Difference between revisions of "Os05g0423400"

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(Created page with "{{JaponicaGene| GeneName = Os05g0423400| Description = Similar to PISTILLATA-like MADS box protein| Version = NM_001062125.1 GI:115463980 GeneID:4338842| Length = 2303 bp|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0423400|
 
GeneName = Os05g0423400|

Revision as of 20:10, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0423400

Description

Similar to PISTILLATA-like MADS box protein

Version

NM_001062125.1 GI:115463980 GeneID:4338842

Length

2303 bp

Definition

Oryza sativa Japonica Group Os05g0423400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20766336..20768638

Sequence Coding Region

20766418..20766620,20766757..20766823,20766920..20766978,20767145..20767247,20767375..20767404
,20767517..20767561,20768202..20768342

Expression

GEO Profiles:Os05g0423400

Genome Context

<gbrowseImage1> name=NC_008398:20766336..20768638 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20766336..20768638 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcgcggcaagatcgagatcaagaggatcgagaactcgacgaaccggcaggtgacgttctcgaagcgccgcgccgggatactcaagaaggcccgcgagatcggcgtgctctgcgacgccgaggtcggcgtcgtcatcttctccagcgccggcaagctctccgactactgcacgcccaagaccacgtccgtgtttcccccgctgtcaaggatcttggagaagtaccagaccaactccgggaagatactctgggatgagaagcacaagagcctcagcgcagagatcgatcgtgtcaagaaggagaacgacaacatgcagatcgagctcaggcatatgaaaggggaggatctgaactccctgcagcccaaggagctgatcgcgatcgaggaggcgctcaacaacggccaggccaatctgcgggacaagatgatggaccactggaggatgcataaaaggaatgagaagatgctggaggacgagcacaagatgttggcttttagggtgcaccagcaggaggtcgagctgagcggcggcataagggagctggagctcggctaccaccacgacgacagggacttcgcggcctcgatgccgttcaccttcagggtgcagcccagccaccccaacctccagcaggagaagtag</cdnaseq>

Protein Sequence

<aaseq>MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVG VVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKE NDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDKMMDHWRMHKRNEKMLED EHKMLAFRVHQQEVELSGGIRELELGYHHDDRDFAASMPFTFRVQPSHPNLQQEK</aaseq>

Gene Sequence

<dnaseqindica>83..285#422..488#585..643#810..912#1040..1069#1182..1226#1867..2007#accctcttgtttcttcgagagcgaggtgaagatttgtttcttggtttgtgttcttggagtggaggaggaggaggagttggatatggggcgcggcaagatcgagatcaagaggatcgagaactcgacgaaccggcaggtgacgttctcgaagcgccgcgccgggatactcaagaaggcccgcgagatcggcgtgctctgcgacgccgaggtcggcgtcgtcatcttctccagcgccggcaagctctccgactactgcacgcccaagaccacgtccgtgtttcccccgtctctctctctcctcttccttgtttttttttcttttcttcttttcttgctcttaatttcagtgtttcctgagatatgcatgttctctttgcattgtgtttggcctttaatttgatttgtttttttggcgttttaggctgtcaaggatcttggagaagtaccagaccaactccgggaagatactctgggatgagaagcacaaggtgcgtgcttttctggattattttttttccaaacttttattcctacaaaatcgaatagaaatgcttaaaaaaatgtattcttggaaaacgtttcagagcctcagcgcagagatcgatcgtgtcaagaaggagaacgacaacatgcagatcgagctcaggctagtgtcccaacttattactatcatgcatctttatttctttcacttcctattaattaaagagacaactataaatcacccattgtagcgttttcagctttagattttgctcttgttggggacatcagggatggtggtgatttgtcaagcctgttccatgttgcaggcatatgaaaggggaggatctgaactccctgcagcccaaggagctgatcgcgatcgaggaggcgctcaacaacggccaggccaatctgcgggacaagatggtgattactgtctttgaagcttgatgtttacttcagcatggcatgcagagattgcaagtgccgcatctcttctttttcagagagagtttttgtttctgatgtcacctttgtttccatgatgttgcagatggaccactggaggatgcataaaaggaatgtatgagctctagatatctggatgattcttgtgcttcttttgtggatgatgaagtcaatatcttttgcaagctctgatcactcacctcacatgtctctgtgttcggcttcaggagaagatgctggaggacgagcacaagatgttggcttttagggtggtaatttccttcagagtaacttgtttttctattgaactttcacttgaaaaattccttgtgttctcatttctatttctaaaaaccatctgaaattgaggacaaataccatctgatataactgctctaactgttcaactaggttcgataataagtgacccttcgtagttgcgcctatcactactttagctatttttcagtgccatgctcattctaatgcggtcacttagatcactggtcaatattcaatcagaaccattctacgcaacaaatctctagactaactacccctgcattcagaattcatatagcgattgaaaattgaactccgtgcacggtagtagtagtagtcagatctattgtttctaatcaattgctatatggattcagaatgcaggtgtagtttgttcatatatgacaaaacatcctattgaatcttgaccagtgatctaattgactgctccattagatgttatcatctatgaacaaactacccctgcattctggatccatatagcaattgatcagaaatgccagatctgattactacttccctgcacagagctcaaacctcagtgagggaagctttactgaaagaagcctgaaagctgagagttcactgagctcctccccgtgttttcagcaccagcaggaggtcgagctgagcggcggcataagggagctggagctcggctaccaccacgacgacagggacttcgcggcctcgatgccgttcaccttcagggtgcagcccagccaccccaacctccagcaggagaagtaggctgctgagcactgccaatttggctgaacctcctgcttgctagctttgcatttcctcatgcgctgctagatgtatctgtggtttctctcatgcctgtctgaatgaactcacactgatgagagggtgtcagttgttttgtgctcctcccagcattagcactcagaattcagaaatgactcaatgtcagttgcttttgtgcttctcccagcattagcactcagaattcagaaatgactcaatgtcagttgcttttgtgcttctccctgcttgtttaattagccactgttcttgtttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0423400, RefSeq:Os05g0423400