgcccacctcgtcgccgacatgtggttggtgtcgatttggaatggggtgaaatggactggaaaagtgaactgaatccatatagatgaaatgggttgggttgatttgggttgaaatatgatatgggttggattggtttggattctaagagaagacaaatgaattagagtggtttggacttgtgtagcttactgctttggtttgggctggttgtggattggatttcaaaccattggcaggcttccacgcatgcatgtctctcttgtttggtttccctccatgtactttgatcgcaggagtactaatttgtggttgataataactttgatagtgtgtccgctcttgccgcgttgaaaccaaagagttagagaaatcctatatatttatataaagttcatttctacagtggttattaatgctatttatatcttttcttattaagccacatcatctaaattgtttctttatccctatgatagttgagataggtatattgttcaaattatctctcacgttttcttttgttattaagccgtatcacctttgttttatatttaagatgatgtacttagccacatcactattgttgtgattttaaatggccaatctagtttaaattattataaataacatcctaattgtatatagttttttttctgcagtcgataaagatgaaattatataatgttatgcctactgattatatgttatttctattattactgtataaaacttacgcagcaacccgtgagtttcatgaagtctgatttcactattgcgtagctttcatccgcatgattactaatggtgagttaataaattaaccatgcagcggctgctctgaacacgatactagggagatggggcaagaaggcatcaccggagtggaacatcagcggtgagctctgcagcggtttcgcagctgataaaaccgattgggataactaccgcgacatcaacccgttcatcaagtgcgattgcacattcaacaacaacaccctctgccacattacgagactgtacgcacactctctttatctttatcgtggtttcatcgtgtgtgctagcccatatacacgtatatgcaagtatgcaaattaagatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatagacacacacacacatacatacatatatatgtgtatatatatatagacacacaccagattattgatattaattagtatctccaaggctgcatatagaggaatcagaaaagtctatcctaaatttggtacagatcttccctaaagaaaaattgtacatatctgctggacccaaacggaggtattcatttggtcctccggctgtatatatgtatcctgaacatagttctcttatcagaattattacttgtttgttatgtaggagggtaacttatttggatgtagttggtcaaatacctgcggagctacagaatctcacccatctagtggacctgtacggtatcgaagacttctcttcttaatttatcttgctacctgtcacattcggaaattcactagtaatttccgaactaagttgtgcatataatacactcatctactaattagctgagatactaaaattgacaattgaatatacagatccaatattataattacgttagatattacttataaatgaaaagaaaacaacaggtaacaaacaatctaacattagcttcagctccactctcacagacagttcaactgaggtataagccacatgtcttctccttcgaaaactttcttcaactgagatttgatgattattgcaaggtgagtaaatagaatactccgtaagccacatagaaaaaatgcaggtgcatggggatacaaaggaaggtatagtagggttcatttgcaaaagcaacattcagtaaatagttgagagtaattaatcaatttaaaatcaactctgaatagcatacctatgctgcgtaggcccaaccatctctaaacaaccaaacccgactacacagatctaaagtccatacaaaatgcaaacaaattgttatgaccaatttatttatgattaatgagtagtgtgtgactaatcaccaaaaaaacattgctaggcttgccaataaccgcatgtatggctatttgaaaagttttactctagtcagatgtgtaccaatatacccacaagacaattccacaacatgtcaccatgttatcgtgtgcccacgcttaatatgtcaccacgtgcaaaattgtgactcttcgcatagctcaactcaaagtagttcaccgttcccggatcatcgtctttccatagcccggaatagactccgcagtgacccacatgggcctatctctaccacttcttagtgtggtgctccatgatgaatcatgctatacaaaaccggtccttaattgtgatgagcatgatcatcacatccatgtgctcaaaacctaccattagtcaagttttagttagcatattattaatcaaccatgaccaaacatcacaacataccattaattaaccatcattaatcatgagtgaatcattagttattgcatgtaaaatgatactaatgtttcttagcatggctaagcaattacactaatatctagtcgaaccaatatatatggctcaagctagtcaaattatatcccaagatatcaaggaacaggattatcaatacaaactagctattcaaaggaaaggttcccaccacctaatgacattcgaaattaaatgcacatttaaaataaaagaagaatttaaatattttatcaacatgctcaaagggattgtttgggacatgtgtgacatgccttacaataatcaattaaacaatatataaaaaggatggaaactacaagctaacatgcaaaacgagaaaaaagactaataaaaaccaaataaacaatacataaaaagtaaacaaacatttagagctttattttagatgaattatgaactgcctcatttcgacttcatatgaattagtaatgaattttacaagatttaattcaactaaagcctatttaaaaggattaaatagatttattacataatttataattattttaaagaagaaaaagataaattatgatgtcatcagcaatcagtccaccgtagagtaggtccacagagattgaccacatgttcactgagatggacaaccgagattgatcttgaccaagagttaaccaagagttaaccaagatctgacggctcaaaccgattcaatctagggtttagatggaaccacgtggcaacatgttgacgtgaaatttgtcgcacacgaaggcctgagagatccacatagctcgtcgtatcaatcgggtgtagggcgtggcggttagtttgatcgtacaattaagaagatagatagatggattgtataagatcaaagagccgatcagccaataggctgatgtgatgtagcaaggctagccgatgtatataaggttttcatcaatcgtcaataaaccattcctaatcaaagataatcttgatagatcagacctaattaatcgagacggtatgatattgaagttgataaagagatatttaactattgattatacaagtttgagtataagacgatacaacacttagaagtagtaacaagataactaattggctagaactctaataaaatgttgcataaaaacttatcggcttagtagaatataattacatattagcaacaatctaataaatcaaacctaaacgagacagtataagattgaagatgataaaaaatgggataattgcttatttgaccctgttttgaagcctaacttctaatctgactatgtttttcttagtttgcttatttgacttttttaaattgaacactccgtctgaccctctttccactacatcattagggtttcttctagaaaaagaaaaaaaatctatttactatttaaactgaccaaaataccatcaaggcacttcaaccctatccatcccaccttgtctctctcatctcttacaagcggcacatggagaaatggatctgcggtggcggcggtgcgtcgagggagtggctagcagcaccgccgatgcgtggaggtagggagcagcagcgtcggcagcgcatggggaagcggcggctgccgcacggatagggaggtcggcgcaaacgccattgcgcgacggagcggccgcggcatcacgcgatgcgtgtaggtatctcggaattcccgtgtcgcatcagcggccgaccgcggcagaagtggaggaggatggagcgtttcgttgacgacctactcaggtctctcaagaagaacgccacggtgggtgcgccgacgaccatggtgaacgtgttccggattattatcgagatattgatctggctactacttggataaccttgatgagatattgattatcagagcacttgattaatttgctgcgcctagacgtttctctacaagtgaagggggcatgcaagagtataagaattccctcgcgagttcattcgatgggccgtttaattcgcttgtggaggcatcggtttgtccgcagcggcgctgtcgcggggagcagtggcgtgcaaagggtggtcggcggcggcacccagcatcaacctccagctactgtgtattaaatttgtcaaattgattctgatttgttaaaagatccatttgtatgaatgtttggatacaagagggccaaataagcaagggcaaaagggactatttgcctcttatttaacagtgttaacccgccttaacggaacagggtcagacggttcatttgattttgatgaacagggtcaaataagcaaactgaaaattgtagggtcaaattagtagttatgcttttaaacatggtcaaataagcaattgcccctaaaaaacctatttatccgataaatctacacagacgtgatggatataacaaatctatctaaaacaatagtataattagagaaatatcaactaaatcagaatatcggacctaaccaagaaagtcctaactaagtcgatgcaactctaaacggcaatgcagttaaagatagaatcaatatatcggatatgtaatgcttgcgtcaacccaaaaagaatacctgacttaatcgagaaagttcttgccacggcgatacatgaaaagttgatagaaattacttcctcattggagatcaaaaccaatgcagcccaactcaaagtaagaacttgctagaacaaaaggttgcaatgcgccgaaagtaattgtattaatatgtggagaaagtttacaaagaccctgtggtacatatttatctcctcaggttgatgcaagtcctaatcagacaagacataggtttgctaaacataaaaggaaaaaatacaagtcttaatcagacattagataaaacttcctaaagattaaaggaaagttactaaatcaacagatagaattaatatgccatgccatggtcttcacaatcctttttgaattcggtatcttctggatagacttccattggttgatcaaatttgtccttcaaccaaatccactaaggaaccttaccaacttttggtgataacacaatagcaatggcgtggtgatgatgtcacctcaccggcgacgacctgctcggaacccaaagatcgccggcgaatcaggcacggcagcatgaacggagggtaccgagaggttgagtgtgacgagccgaactcatcgagaggcgttgcgacgacggacggtgaaggcgacgaggtggaaatgacggtgtagctcgggtcatcgtcaatagcggtgttctggcagtatagggtgatggaggaccggcagatgaaatgcgcctcctccttgcgcacccggcgaaggtgacagtgggcgaaggcgacaagtagagcggcgacgagtagagcaacgacgtgatccgactggaaggtggcagcagtgctgatgctatgggctagcggcgaagctagggctacaggctccgatttgtgcaggcgagggtggcagcggaaagaggagagggagggggatcctgtttgtagccacgagataatgtatccgggcctaagacggctatggcagcgctgggaaaaactagggttctaccggatagagagtgtccgagttcgagctcgattccacacgatttacttagatatttttggggatttcatggggaaaggaaagaggagatagggaacaaacggcctcaactaattttggaaaagatctagagaggcggctggatttggagaggaacgcagacagtgtgattctggctggatgctggggacaacactaacatgtgggaccagatcccacatgttggcaggagtgagaggagggaggcggtgggctggtgacttaggctagcggcctagcgctagctgcgctgagcgcggagagagagacatgggctcaattcgacccagaactttggaggggtttctaatttattttatatttaaataaccattgaattgatgtttgtattgttaaaattagtaattgagctctgaaaaatccgaaaaaattctagagagtgtaaactaatcatggagaatataataaaaattaaatccagcaatgttttatttaggaaactttatttcccactttaattcattttcttaattaatgtacactttaatataaattctagaagtattttattaaataatttataaattcctgaaacaaaatcagggtgtggcactactaaagagtcttgtactaataatttatagatcaagggtttgcacaaaatataaattcaatcccatggttctttctgtgaacaccaacaaatgcttgtcaggtattcatcattatttttgtgttggctaattgttctagtttatttttgtgatcttttcaggaacttattccgtaattacttgactggtcccattccgtcgttcatcggaaaatttacttcaatgcaatacttgtatgagttacatgtttgttctagatcatgttccatctattggtcgttgtttttttttaattattgctaatcatctcaaggtcattatctttcaatccactatctggactacttccaaaggaactaggaaacctcaccaatcttctttcattgtaagaaatcttttctcacatgtggattaatcttccactgctccctctgctacaaaccactcatcctttcagctttaactgtcaattcctagcagttttcacgcgcgtgcgcgcacatatatatagagagagagttgaacttatgactacgaatctgagcatagcttatgtgtaaattgttagctagaagttgtatttttttttacggagggagtacgaactataaattatgaaattatttctcatgttgaatctaaatgttaaactatataaatatgtaaaaatggatggttagaaatataatgtttgacttacaacaaaagtagaatgacagataatatgaaatgagtggagtatatatttggactgcacgaactaatataataatacatgaaatagcaatcgcataagttctacttcccccgtcccataataagtgcagttgtgggttttagtgctcaacatttgaccgtccgttttatttgaaatatttttataaatagtattctaattgttattagatgataaaatatgaatagtagtttatgcatgacttatttttttaaaaacaatcataattttttcaaataagacgaacggtcaaacgtttgatacagaaacacttatggttgcacttataatgggacggagggagtgataaaaaagatcaaaactactactaaataggatgtaataggcatgtcagtgtaactcctgctcatgtggtgcttcatatgatcaagtaagattgaacagcaaatacttgaacatattgtaatgatgaatattgtgggtccaatggcacatcaggaaaactatgccccttttgctattagttgatgacaaaaattttttgtcagtcctgaaatatttcatttttcatttaggggcattagctcagacaattttacaggaagtcttccagaagaactgggtaacttgaccaaacttcagcaattgtaagataccccattgatttctaacttcttatttctacttgtaaaagaactaaatttggaatggtcatatctattgtcaaacatgataatatttcaaactttcaataacaggtactttgatagttctggattcagtggtccgttcccttcatcgttctcaaaacttcagaacctgaagttcttgtatagtcaaaaacatagcctcaattattatattcgtcatgttttcatgctaaatgatattttggtctgcttgcaggagtgcatcagataatgtattcaaagggaaaatacctgcttatttgggcacaatgactaatttggaagacatgtaagcttgttaagatatcattcgttcttactgttcagagatagatgaatctgtgcaagataaattactgtctgtatatcacattatctccattcagacttaaacaaaagcattttttcacatttcagtcctcactcaatataaatgcagatatctgcatcacagtaagcggtccacatggcatgttcatacctagagatcttattaagaatgctcacacagagattttttttcttactttataaaggttgaatgtccctaactttttttctaaaataatgagcttgtagtgctttccacggaaactcctttgaaggaccagtcccagaaagtctgtctaatctgaccaaattaacaagattgtaagtatactctttttgtggcatgaactcttgaaggttgacaatgtcaaggctgataactaatttatgaaaaactcaaatgagcagatggattggagatattataaatggggtctctccgttggcatttatcagtaatatggcatccctgagcacactgtatgtgatgcttttagctataaagcttacagtattgtctagttgcaagttaccaaggttgtatttcctcgttacagaatattgaggaactgcaagatatctagtgatctcggagcagtagaattttccatgtttaaacagttaaaattgctgtaagttttcaattacaggccatggtgccaactgatgacgttattactcatttcctcatgttgtgtaccatatgttcaagtaatatgatagtcatgtggcacagggacttgagttttaacaatatcacaggagaagttcctcaatccatcttgaatttgggaaatctcaattctttgtaagaaattctttctttacatcaatttgttcatacgagcctgtattaagcagatgagtatattttataatcttgaactgtgcccaattcaggtttcttgggaacaatagccttacaggaaagttgccggatggtataagctcttcattaaaagtgatgtatgtcaaatacaattgacatggcagtatagcacaaactacattcataatagtacgcactaattttgtataacataattctggaatgttgacagagatttttcgtacaaccaactcactgggagcattccttcttgggctagacaaaacaatttacagttgtaagtgtaaaagtgtgatatttgtgtcgctgagaaaaaatataaatactaatattctgttttttgaaaggaatttggtggcaaacaacttcttactcgataccaccagtgaaaggtacttgtgacatttagttctaatttggcgagtgaactatatgaaaatcttgctggtaactttaaattttcaattcaaattgtgcacagtacgctaccttggggaataaactgcctccaacaagacaccccttgtttccgtggatctccagaatgtatatttctcattcttcataaaactaaacagtaacatgaacttacgaatttgaatgatggctacaatttttttaatcttaattgcagattattccttcgcagttgactgtggcagtaatgcatccataagaggctcagatgacactatttatgaagcagatcctacaaatcttggagctgcaacatattatgttaccggtcaaacaagatggggtgtcagtagtgtagggaacgccatagatgcaaagaatattatatatagctcccaaccttttcaaaatgtagttgattcagagttgtttgaaactgcaaggatgtcatcatcatctctgaggtactatggacttggacttgagaatggaaattacactgttttgctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0261700, RefSeq:Os05g0261700