Difference between revisions of "Os05g0459600"

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(Created page with "{{JaponicaGene| GeneName = Os05g0459600| Description = Protein of unknown function DUF246, plant family protein| Version = NM_001062286.1 GI:115464302 GeneID:4339009| Leng...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0459600|
 
GeneName = Os05g0459600|

Revision as of 20:11, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0459600

Description

Protein of unknown function DUF246, plant family protein

Version

NM_001062286.1 GI:115464302 GeneID:4339009

Length

6107 bp

Definition

Oryza sativa Japonica Group Os05g0459600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22626148..22632254

Sequence Coding Region

22626148..22626570,22627836..22627924,22628573..22628770,22629431..22629635,22629705..22629872
,22630051..22630218,22630300..22630490,22631732..22631835,22632241..22632254

Expression

GEO Profiles:Os05g0459600

Genome Context

<gbrowseImage1> name=NC_008398:22626148..22632254 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22626148..22632254 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgggccagacgtacagccgcctcggcagactcggcggcgcgccgtccccgccgccggtgccaccggctgtggcggcggtggcgtccctgcagcggggcgggggcgggagtgggaggaggacgccgggtaaggggggctcggcgtcggcgtcggcggcggcggggtggacgggggtcgggtgcggctgcgcggcgaggagggcggcgagggcggtgctcgcggcgctgcaccggaggcaggcggtgttcctgttcgcgccgctgctgtacgtcgcggccatgctgctgtacatggggtccatcccgctcgacgtcgtgccgcggatcgtcgcgcgcccggcgcccgggtcggtgtaccgcagcccgcagctgtacgcgcgcctccgcgccgacatggacgccgacaactccaccgacgcgatatgcaatgcagttgctatcgccggtttcttgaacgccactcttgttatcccaaacttccatttccatagtatttggagggatcccagcacattcagcgatatttatgatgaggctcactttgtaaaacgtcttcaaaatgatgtacgagtagttgaaaaggtgcctgattttataatggagcgatttggccacaatcttagcaatgtattcaatttcaagataaaggcttggtcccctattcaatactacaaagatgctgttcttcctaagttgattgaggaaaggctcatcaggatttcaccctttgcgaaccggctgtcatttgatgcccctccagttgttcaacggttgagatgcttggctaattttgaagctttaaaattttccaacccaattgcgactctatctgagaccttagtctctcgaatgaaagaaaaaagcacggcgagcaatgggaaatacatcgcggtgcatcttcgttttgaggaggatatggttgccttctcatgttgtgtctatgatggtggtgatgaggagaagaaggaaatgaatgcagccagagaaataggttggagagggaagttcactaagcgaggacgtgtaataaggccaggagtgataagaatgaacggaaaatgtccactcacacctttggaggttgggttaatgcttcgtggaatgggtttcagcaataatactgcaatttttttggcttctggaaaaatttacagagctgagaagaacatggttcctcttcttgaaatgttccctctcctacagacaaaagaaactttagcatctgctgaggaacttgctccatttaaggatttctcctcgaggatggctgctattgactacagtgtttgtgtccatagcgatgcttttgtgactacacaaggtgggaatttccctcatttccttatgggtcacaggagatacttgtatgctgggcattcaaggacaattaaaccagacaaaagaaaactagccatactatttgacaatccacgtattggcatcctatttttggggaggcgcatagttcatggaggtactcccaacaaggctcgctgtgctcaggcttatccgaatgatgcatttggctacgcccgccttcatgaatgcgcggcataa</cdnaseq>

Protein Sequence

<aaseq>MPGQTYSRLGRLGGAPSPPPVPPAVAAVASLQRGGGGSGRRTPG KGGSASASAAAGWTGVGCGCAARRAARAVLAALHRRQAVFLFAPLLYVAAMLLYMGSI PLDVVPRIVARPAPGSVYRSPQLYARLRADMDADNSTDAICNAVAIAGFLNATLVIPN FHFHSIWRDPSTFSDIYDEAHFVKRLQNDVRVVEKVPDFIMERFGHNLSNVFNFKIKA WSPIQYYKDAVLPKLIEERLIRISPFANRLSFDAPPVVQRLRCLANFEALKFSNPIAT LSETLVSRMKEKSTASNGKYIAVHLRFEEDMVAFSCCVYDGGDEEKKEMNAAREIGWR GKFTKRGRVIRPGVIRMNGKCPLTPLEVGLMLRGMGFSNNTAIFLASGKIYRAEKNMV PLLEMFPLLQTKETLASAEELAPFKDFSSRMAAIDYSVCVHSDAFVTTQGGNFPHFLM GHRRYLYAGHSRTIKPDKRKLAILFDNPRIGILFLGRRIVHGGTPNKARCAQAYPNDA FGYARLHECAA</aaseq>

Gene Sequence

<dnaseqindica>1..423#1689..1777#2426..2623#3284..3488#3558..3725#3904..4071#4153..4343#5585..5688#6094..6107#atgccgggccagacgtacagccgcctcggcagactcggcggcgcgccgtccccgccgccggtgccaccggctgtggcggcggtggcgtccctgcagcggggcgggggcgggagtgggaggaggacgccgggtaaggggggctcggcgtcggcgtcggcggcggcggggtggacgggggtcgggtgcggctgcgcggcgaggagggcggcgagggcggtgctcgcggcgctgcaccggaggcaggcggtgttcctgttcgcgccgctgctgtacgtcgcggccatgctgctgtacatggggtccatcccgctcgacgtcgtgccgcggatcgtcgcgcgcccggcgcccgggtcggtgtaccgcagcccgcagctgtacgcgcgcctccgcgccgacatggacgccgacaactccaccgacgcggtcagtggctcctcctttgcaggtttactgctgtgtgtgtgtatttcagttgcaatgtggcacaaatgtctgaccattatgatgattagctgtgtctgctcctgtaatgttcgtattggtttggtgtagagagtgtttcagttaactgagattttgtttgctctttcgcaaatttatgttgttgcgaggtgacagggacagctaattttatatcaaatctgaaaatgggcgacttaagcttgcactaacaaaattctcagcccttgcaactgcaaggccattgattgcctgactaagaattgtttaatttctgctacccttccagttgttctaaattgctcggtgggtagattgctcttcatcagctgtcatgaaatgactgagtgatgaatcaaattagaactaagcgggtgtgtattctgtacccatcttatatgatgcaatacttatgcaaaggatcttcagtaaagcatgttagttagagtggtgtacaagaacattctttttcatgtatttgcagatgttttcctttcctatttcaaattaactgtagcaatggtcacttcttatttacttttgtgctatttccatctttggttgtttcactcgtactgatatttttctagcttgcaaccctgtggaggtacaaaggcagtctctggcgaccttgcataaacaatgctaccaatagtatgtcatttactggacttaaccttctcttttctttatggaacaagacacaatagatgttaaagtttgcccatgttcctgttttctaaaattgcttatttttccttcaggaatgtttttaatgtaatccaatgagttttacttgttatttttccataaacatattacacttatgttgtcacataattgggtaattgggtaacatagaaagagttagcttatgaggaatttagatatttttgaacatgttcaacgcatgattatatctccctctttttttggcaacttccatgccatgtgggtgggtgccttttttacacaatcgaatgctgacagtatttcaggttaccaccttacaatcttttttttacttttttattaggtctgcctgaatcaaatggatacatatatattgaggcaaatggtggtttgaatcaacaaaggacatcggtaattgcttctcctcagcagttcattccttccaacagtttacattcgttctcgccatgccttttgtttgtctatcttgagttactcacttttgtttcacttgtgtttttctttctggttttcagatatgcaatgcagttgctatcgccggtttcttgaacgccactcttgttatcccaaacttccatttccatagtatttggagggatcccaggtattttcttattagacttagcagttagcacgtaaaactggcatgacagagttggaccctctcgtgaattaaaaaatgccatacactaatcaccttctaatagcagagaataaaataatgattgcatgcataacaaaggatgtaggaggtgttaacagaatgtaaatgcgtgcttgcatggttgtcaacttgtcacattgtcatctgcactagttctcccattctatggctgcatattcttaagatcacatatacaaatttgtagatgtggagagtgacttgtacatgactgcacaggtatcacataaaaaggccaaagtttgtaatggttgtttcttagttgtctgtcatatcaaggactgtaagagttattctggcagttctaaaagtatgtgattaatcaattctagcagacacattggctgacttgtttgttgaatggatgtagctttgggtcacctgttgcaaacttgcattcttatcaagttctttaacgatcattgtttttttggaaatgaattcaactgttctatacacttagtaaacgttgatctatatgactgaagaaagtaacatctatggttattagaaatcgatgcttatggtaacaaaaaaaaaacagttactgatatatccttttggatacagcacattcagcgatatttatgatgaggctcactttgtaaaacgtcttcaaaatgatgtacgagtagttgaaaaggtgcctgattttataatggagcgatttggccacaatcttagcaatgtattcaatttcaagataaaggcttggtcccctattcaatactacaaagatgctgttcttcctaagttgattgaggaaaggtgagatagaaactaatccagttatttatttaatgacttaaacttacatatgcacccgattttccccaatatcctcacttggaccaggccgacccaatgcccgcaacattttggactcacttgtttattattgtaacatgtagatttcgttttgtctttataatcttagatgtagttaacataacctcattatatgattactataaaaagagtataaaacttagagaaactgcgctaacagggaatcaccaaagaaagttgattcagacatcccaccacataattttgtttttactcaatgttgtattgacctataattatttagtgtagagcatcctaatattaacagttttcactcacctatagtgtgtatcatctctttaacccatatcattaaatttgtcctagtgggattccagaatcttggatatcagccataggagtttgagtcaccattctaaagaatgttaaattggttacagcttgatggcctgatgcttctctctacatctagatggatcaataaattatgaaatttgtagagttaatagcaaaggactgtttccctgtttacgtagatacgtagtcaagataatgtggaattttgcctgatgctgtttgtttaaaaagtgacatcttttactactatgcaaagcgcaggctcatcaggatttcaccctttgcgaaccggctgtcatttgatgcccctccagttgttcaacggttgagatgcttggctaattttgaagctttaaaattttccaacccaattgcgactctatctgagaccttagtctctcgaatgaaagaaaaaagcacggcgagcaatgggaaatacatcgcggtgcatcttcgttttgaggaggttggattctttcctagaagatttacctatctttagtagcggaggtatccactaactgtttccttgcaggatatggttgccttctcatgttgtgtctatgatggtggtgatgaggagaagaaggaaatgaatgcagccagagaaataggttggagagggaagttcactaagcgaggacgtgtaataaggccaggagtgataagaatgaacggaaaatgtccactcacacctttggaggtactaccatgtctaatagcagaaatactgcccgtagtggagttttagaactttcgtctcaatctcattatgctgctccatgctcttctcattttcttttcacccataacatcaatttaatataggaacactgcaggaattatcaggaagatttacttgcttatgttacaattttcaggttgggttaatgcttcgtggaatgggtttcagcaataatactgcaatttttttggcttctggaaaaatttacagagctgagaagaacatggttcctcttcttgaaatgttccctctcctacagacaaaagaaactttagcatctgctgaggaacttgctccatttaaggtattgtggtagttgcaacttctctttgtgtggttctagattttgttctattcattactctaaaggatttgtggttgccaggatttctcctcgaggatggctgctattgactacagtgtttgtgtccatagcgatgcttttgtgactacacaaggtgggaatttccctcatttccttatgggtcacaggagatacttgtatgctgggcattcaaggacaattaaaccagacaaaagaaaactagccatactatttgacaatccacgtattgggtatgatgttgtgccgtgcatttacttttatgtacttttttttcaggccgtatagcattttctacgctataaacttcatgttgatagtcaattttctctgtttctctgcagatggaaatcattgaaacggcacttgcttaatatgagaacacacagtgatgctaagggggttgaaatgaaaaggcctattgaatccatatacacctttccctgtccgaactgcatgtgtcgcttgaacagaacagaaaattctaaacacaatcaaactagatagcatctcaagtgccatttcagtggactaactttattctttctggcttcatggtataattggttctggttcattacttcagtgagcattaccttatcacatcattgtacagtaacccattcttttccggtgacagtttttttctttgtccttgaaatcatagtccatcctggagctaagaactaacaatacatttgctcattagcattcaacaaacagatctgacacctgtagagctgtagttgtagtcagtgaaatatcaaccagtttgatgtagtactaacccttgtacatgtgtatagttgacaatatgatgtatgatactatacaaattttgaatggacaacaagtatttgtgaatttgatttttgttttttctatcttgctctaaaaatggcagctaccaccattttccccctttgtgttctatagctaggtcttctcctctgttgcaactttgtctgacactgcactattttcaactgaaatagcaagatgctctacttgattatctctcatgttgacccaaaaatactatcatctcacttttatatacttgtcaagctgcttggtgatgagaatctctgaaagattaccccgattgatcaagtttttatcatctgttcatcttctgcacatggtaaaccattccttccttgtttgtacatgtattctgaatacttcattgagttcattctggtgtagtaggaccgaacatttaactttggcagagccagcagcaggctttggtcactgaagtctgaaggtggctcacatgcaagaccgttggtgagcaatgggaatctgggtctgacgaatactcgttcatattaaacgacaagtcttgacgaaatgaagccagtctgcctgccagtgagctcaacatgtctgattttagcttcccttttcttttttttcccttaaaaatggcagatttagagtaacccttttcatcatcctttcttatcagcatcctatttttggggaggcgcatagttcatggaggtactcccaacaaggctcgctgtgctcaggcttatccgaatgatgcatttggctacgcccgccttcatggtgagaaaaaaatgttttcctttcctcttgcctttcacgtgctttgtttcgtccccccaaagaaatctctctatcggcagacaaacaactgaagcctgcattaaaaagagcaaaaatcattagccaaaactattcttcctaggtgcctttttccaaaatgaatttagtctagatcccatgcaagtactgatctgtaggtcctgggcagtttaatgaaggcgttctggctctttttttttctttttacctgccctctattgggcttagatgtttgatgtttcgttacataagatatagtgggtaagaaatggaatccgctcttcatgaaacacaaactgcaatagcaaataggagacggatttttttgtcttgcactcttacctgattcttgattcttccatgtagaatgcgcggcataa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0459600, RefSeq:Os05g0459600