Difference between revisions of "Os05g0364600"
(Created page with "{{JaponicaGene|
GeneName = Os05g0364600|
Description = Similar to ASF/SF2-like pre-mRNA splicing factor SRP31'''|
Version = NM_001061858.1 GI:115463446 GeneID:4338552|
Len...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0364600| | GeneName = Os05g0364600| | ||
Revision as of 20:08, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0364600 |
|---|---|
| Description |
Similar to ASF/SF2-like pre-mRNA splicing factor SRP31' |
| Version |
NM_001061858.1 GI:115463446 GeneID:4338552 |
| Length |
6966 bp |
| Definition |
Oryza sativa Japonica Group Os05g0364600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:17452951..17459916 |
| Sequence Coding Region |
17453424..17453510,17454952..17455017,17456480..17456554,17456703..17456802,17456884..17456930 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:17452951..17459916 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:17452951..17459916 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgagccgacgcaacagccgcaccatctatgtgggcaatctccccggagacattcgcgagagggaagtggaggatctcttctataagtatggccgtattgtggatattgacttgaaaattcctccaaggcctcctggttatgcttttgttgagtttgaagaccctcgtgatgcacaagatgcaatttatggccgtcatggatatgactttgatggccacaggttgcgggtggagttagctcatggtggcagaggcccttcttttgatcgatcaagtagctatagcagtgctgggcgccgtggtgccgctaaacgtactgattaccgagttatggttactggattaccttcgtcagcatcatggcaagacctcaaggatcatatgaggcgagctggtgatgtctgtttctctgatgtttaccgtgagggtggagcaactattggaattgttgattataccaactatgaggatatgaaacaagcgataagaaagcttgatgactcagagttccgtaatgcattttcacgggcatatatcagggtgagggagtatgattctgctaagcgcagccgctctcgttccagaggtagaagccacagccgctctatctccagaagcagaagccgcagccgctcgatctccagaagcagaagccgcagttatagcagaagcaggagtccaagatctaggtctgcttctcggtctcactcacctgtgaaagaaagatctaggtcggcttcacagtctcgctcacctgtgaaggaaagatcaccatcaagatccccaccccctgctacttctcctcctcgtgaaaagtcagcaagcaagagccctgtcaagagcagaagtttatcccgatccccatctcctgtgaaatctgagtga</cdnaseq> |
| Protein Sequence |
<aaseq>MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRP PGYAFVEFEDPRDAQDAIYGRHGYDFDGHRLRVELAHGGRGPSFDRSSSYSSAGRRGA AKRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQ AIRKLDDSEFRNAFSRAYIRVREYDSAKRSRSRSRGRSHSRSISRSRSRSRSISRSRS RSYSRSRSPRSRSASRSHSPVKERSRSASQSRSPVKERSPSRSPPPATSPPREKSASK SPVKSRSLSRSPSPVKSE</aaseq> |
| Gene Sequence |
<dnaseqindica>474..560#2002..2067#3530..3604#3753..3852#3934..3980#4052..4109#4276..4325#4532..4588#4676..4818#4908..4949#5198..5239#6354..6387#6457..6525#6617..6631#gaagcttctcgagccctcctcctccgccgccgccgccgccgcctccgcctcgccgccggcgcagagtcgcaggttagctccgtactccgctcccctccccgaaccaagccgacgccgctgctggaatcctagtactcctgcgcgagttctagcgtgctctctctctctcccgtcccgtgccgttgcgtcctcgcgctttagttctctcggttgagcgagtgcgcgagtgttctgcttggttctccggtagatttggtagcccgcgatcatatctcctaggttttttttttccttcggttgagcggggcagcaattgaattcgtggtcgtcagggtttctgagagctggagatgcagtgctatgcttggtttgttttgctgtttgcgtgttatcgttacgtggcttgacgctacggccattgttggatttgtgcgtgctaatttagctgacttgatgtttgtctgtcaggaacgatgagccgacgcaacagccgcaccatctatgtgggcaatctccccggagacattcgcgagagggaagtggaggatctcttctataaggtgagccatgattacattacggattaggcatgtgtgtgccatgtaacagtgttatcctctagtactaaagtggtaggtcagtgcaaattttgttttggtatcagcgagtacatcgtaggctgcttttaggacttaggaggaagatatttgggggcaatactgctttcttatggaattataaatttgctatgttgggccctatggttttctgttgtgtggttggagcatttgttaaatacttcaatgtgaactagatatctaagttgcgtcttcacgcgaccataacctgtcttttatttacaaatatgataatgaattgtttgtaacagttacctatgttaaaatttaattcgtctagttgcagttttcaaattctacaattgaattttgttaaggattgaactttggagagtatttggcccaatttccgagcaattaggttgagatatagttttgcgttatgcatatcagtttgtttttctatttgttggttatggatatatctgtaggtgataggtattttttttatcttaattattcattctggatcatttctataaccgacacatctgaattttagacctgccagtattgtttaggacttttgtgaatatatgatttattatagttctattgacataaaatccatataatacacattattcgttatgtttattgggtctctgtggctatgtaaagatagtagtgataatcatttttatgtgcagtattttcactttatatggatttgatttcgctatatttattcatgtttgtaattgaatttatgaacaaattgagatagcaatcgaggtgtaagtggtggccatggatcgaagtactgacacgggtgatgttggctgaggaaatatatttcaacttgacagaagatttatcttaatatgagtttcacatcttgttagtaaaagagtttattttgcttttcttctaaacttgacctaggcgcacggagaaaagaggatggagtttgggcttgcagctgttgtagttaggatgcataccgatccaattaggcctatttatgtcaccgagttatacatgcaccacagctagagggtactctagaatactcctacatttttaacaactacttaagtttcatccaacggtaaagattgtttcgacttattttgtctttaagcgtatctgacggttcatattagtcagaagaagtggcacatcctggtttctttttgagatttacttttcacttggagagattccaccagtcggttgggcacttgggcacctctttgttgttgccatcttatgtggtgaactggtgataccgaaggatgttactggtagaagggtagaacaatggcatcttgtaattactaaattttctgatatctttattttcttgattattcatacagatagagtttaactttttttttcattacttttgcttctgcagtatggccgtattgtggatattgacttgaaaattcctccaaggcctcctggttatgcttttgttgaggtaagggattaagtatgttatggtgattacttgctatgagcacattttctatctagatttttgctcatctttttatatataagctatcattttatttagtcataaccttgttgttatttgaggatttttttttggggtctgtgagcaaatttagcacatgaaaaccgactacagacattagctttatcaaaatctaacccgaattggttgctattttttttaacttaaaaatggtccacactaaactggatagccaaagaaaactggacctttactaattcttttcgtatggtcaaaagttgccaaattttcataagataaacttcggcttggcgtgaaataaaacaacccctggataacaaactttagaggttctgttagaatgatgtgttaatatgaacccaggagtgttttgagctttgaataggaggtagcgaggtgggtaagcagagtgcttgcattctacccctgaatggacttcttcccaatcatggcaagaggactctaaggccggcaagtagatgcaagttgatgattaaataaatttcttggtttgaaatgaagcattctatggaagcttatatttcaggcatctcttagcaacccatgcgattagtttagagctgaaacaaaggaatatactatcgcaacaatttacccctaacgaactcctcaactggcttgcctgcttgcttattacaatgtgtgactacctctatataccttgctcagggaaaggaataggcaaatctctaaaatggataagctggcaagcacaggtttataaacaggagttaggtatgggttgtgtgatttgaacgatcaagtaacggatacaagacatagaccccctccaggtgcaaacattattgttctcatgctttgccttgctactacttctgttctttttatagaacattttttttatctataatcaatatatcatttttattatttttaggaaaagcagaatgggtagatcttggcgcgcgcgcgtgcacacacacaaaaataataataaaaaactggtttaagaatatctcgcttttgttatgttggacatgtggttctcattggaaactatgatgactaacgaaagtgcataggatgtgagcaaggggcaacttaagggttactatggaggcaagagaatggaaacacccaaatttgtttctttaagctcatgaggaatttgggggtgacggagactgacaaaaaatgtaggggatgagtgaaatttgacatacgatcaatgaatttttccatgtagcataaagacaaaggttagacaaacttgctttagaggaaacttaacaactagcctcaaatccagttttgccaagtgttgctgaactatctaaagaaatgcttgtcaaaattaaccttgtgcaatctgattgtacatatagcaccttagaggctaagaggacttgatactaactaaaagtggttccttatgcagtttgaagaccctcgtgatgcacaagatgcaatttatggccgtcatggatatgactttgatggccacaggttgcgggtaagtggatcttgcatgatatccgttatctttcttgagagaataccaggtggtgaagagggtagttcatatttatttatttttgttgcagcagcaaagaggatagttttgttctttgtcgtaatgttaatcttatacctttatttaggtggagttagctcatggtggcagaggcccttcttttgatcgatcaagtagctatagcagtgctgggcgccgtggtgccgctaaacgtactgattaccgaggtacgtacttctaaactcaagctttacaaacttgattggatacatcagtgttcttatttgctctattcatggaatgtgcagttatggttactggattaccttcgtcagcatcatggcaagacctcaaggtattgatgcagatgaactcccatacaattattcactcttcacgaatcttgagttttacttccattttcaggatcatatgaggcgagctggtgatgtctgtttctctgatgtttaccgtgagggtggaggttagtactgaacacttctatgctcttctgttgctgatattaattttggtatgaattgggcagtagtttgttttgataatacagcaaccatttaagctgtattatctttttccattcatgtttcagtagttcttacttcttaatactgaaatttcatgtgtttcagcaactattggaattgttgattataccaactatgaggatatgaaacaagcggtaagtttgaattagttctatgcattttactttccagaagtgaacactgccatgtgccatctggaaattcatgttttggttggttcctttaataatagaaaaagggcactttgtgatatgccagacacctactttctccccaatcatgcatgttcttatcttcccgtgaagatacacctgacaagcagttttttgttaccttacagataagaaagcttgatgactcagagttccgtaatgcattttcacgggcatatatcagggtatggtcatactggaaatgtttctgcacttcatttaacctaatctcaagttgaagatttacgtactcatggacatgtctgttaaaggtgagggagtatgattctgctaagcgcagccgctctcgttccagaggtagaagccacagccgctctatctccagaagcagaagccgcagccgctcgatctccagaagcagaagccgcagttatagcagaagcaggagtccaaggtatggtttgaatctcataatgctcaaatgaatttgttatggtaacaacaacatgaatattattacaatgtgctgttttttccttccagatctaggtctgcttctcggtctcactcacctgtgaaagaaaggtatgcacagttccattttgattttgaatttttcaaagttaagaaactgagtagctttggcatgtgttatcttcatattggctattgaaaaactgcacatgattttttaagaaatggaccccctccaatgttgattattgaaatttgattatgtaattagcctatgttatcccatatctccctcaaataattgcaagaaaggaaatgtcgttaacttaaatgagtttactgctgttctctgcttccagatctaggtcggcttcacagtctcgctcacctgtgaaggaaaggtatgcgtagttccatttcgattttgaattcataacatattacatagtacatggaatgctttcgattcattgcgatggtgtgatactgagattctcggattaatactatgttacaaagttaagaaactaagtagcatttgcatgcgttatcttcaatttgccaaaaaagaaactacatatgattttctaagaacccctccaatgttgtacattcaaatttgattatgtgattagcctgtgtgatcccatatctatctctaataattgcaatacacgaaatattgtaaaatgaaatagggccggctctttatattctcatataatttgtcatttcctttctggtttgtactttaaatgttatgctttcgagatgcattttttcttctgtacatgcactttgagtttccactctctgatgattaaacatgcagaaaactggatagctgtcatttgttgaaaatttgctcttgtctttcctagatttgggacatgcagctatttgggttgcgttggtaggatattggatgcgttgagaaccaaaggatggtttggaacgttggatagttctgctggctagtgacatactgtatgacaagtggactacaaccagcgataggagcaagatagggctggctctaaacatatttggacttatggagtgcatttcgtggtataattgaagtactattgacttacgcatttctattctcaaatgtaaacctcggccttgcacccctattggttattctcaaacataacctcaccttaatgttgaagtttatttctaaattacactttctgatgaaataagtgtgtttagcgattagctctttaaccaatttgtgatctattgtggcttcaccttcatttggaggactcgtgattttacttataaggtctgtcatagtttttcaaaagatgacatgttacatgtacagtggaaaaaggtggtccctttacctatgctcatccaaaacacttctccacatgtttactgtttattgctctcaatctcatgtgtattgatgttaccatattcacacatattttgatcaaactgttgtaatatccctttactgagtaacaatttcttggcttttggaacattttgcagatcaccatcaagatccccaccccctgctacttctgtaagttttccaaacaagtaacttatattctataaatttgttccatatagtaaccattgtctcgtgcagcctcctcgtgaaaagtcagcaagcaagagccctgtcaagagcagaagtttatcccgatccccatctcctgtccgtgacattaaccaaaaactctgtatttttgtgagcctttaatatgcttgaagtttcccatattgatatggtcaatgcttcctttcaggtgaaatctgagtgaagatggatgcacttgaagcctgccagaaactatttcatgatttgtggagctgagtttcggaaggcagtagattgtggattatggtttatctgtttctgcgttaccattgttgttacttttcagaagagagccgtgttatttcactgttgcttggtcatgtcgtaatatctgtcagaaacattgccttacatgcttagcgttttacttgccatcaccaatctatcagacctcgtagcacatggtgctcgaacttcatgctatacatacagcactatgaactctgctatattctaaagctcaactatctgtagtaactgcaggaagcctttgcgctt</dnaseqindica> 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