Difference between revisions of "Os05g0539900"

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(Created page with "{{JaponicaGene| GeneName = Os05g0539900| Description = Protein of unknown function DUF1230 family protein| Version = NM_001062712.1 GI:115465154 GeneID:4339462| Length = 1...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0539900|
 
GeneName = Os05g0539900|

Revision as of 20:14, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0539900

Description

Protein of unknown function DUF1230 family protein

Version

NM_001062712.1 GI:115465154 GeneID:4339462

Length

1567 bp

Definition

Oryza sativa Japonica Group Os05g0539900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26881975..26883541

Sequence Coding Region

26882094..26882577,26882663..26882709

Expression

GEO Profiles:Os05g0539900

Genome Context

<gbrowseImage1> name=NC_008398:26881975..26883541 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26881975..26883541 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgctcccctctcccctcctcctcccctccacgcgcgcctcctcctcctcccgcctctcctcccgacgatggccgggggctcccgcggacggcggcgggggcgggggcgccgccggttcgcggtcccgccgtcgcggaacgggagctcgtcgcaggggacggagtggtgccccgtgccgccggagcagctgccggtgaacgagtacgagtcgctggcggcgtcgctgcccttctcgtgggcggcgggggacctcacggtctactgctcccgcctcgcgctcaccggcgccgccttcgcgctcttcgtcggcctccccgtcgcgtcgttcggcggccgcggaggggccggcggcgacgccgtgcacctcgcgctcggggccaccgggtccgggatactggccgtcacgctcgccgtggtgcggatgtacctcgggtgggcgtacgtcggcaaccgcctcctcagcgccaccgtggagtatgaggaaacgggatggtacgacgggcaggtgagatactacgcttga</cdnaseq>

Protein Sequence

<aaseq>MAAAPLSPPPPLHARLLLLPPLLPTMAGGSRGRRRGRGRRRFAV PPSRNGSSSQGTEWCPVPPEQLPVNEYESLAASLPFSWAAGDLTVYCSRLALTGAAFA LFVGLPVASFGGRGGAGGDAVHLALGATGSGILAVTLAVVRMYLGWAYVGNRLLSATV EYEETGWYDGQVRYYA</aaseq>

Gene Sequence

<dnaseqindica>120..603#689..735#tgtgcagtgagcttactgaagtctgcaacacgaggcagagccacgcacgcaacgaaacccgaagccgttgcttcgcggctctcgcaaccctcactctcctcgccttcccttccacggacatggccgccgctcccctctcccctcctcctcccctccacgcgcgcctcctcctcctcccgcctctcctcccgacgatggccgggggctcccgcggacggcggcgggggcgggggcgccgccggttcgcggtcccgccgtcgcggaacgggagctcgtcgcaggggacggagtggtgccccgtgccgccggagcagctgccggtgaacgagtacgagtcgctggcggcgtcgctgcccttctcgtgggcggcgggggacctcacggtctactgctcccgcctcgcgctcaccggcgccgccttcgcgctcttcgtcggcctccccgtcgcgtcgttcggcggccgcggaggggccggcggcgacgccgtgcacctcgcgctcggggccaccgggtccgggatactggccgtcacgctcgccgtggtgcggatgtacctcgggtgggcgtacgtcggcaaccgcctcctcagcgccaccgtggagtgtgaggaaaccccaaattactatatctcctttctttcgtttgtttccatgtttgcggatctgatttcagtgcctgattttcgcagatgaggaaacgggatggtacgacgggcaggtgagatactacgcttgatcctgtcattgactcatttctgtgattctagtgcagtactaacatggagtttatgcttacactggtatttttgggatcaagtagagaaagatttgacaggatatatatgccttgaccttgatctgatacttggcattgatttggtacttgctggacaatttggcatgctatttttcgtggaacatttggtttgccacaggacaagatcgctcatgttcctttacaacttacaactacaataactgggatatctttgacagcacgcttatttagctctggcttaacaagattttgtggctttagactttactgctttagctaaacaatagtggaataaaaaccaactttcctttgctttcttaaaagcagggcttcagtgccttttgtctcaaaaaaggggaaaatcaacagggatcactgaatcagaaatatatgcagtgccaccaaaagaacactcccaaaagtcactgccttgcttatcattgtactcaatagtcaatactgttgatgctcaagtcataccaattcttattagatatcacaccaataaccaactgctgaagtattagatttgcagctatatgcaatttcatagaattctcagattgttagcttgttatcaaggtgattatgaaattcagagataaaaatgacatgcatttttttaatcctaattttccccttgtcaccaagataaatggggttttagatcacaacaacctttcataataacatacccacagatatattaaattataaactgcagtagatctcctatattcctgtaaactcttaaaatacctttcttgttcactgagcagcaacgcgtccc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0539900, RefSeq:Os05g0539900