Difference between revisions of "Os05g0543100"
(Created page with "{{JaponicaGene|
GeneName = Os05g0543100|
Description = Similar to Clathrin coat assembly protein AP47 (Clathrin coat associated protein AP47) (Golgi adaptor AP-1 47 kDa prot...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0543100| | GeneName = Os05g0543100| | ||
Revision as of 20:14, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0543100 |
|---|---|
| Description |
Similar to Clathrin coat assembly protein AP47 (Clathrin coat associated protein AP47) (Golgi adaptor AP-1 47 kDa protein) (HA1 47 kDa subunit) (Clathrin assembly protein assembly protein complex 1 medium chain) (Uncoordinated protein 101) |
| Version |
NM_001062736.1 GI:115465202 GeneID:4339486 |
| Length |
3326 bp |
| Definition |
Oryza sativa Japonica Group Os05g0543100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:27013829..27017154 |
| Sequence Coding Region |
27014214..27014312,27014405..27014527,27014618..27014759,27014858..27014955,27015046..27015142 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:27013829..27017154 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:27013829..27017154 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggcgggggcggtgtcggcgctgttcctgctcgacatcaagggccgcgtcctcgtctggcgcgactaccgcggcgacgtctccgcgctccaggccgagcgcttcttcaccaagctcctcgacaaggagagcgacgcggaggtgctctcccccgtcgtccacgatgacgccggcgtctcctacatgttcatccagcacaacaatgtgttcctcctcaccgcgtcccgtcagaactgcaacgccgccagcatactcctcttcctccaccgcgtcgtcgatgtgttcaagcattacttcgaggagctggaggaggaatcattgagggacaacttcgtcgttgtgtatgagttgcttgatgagatgatggatttcgggtacccacaatacacggaagcaatgatcctgagcgagttcattaaaacggacgcgtacaggatggaggtcactcagaggccgcccatggcagtgacaaatgctgtgtcatggaggagcgaggggattcggtacaagaagaatgaagtgttcttggatgtggtggagagtgtcaatatcctcgttaacagcaatgggcagatagtgaggtctgatgtcatcggtgagctgaaaatgcgaacctttctaagtggaatgcccgagtgcaaactggggttgaatgatagggttctcttggaggctcaaggccgaacaactaaaggaaaagcaatagatttggacgatatcaaattccatcagtgtgttcggttggccagatttgagaatgacaggactatatccttcattcctccagatggatcatttgatctgatgacttacagacttagcacccaggtgaaacctcttatctgggtagaagcacaagtggagaaacattcaagaagtcggatacagatcacagtgaagacaagaagtcagttcaaagaaaggagcacagcaacaaatgtagaaattgaagtaccagtgcctgaggattcgacaaacccaaatataagaacttcaatgggctctgcggcatatgcacctgagagagatgcgatggtctggaaaataaaatcatttcctggtggcaaggaatatatgtgtagagcagaatttagccttccaagcataacatcagaagatggaatgcctgaaaagaaggctccgatacgtgtgaaatttgagataccgtattttaccgtgtcgggtattcaggttcgctatctgaaaatcatcgaaaagagtggatatcaggcccttccttgggttcgatacatcacaatggctggtgaatatgagttgagactcatctga</cdnaseq> |
| Protein Sequence |
<aaseq>MAAGAVSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKE SDAEVLSPVVHDDAGVSYMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEE LEEESLRDNFVVVYELLDEMMDFGYPQYTEAMILSEFIKTDAYRMEVTQRPPMAVTNA VSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVIGELKMRTFLSGMPECKLGL NDRVLLEAQGRTTKGKAIDLDDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLST QVKPLIWVEAQVEKHSRSRIQITVKTRSQFKERSTATNVEIEVPVPEDSTNPNIRTSM GSAAYAPERDAMVWKIKSFPGGKEYMCRAEFSLPSITSEDGMPEKKAPIRVKFEIPYF TVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLI</aaseq> |
| Gene Sequence |
<dnaseqindica>2843..2941#2628..2750#2396..2537#2200..2297#2013..2109#1799..1906#1118..1221#853..1029#686..748#434..583#221..352#agaggtgcacgagagcgcgcgcgccgcgccgcgcctcgcctcgctgatccggcaagcaaaccgcggcgccgcgacgcgacgcgaaccccgccgcgccgcgagtgtgggggagcacgaatggtagccggccgcggttaggtaggtgggcgccgcggggtgtcgatagctccggagggtgggggtggggggagcagatccagatccagcgagggcgcgagcaatggcggcgggggcggtgtcggcgctgttcctgctcgacatcaagggccgcgtcctcgtctggcgcgactaccgcggcgacgtctccgcgctccaggccgagcgcttcttcaccaagctcctcgacaaggaggtaatgcaatgccccctccatttcacctagatctgtgcaaatgccgggcttctcgatgagctttttgccctgtgtgatcagagcgacgcggaggtgctctcccccgtcgtccacgatgacgccggcgtctcctacatgttcatccagcacaacaatgtgttcctcctcaccgcgtcccgtcagaactgcaacgccgccagcatactcctcttcctccaccgcgtcgtcgatgtatgggttgctgcccccatcttcacagcaacattctgcgtttgttagtatggacaatgccattggattttgttcatatgatttgtgtgtgtgtgggcgtaggtgttcaagcattacttcgaggagctggaggaggaatcattgagggacaacttcgtcgttgtggtatgtgcgcttgcgtgttacgtgaactgagtactgggtctggttcaatcggaattgccgtgtcactgaaattggagggttgatgtcatttgctgtgtgtgtagtatgagttgcttgatgagatgatggatttcgggtacccacaatacacggaagcaatgatcctgagcgagttcattaaaacggacgcgtacaggatggaggtcactcagaggccgcccatggcagtgacaaatgctgtgtcatggaggagcgaggggattcggtacaagaagaatgaagtctgatacactacacctgtatttttatttttttggttcacatgaacgtgtgatggatttagaaaattatcaacattttgtgctgcaggtgttcttggatgtggtggagagtgtcaatatcctcgttaacagcaatgggcagatagtgaggtctgatgtcatcggtgagctgaaaatgcgaacctttctaaggtagtaactgcatggtcattctcatatcacaaattcacattgtgctgataactcagctgcttcagtaataatttaatgggagttgcagttagagggatgcgaaacactgtttttatatgatgtatccaacccattattgtgaacttctagtttaactgtttatcacatcactgaagcaagttgatattgatgaataaagactattaaattgtgtatacaatattctgccaactatgagtctacgacatatatgttgcaaccatgtcaaataaatgtaggtaatgtaattctcatccagataatagcatcaaacagtacataaaaatgaactttgttgcagtatgtaataatgctctaattggactagtcattgacctgactagtttgtatttcagactatctgttggattgtccaagatatcgttagactatatgtttcccaagtacccagttacgttatgaatgctaagtggactagccattgaactgactagtttgtttttcagacgatctggtagattgtccaaaatatatgttcaacttatgcatcatagctaatatccatctgcttgtacagtggaatgcccgagtgcaaactggggttgaatgatagggttctcttggaggctcaaggccgaacaactaaaggaaaagcaatagatttggacgatatcaaattccatcagtaagatactaacatacagtataactatgatggttctttatcaaatgtaattcatttctattacatcatccatgttacaactctgaattggccaaaccttcgttaggtgtgttcggttggccagatttgagaatgacaggactatatccttcattcctccagatggatcatttgatctgatgacttacagacttagcacccaggtttgtccctgcttgatctttgctgctagtatagcgctaggttatgatctatatttcacctaatctatcttcctctggtccctcccacaggtgaaacctcttatctgggtagaagcacaagtggagaaacattcaagaagtcggatacagatcacagtgaagacaagaagtcagttcaaagaaaggaggtgttattttattttattttcttaaaaaagcgataatgtctctgcatcagtgtcttagttccagacaagttactgttattgttttttctcatttccagcacagcaacaaatgtagaaattgaagtaccagtgcctgaggattcgacaaacccaaatataagaacttcaatgggctctgcggcatatgcacctgagagagatgcgatggtctggaaaataaaatcatttcctggtggcaaggtaagtgctgagttgataccaacttaccactttgcctttcacttttgtgctatgtccatcaactctaatttcctagaatctctccattaggaatatatgtgtagagcagaatttagccttccaagcataacatcagaagatggaatgcctgaaaagaaggctccgatacgtgtgaaatttgagataccgtattttaccgtgtcgggtattcaggtaacataccaaattatgttgcacatctcttaccactatgtttggaacttcctttggtatcctactcctttattgactttgtgcttttgcaggttcgctatctgaaaatcatcgaaaagagtggatatcaggcccttccttgggttcgatacatcacaatggctggtgaatatgagttgagactcatctgattttcacacctctggttgctggaagaaatgattgatttcctggagtccaagcctcccagggggcgtttacagaggcaactcagacgaacattcactcgctggatgggctcccgaggcttcatggttccatctcgcgcaagcgaggaaagctgctgacagccatgttattgattttacccatgttttgctgcaagtttgtcatcagtataggtccccagaatcttcatttcttttctgcgttttgttcccagccgatatctcttgtatcattgtaaaatttatttaatcaactgatgtcacaagcttggatttttttttgtatctcctgtacctaattaacaagcttggatcatgtataccactatgtatatctctcctttccatc</dnaseqindica> |
| External Link(s) |
