Difference between revisions of "Os05g0398100"
(Created page with "{{JaponicaGene|
GeneName = Os05g0398100|
Description = Armadillo-like helical domain containing protein|
Version = NM_001062007.1 GI:115463744 GeneID:4338712|
Length = 840...") |
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| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0398100| | GeneName = Os05g0398100| | ||
Revision as of 20:09, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0398100 |
|---|---|
| Description |
Armadillo-like helical domain containing protein |
| Version |
NM_001062007.1 GI:115463744 GeneID:4338712 |
| Length |
8401 bp |
| Definition |
Oryza sativa Japonica Group Os05g0398100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:19375959..19384359 |
| Sequence Coding Region |
19375959..19376049,19376153..19376277,19376351..19376468,19376612..19376676,19376818..19376897 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:19375959..19384359 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:19375959..19384359 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggaggcggagcagcagcagcagccgccgcatcgcccgcgccgcaaggggcagaagaggaagttggaggacgaggccgcggcctccgcctcggccgcggcggcggcggcggcggccgccgccgccgccgccaccgcaaccccgtcgtcgctcgggagcgccggcgcagacgacgacaacgaggaggaggaggacggctcggccgggccggagatctgctgccgccactcccaggcggcgctggcccgcgaggtccgcacgcaggtcgacgccctccaccggtgcttctcctggcgccacgccgaccgcgccgccgccaagcgcgccacccacgtcctcgccgagctcgccaaaaacgaggaggttgtgaacgtgatcgtagagggcggcgccgtgcccgccctggtgtgccacctgaaggagccgcccgcggtggcggtgttgcaggaggagcagcagcctcggccgttcgagcacgaggtcgagaagggggctgccttcgctctcggcctcctagcagtaaagcctgaacatcaacaacttatagttgacgccggtgccttaccactgctggtgaatcttctaaaaaggcacaaaaatgctacaaacttgcgggcagttaacagtgttatcaggagagcagctgatgcaatcaccaatctagctcatgaaaatagcaacatcaaaacttgtgtcagaattgaaggcggaattccacctcttgttgaattgctagaatcacaggatctcaaggtgcagagagcagctgcaggggccttgcggacgctggctttcaaaaacgatgaaaacaaaagtcagattgttgattgcaatgcgttgccaactttgatattaatgcttcgatcagaggatgctgcgattcactacgaagcagttggtgtcattggaaacttggttcattcatccccaaatatcaagaaagaggttctcaatgcaggggccctgcaacctgtaattgggttattaagttcctgttgtacggagagtcaaagagaggctgctttgttgctagggcagtttgcttcggctgattctgattgcaaggtccatattgtgcaaagaggtgcagtccgtccgctgattgaaatgctacagtcagctgatgtccaacttagagaaatgtctgcttttgcccttgggaggcttgcccagagaagttcatttgtttcccaggacacacataaccaagcaggcattgcatataatggtggtttggtgcctctactaaagcttctagactcaaaaaatggatctctgcaacataatgctgcatttgccctttacggagttgctgacaacgaggactatgtgtccgacttcattaaagttggaggtgtacaaaagttgcaagatggagaatttatcgtgcaggccacaaaggattgtgtagctaagacccttaagaggttagaggagaagataaatggacgagtgttaaaacacttgctttatatgatgagagtaggagaaaaatctgtgcagaggcgggttgctctggccctggcacacctctgtgcgcctgaagatcaaagaacaatttttattgataataatggccttgagttgcttcttgatcttctggtttcggtgagcctgaagcatcagctagatggttcagtagcactatacaaattggccaacaaagctgcagcactttctcccatggatgctgcacctccatctccaacaccacaggtttatcttggtgagcaatatgtgaacagttcgacactttcagatgttaccttcttggtggaaggaaagcgcttttatgcacatagaattgcattacttgcttcttcggatgcatttcgtgcaatgtttgatggcggatatagggaaaaggacgcgagagacatagaaattccaaatatcagatggaatgtgtttgaactcatgatgagatttatctatacaggttcagtggaagtaactagcgatatctctcaggatcttcttagagctgctgatcagtatctattagaaggcctcaaacgtctgtgtgaatatacaattgcgcaggatgtgaatgtagacaacgtttctgacatgtatgacctatctgaagcttttcatgcaatgtcactcagacatacatgtgtcctatttatcttggagcagtttgaaaagatttgcgtcaaatctgggtcaagccagctgatccagcgtgtcatcccagagctccgcaacttcttcgctaaggcgctaaggccaagccacaggaatgcgcagccatga</cdnaseq> |
| Protein Sequence |
<aaseq>MEAEQQQQPPHRPRRKGQKRKLEDEAAASASAAAAAAAAAAAAA TATPSSLGSAGADDDNEEEEDGSAGPEICCRHSQAALAREVRTQVDALHRCFSWRHAD RAAAKRATHVLAELAKNEEVVNVIVEGGAVPALVCHLKEPPAVAVLQEEQQPRPFEHE VEKGAAFALGLLAVKPEHQQLIVDAGALPLLVNLLKRHKNATNLRAVNSVIRRAADAI TNLAHENSNIKTCVRIEGGIPPLVELLESQDLKVQRAAAGALRTLAFKNDENKSQIVD CNALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLNAGALQPVIGLLSSCCT ESQREAALLLGQFASADSDCKVHIVQRGAVRPLIEMLQSADVQLREMSAFALGRLAQR SSFVSQDTHNQAGIAYNGGLVPLLKLLDSKNGSLQHNAAFALYGVADNEDYVSDFIKV GGVQKLQDGEFIVQATKDCVAKTLKRLEEKINGRVLKHLLYMMRVGEKSVQRRVALAL AHLCAPEDQRTIFIDNNGLELLLDLLVSVSLKHQLDGSVALYKLANKAAALSPMDAAP PSPTPQVYLGEQYVNSSTLSDVTFLVEGKRFYAHRIALLASSDAFRAMFDGGYREKDA RDIEIPNIRWNVFELMMRFIYTGSVEVTSDISQDLLRAADQYLLEGLKRLCEYTIAQD VNVDNVSDMYDLSEAFHAMSLRHTCVLFILEQFEKICVKSGSSQLIQRVIPELRNFFA KALRPSHRNAQP</aaseq> |
| Gene Sequence |
<dnaseqindica>8311..8401#8083..8207#7892..8009#7684..7748#7463..7542#7297..7360#5822..5961#5608..5731#5462..5521#5312..5380#5014..5163#4013..4120#3654..3729#3248..3342#1499..1573#1259..1379#994..1166#489..655#1..358#atggaggcggagcagcagcagcagccgccgcatcgcccgcgccgcaaggggcagaagaggaagttggaggacgaggccgcggcctccgcctcggccgcggcggcggcggcggcggccgccgccgccgccgccaccgcaaccccgtcgtcgctcgggagcgccggcgcagacgacgacaacgaggaggaggaggacggctcggccgggccggagatctgctgccgccactcccaggcggcgctggcccgcgaggtccgcacgcaggtcgacgccctccaccggtgcttctcctggcgccacgccgaccgcgccgccgccaagcgcgccacccacgtcctcgccgagctcgccaaaaacggtaaacgctccccccaccaccccgaaccctcgccgcaccgcaccgcgccgcgccgatccgtggttttccgcgccaggcttccgggcccgttcagctgaggcggatctggatgttgtgtttttcttcgcagaggaggttgtgaacgtgatcgtagagggcggcgccgtgcccgccctggtgtgccacctgaaggagccgcccgcggtggcggtgttgcaggaggagcagcagcctcggccgttcgagcacgaggtcgagaagggggctgccttcgctctcggcctcctagcagtaaaggttccctgttcgtgccgtactagtttttattcccatttcattgcaattattggtatttctttctcacctgagttatccaaatgtatcattccataataaaattaagagtagctttggatatgccatcgtctgccaaaatttaacccgagaacaactactgaacaagatagtaacacctaggaattcgtttagtagtttttatgtatacatgttccctatctccctttaagcgattcatggaaactggtgtttttgagcatgacctcagtaatatgtttttgatctaagttacttttgagaaatttagtcattaattacttaatgtgtttgcataacagcctgaacatcaacaacttatagttgacgccggtgccttaccactgctggtgaatcttctaaaaaggcacaaaaatgctacaaacttgcgggcagttaacagtgttatcaggagagcagctgatgcaatcaccaatctagctcatgaaaatagcaacatcaaaacttgtgtcaggtgttttttctatattttgttgatagtctgatgctccttcaactagggaactttttattgcttaatgatgtttttatattggtttactgcagaattgaaggcggaattccacctcttgttgaattgctagaatcacaggatctcaaggtgcagagagcagctgcaggggccttgcggacgctggctttcaaaaacgatgaaaacaaaagtcaggtgagatatcaaaatttcaaaataacgaggccaacattatgatatattttaacaccataatggtgcagttacatccatatttactcatactattttgtgtaattttccccttaatgcagattgttgattgcaatgcgttgccaactttgatattaatgcttcgatcagaggatgctgcgattcactacgaagcagtaagacactaggaatttattttttgtgaattatgaaccacacttctctgggaactcttttatgttaaggttgatgctgactgatatgcattgattgattatgcggttagtgttgcaaattttctagttatcagcaatcttgagcagcagttatcctaatgtgttctagaacataaatttcgaagtgctcatccttcatggccagggccacaaaaatcactttgtgttctcccagaacaagcaaaccctgttttcttgtttactgcaacaatttttatttaaagttctttttgttgaattcgattcaggttttctactatatcggcctccaaacaacatatggcaacaaataacaacaaaatcaatcaactactccaaaataacataggggaactggcagctacagtgctactacagtcatggggaatttgtaacaagcgtgtgaccattattttgaaccctctctacaacttaacattgaatatagaactacgggtaatgtgttacatagagaaccatggactactaaacttgattgcttgaaatgaacctagtgcgctaacatattaaagagtataaacttgcatgacttggacaaagcataaacaagcatgctgaaaagtgaaaacttagcatgaaattggtcaaccgagccaattaggtccatccgcaggtttaatgaaggtaaaaatgtcatgttaggctgttggaccgataaaacaaatttaatacagaggtattgatgcttaagatccatatcatagttaatcatgtcagttttctacttttctggcacttgactggaggatgggcatatctaactaactggttctgtaagcaatttgaggggacctgccaatctaaaattgaaattcaagagcttttgttacagagatcaacaaatttgatggcctattgacctattccaccgttttagaattattagtagccaaatacccgtgcacagtaacgatttagaataatttaccagaaattctaaacttgaaaaaaaaatcagttgaacatcaatctccaaataattcgatcacaaaccacatgtgcaaataatataattatcgagggaatattcttcaaccagtaaaaacatatatgtatgtatctatgcagagcacccacccgttgtactggtgtgggatggcagagccaccaccactactaccatcattagcttcttttgtaatagtagagataagcatggtgaaaaaacatcaattactgcaaacagcctaacaatgctagttatacacttcattgtcttacatagtaacttgatcctgtgatatccacatagaacaagtaaatcgcatgattatggtcttgacactgactcttctccatcaagtatttctatcagtactatgtatattcatatagttatacacttcattgtcttacataggagtaacttgatcctgtgatatccacatagaacaagtaaattgcatgattatggtctcgacacttcctctactcttctccatcaagtatttctatcagtattatgtatattcatatcattttggcttttttgcaccttgcaaggcttcctgtctgtatgaagtcttctattgatacaacaagcaagttattgaactacacttatgtactatctttttataatgcatgccaataagtactctgttcacatgtcaggttggtgtcattggaaacttggttcattcatccccaaatatcaagaaagaggttctcaatgcaggggccctgcaacctgtaattgggttattaaggtatgatcgtcatatgcagtttaggatcatatttttaaactatctttgaaaataattgaatgcattagaaatattttatgtatttgttgaaccctattgctgatgactcaaatgtaatatatttttttagctcagcatgagaacttttaacatttccaattactatggtagtaactgcttgcttcatggtacactccatacaattactttgaattgtacgcatgtttctgaatgatagttagcttacacctttactgctttaaattgagaatattaagttggctattatcttatggctgttcattttgcagttcctgttgtacggagagtcaaagagaggctgctttgttgctagggcagtttgcttcggctgattctgattgcaaggtacttgcttgttcttcgttcatttttagctggcttgtttctaattcttttctgatgagttaatgcagtggaggagcaaaaaacaagcttaaataagtttcccttgatataatattctggtgtgaaagagatgactgttctgttatgttttgctacttgctaaatattttatgtgcacaatagaaggtttaagcatggaattctagaatatatgaatgaaaagaagctgatgttttcttaccttttcgttgtttaacatcctgtgcatgtgtattccctacaggtccatattgtgcaaagaggtgcagtccgtccgctgattgaaatgctacagtcagctgatgtccaacttagagaaatgtctgcttttgcccttgggaggcttgcccaggtttgttagcttgttttactgtgtgtagtttagggacaaaacactgaaaaagaacaacactgacatgccacttagtaactttgctcctcttaattctaacaatggcagctgtatgttaggacacaattataacaataattttgaagaaattataatgagtcttcactcttgaatgaatagatataggctccttaccgtgtgttcttttgttattcgtcggcacagtagtgacttaacaacagtttaggtataatatatctgaatagctaaagtatcccagctcattctccatacaggcaaacttttcatactaacttttgagcacctgagagtcgtgcctttcaaatgttcattgcgcagagtatccactatcctgtgaagagtaacactggatattttctagacctgaatctgtgcatgtgggaatggtcctatagtgagggcaagatcccatttggtcattggctgattcttgcatagtgatgacttgaagtcacccatgcaaatacatctgtagaaccgagagaataatttctgtcacttgattatttgattatatttatgcaagggacaatccacatgcaatcatactaacatcttagaatggtgatactaacatattttggtctttgtaagccaaaagctctgcatatacccagatatcgcttcatgcgtaatgcaccagttgaaacatgtcaaaatgatcatcgatataacatgttggatatattattcttttgcctatcaattctactttgctctcagcagagcacattctgtatgttagtgatgaagtcagatatctgagacacagacctagttattttcttctcaaaaccctaggctgtaaagatattaaagaacttctataacatgcaccggtcaattcacagagaagttcatttgtttcccaggacacacataaccaagcaggcattgcatataatggtggtttggtgcctctactaaagcttctagactcaaaaaatggatctctgcaacataatgctgcatttgccctttacggagttgctgacaacgaggtaaataatgattattcaagcaaatggtaacccatttgtggatagcttgttttccactagtaggctaatgattcgatttcggaaaaggaaacgatctcttactttattttttttttcaaaataaatgactatactcttcttattgtaggactatgtgtccgacttcattaaagttggaggtgtacaaaagttgcaagatggagaatttatcgtgcaggtatgccagccatcatattattgttggattactttcaatgtaacttgcaagtgagtttaattacgtaattttaaatttcaggccacaaaggattgtgtagctaagacccttaagaggttagaggagaagataaatggacgagtaagctgtgctcagtgcccaccagattttgcttttccatcgccacattctagcatttagcttattttgttcctgtatgaccgcaggtgttaaaacacttgctttatatgatgagagtaggagaaaaatctgtgcagaggcgggttgctctggccctggcacacctctgtgcgcctgaagatcaaagaacaatttttattgataataatggtatgagcaattttaaatgcaccaaaatgtgctcctttgtattacttttgtgtaatgtttaccattgattaagttattaaattaattcaggccttgagttgcttcttgatcttctggtttcggtgagcctgaagcatcagctagatggttcagtagcactatacaaattggccaacaaagctgcagcactttctcccatggatgctgcacctccatctccaacaccacaggtagagaattggttcttaattcaacccaacctttccttgtttatgccaaaggctttatgagttgattgtggtgtgctatgtaaaaggttttcaatgtgatatggactgaactacgatgtggtaatgcccatgcattgattttattttgtataatcaatgcattaaaagggtttttttgttagaaataaacaaaacagtacatgtttaggggaaatttgtgtaatgcaacaaaactagctaattgttggctgacaatcttgtttgattagtattttgacaggaaattggaggtggatgtataatagctgtaaataaatatgcaacacagattcttggcttcttggttgtgcgaattatgtgatagctgcggaaaattgttgcaaaatattaactaaaggaacaatcctgtacattcatcgccaatatttcattaagaagcttagggttactaggatgtgaatattaatagctaagtttaatgctagttttaagttgaaaaaagaaacattagtttacataacttataacatactgtaacatttcagttgaaccacccaacagtttttcaaacttgtactatcttaagttaattttggagcagtctatgataatagttttttaagacctatgtgttatttgactcgtcagtagcggtaacattgcctttaatcatgttcttgttgccttacctcgaaatttcaaagtttttatcatgatattggtggtacaactgttgccatgaaattctagaagtatgattgactgatattccccatggctcatgtaaactaaataatagaaacatctgtcataaatactgatataaatggtgcttcatctcgcaaattgcacaacagcctcgtcacactttcacacttatttatatacgtttcatcctagtcaacactatgcatgatttcccattcatgtcttttaagatgtgtgaccttcaggccatctgctttctgagcaaaccaagcatttatttcctttgttaggcttttgtaggacaaaacttttaggaactttgtcagacatgaccaagttgttgcaagatttgaattcactcaggcagtatgtatgcatctgtgcatttctatggattatttttatcctcagccttcagagcatagcgcacatagaattcagatatactgccatctgaatttatatgccggatagtctgttcctaattagcagtcagtcctattaataaggtgttatctcagtaaaacctagtttgtgcaatgctggattcgaatatatcatttggagcaattggtccatcaacagtgctggcaatccctgatacttaatgtattttcttcattgtaggtttatcttggtgagcaatatgtgaacagttcgacactttcagatgttaccttcttggtggaaggttggtattttatctgtggacccagttgtcaccagaaagtcactttagatacttcgatcttttccatagaatccatgtaaatcatattcctgttgtctccaggaaagcgcttttatgcacatagaattgcattacttgcttcttcggatgcatttcgtgcaatgtttgatggcggatatagggtgagtcttgtgtagcatttcttttttcgtttggtacatgtggatttgtttcttagtggaacaattcttgttgaggtatattttttcattttttaaagaacctcaatgtgtcttgactcgaatactatttttcttaaccaggaaaaggacgcgagagacatagaaattccaaatatcagatggaatgtgtttgaactcatgatgaggtaagtcagctttgagttctcttcctccttggccatggacgctttgcttctgtgcacatatctgtaattgttattattcttttctggtttgtgggcaaatgcctgctaaactagagtctgaatatcctatttggtatatgcagatttatctatacaggttcagtggaagtaactagcgatatctctcaggatcttcttagagctgctgatcagtatctattagaaggcctcaaacgtctgtgtgaatatacaattgcgcaggtaattaggattgttacctgtatgctatgctcaaaatgctggcttggtcttatttaatatatctgccttgcaggatgtgaatgtagacaacgtttctgacatgtatgacctatctgaagcttttcatgcaatgtcactcagacatacatgtgtcctatttatcttggagcagtttgaaaagatttgcgtcaaatctgggtacacttcctcacctagtgtcctgttcctaggtccaaatgtttgtgttatgtaactcattttaggtaacagaaatcatttgccatgccattttgcaatgcaggtcaagccagctgatccagcgtgtcatcccagagctccgcaacttcttcgctaaggcgctaaggccaagccacaggaatgcgcagccatga</dnaseqindica> 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| External Link(s) |
