Difference between revisions of "Os05g0350500"

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(Created page with "{{JaponicaGene| GeneName = Os05g0350500| Description = Proliferation-associated protein 1 family protein| Version = NM_001061809.1 GI:115463348 GeneID:4338500| Length = 35...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0350500|
 
GeneName = Os05g0350500|

Revision as of 20:08, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0350500

Description

Proliferation-associated protein 1 family protein

Version

NM_001061809.1 GI:115463348 GeneID:4338500

Length

3529 bp

Definition

Oryza sativa Japonica Group Os05g0350500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16530039..16533567

Sequence Coding Region

16530297..16530393,16531360..16531444,16531556..16531705,16531782..16531935,16532192..16532407
,16532489..16532625,16532701..16532792,16533006..16533188,16533295..16533362

Expression

GEO Profiles:Os05g0350500

Genome Context

<gbrowseImage1> name=NC_008398:16530039..16533567 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:16530039..16533567 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcggacgatgaggtcagagaggagaaggagctcgacctctcctcctccgacgtcgtcaccaagtacaaggacgccgccgatatcatcaacaatgctcttaagttggtagtgtctttgtgcaagccgaaagccaagattgttgacatctgtgagaagggcgattcttacataagagagcaaactggcaacatctacaagaatgtgaagaggaagattgaaagaggtgttgcttttccaacatgtgtatctgtgaacaacacagtctgccatttctctccgctagccactgatgaggcagtcctggaggaaaatgatatggtcaaaattgatatgggatgtcatattgatggttttattgccgtggtggctcatacacatgttatccatgatggagcagtcactgggaaagcagcagatgttcttgctgctgccaacacagcggcagaagttgctctgaggcttgttagacctgggaagaagaacaaggatgtcaccgaagcgattcagaaagttgctgctgcttatgactgcaaaattgtggaaggagttctcagccatcagctgaaacagtttgtcattgacggtaacaaagttgtacttagtgtgtccaatgctgatacgaaggtggatgatgctgaatttgaggaaaatgaagtgtatgcaattgatattgtcaccagcactggagaagggaagcccaagttattggatgagaagcagaccaccatctacaagagagctgtagacaagaattatcacttgaagatgaaagcatctaggttcattttcagtgagataagccagaagtttcctatcatgcccttcactgctagggcattggaagagaagcgtgcacgcttaggtttggtggaatgcatgaatcatgaattattgcagccgtaccctgtccttcacgagaagccaggcgaccttgttgcacacatcaagtttactgtgcttctgctgccatctggttcacagagggtaacatcgcattcacttcaggagttgcagcccactaaatccattgaagacaacgctgagatcaaggcatggcttgctttggggacaaaaacaaagaagaaaagtggtgcaaaaaagaagaaaggtaagaaaggagatgcagcagaagcagtgcctatggaggagggttcaaatgatgcaaacaaagaataa</cdnaseq>

Protein Sequence

<aaseq>MSSDDEVREEKELDLSSSDVVTKYKDAADIINNALKLVVSLCKP KAKIVDICEKGDSYIREQTGNIYKNVKRKIERGVAFPTCVSVNNTVCHFSPLATDEAV LEENDMVKIDMGCHIDGFIAVVAHTHVIHDGAVTGKAADVLAAANTAAEVALRLVRPG KKNKDVTEAIQKVAAAYDCKIVEGVLSHQLKQFVIDGNKVVLSVSNADTKVDDAEFEE NEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIMP FTARALEEKRARLGLVECMNHELLQPYPVLHEKPGDLVAHIKFTVLLLPSGSQRVTSH SLQELQPTKSIEDNAEIKAWLALGTKTKKKSGAKKKKGKKGDAAEAVPMEEGSNDANK E</aaseq>

Gene Sequence

<dnaseqindica>259..355#1322..1406#1518..1667#1744..1897#2154..2369#2451..2587#2663..2754#2968..3150#3257..3324#actccccctcgcttcaattctaatcccccccaaaccccctccaaaccctaaccctactacgacctccccttcctccgccgccgccgccaccgccaccgccaccgccacgtccagcctccggtcgcctgttcggatcgaagcggtgaggattcgcgcgtctcctcctcctcgcgttctcgccttcgattcgggccgtctcgtgcgtttcccttcgcgttctctgatttttttccggtttttggcgctctcgttttgcagatgtcgtcggacgatgaggtcagagaggagaaggagctcgacctctcctcctccgacgtcgtcaccaagtacaaggacgccgccgatatcatcaacagtaataaacgcctctcgattttacctttgctattactgtcgtgctcgagttcattattgtctgctttttgctgggtaatggcggtggttttgttatccgtaagcacgctagggaagtttatgctctgtgttgttagcgttaccttgtcttacttgggaaagattagcttgggaaagattagctacgggagtttagctgttttatttatggactatgttttggtaagggaagaatttctgtgatgtagacgatttacacggtttggattctagtgttagttttagcagcttcgttgaagagtaatatgctttctttctaggttagtagcatgctcttcttctgtattgtcactggctttctattcaatgagtgcaatattatgtctgagtctctgcctgtcgagaaatcatgtgcatagccacagagccactcactggattgcacagggatgtgcatttgtgtttagccttgtgttctgatgtctggtgttgtcagaatcactagttcctcctctacgttctcccgtccctcactccgctattgttgctcttacatgtatgaggtgattattctatgttttgttgaggggaaaatggtgctctgttatccagggtagatttgccacaggctttgttttgttttgttagcgtagccgtctttagctatttagttgagccaaaaaggttgttttttgctaagatatttgtttttgcccagtttgcaagtctgatatgtgatgttcgtagttaggtagtatcaactcaatataagtttcagatatcacaagtagagaggagttgtgagtaatatgtgttaagatagttcccttctttcctttgtccattcaattatgctggcacagtgccaatatcattttgttctgcgattgtgcctgaatgccaaatatgttgtcttctatggtgatactagaattgtagtgctaaattgatttttattggtgaacagatgctcttaagttggtagtgtctttgtgcaagccgaaagccaagattgttgacatctgtgagaagggcgattcttacataagagagtaatgcatctaactttgtcttaatgctctctctctctctctctctctctctctctctctctctctctctcgttttactgattacttattttttttctttattgatatcaggcaaactggcaacatctacaagaatgtgaagaggaagattgaaagaggtgttgcttttccaacatgtgtatctgtgaacaacacagtctgccatttctctccgctagccactgatgaggcagtcctggaggaaaatgatatggtcaaaatgtattgtgctgttctgaccttttcaacttgttcttagtctactttgagccttaatgattctattttcatttgacagtgatatgggatgtcatattgatggttttattgccgtggtggctcatacacatgttatccatgatggagcagtcactgggaaagcagcagatgttcttgctgctgccaacacagcggcagaagttgctctgaggcttgttagacctgggaagaaggtgcattgaaaagcgttgctttatttacttgctctctttttgcaatttatgctgttcacatttagtgtctaggtcaactgtgcacacaaatgttgtgcttgtttctcttactatgctattatgttttgctagacacacaaaaactgtttggtagtgagctaacctgtatgtcttctctgcaatgaattaattcagttgcatgcctttggtttgtattagaatgctgatcttgccagtaacaatttttcttttgcagaacaaggatgtcaccgaagcgattcagaaagttgctgctgcttatgactgcaaaattgtggaaggagttctcagccatcagctgaaacagtttgtcattgacggtaacaaagttgtacttagtgtgtccaatgctgatacgaaggtggatgatgctgaatttgaggaaaatgaagtgtatgcaattgatattgtcaccagcactggagaagggaaggtgagaatagctgcttttatttgaaggattgtcttctgtttgctttttttttttacatttttttttaattacgacgcacagcccaagttattggatgagaagcagaccaccatctacaagagagctgtagacaagaattatcacttgaagatgaaagcatctaggttcattttcagtgagataagccagaagtttcctatcatgcccttcactgctaggttgctacaataacgcttacttcagacgcacctttttgtttactatattgtaacatgcattttgaattgtcacagggcattggaagagaagcgtgcacgcttaggtttggtggaatgcatgaatcatgaattattgcagccgtaccctgtccttcacgagaagccaggtacacatatcatcgctctaggtgttgaatactgtagaattttggcaattgttctgccttgtttttatgagataagccttggggcgagtacaaatctgtatcctccttttgagattatttgtgtttatttgtacaaaccgcttctgttgattactgctacatgccatatttctcgtttctagtggttgtattaatagttggttgtttgtgcaggcgaccttgttgcacacatcaagtttactgtgcttctgctgccatctggttcacagagggtaacatcgcattcacttcaggagttgcagcccactaaatccattgaagacaacgctgagatcaaggcatggcttgctttggggacaaaaacaaagaagaaaagtggtgcaaaaaagaagaaaggtttgtcctgttctttgtaacacaattttactggtttttttgtatttaagttgcctcacctggatggaaccttcaactcacctaactaccattttgtcatctacaggtaagaaaggagatgcagcagaagcagtgcctatggaggagggttcaaatgatgcaaacaaagaataactgattgttcttttgaattgcttccgttagttttgtacttgctccactgcatctgatgctattatatcacattcagttgtggaaaatcgagtactttttcaaacttcctgggaaatgatccgtcctgctgcacactcattgtcacatgaaagcacaaaatgatgattacctatgatgtgtgtgattgttggccttctgtgctgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0350500, RefSeq:Os05g0350500