Difference between revisions of "Os05g0560000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0560000| Description = Photosystem I reaction center subunit VI, chloroplast precursor (PSI- H) (Light-harvesting complex I 11 kDa protein) (...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0560000|
 
GeneName = Os05g0560000|

Revision as of 20:14, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0560000

Description

Photosystem I reaction center subunit VI, chloroplast precursor (PSI- H) (Light-harvesting complex I 11 kDa protein) (GOS5 protein)

Version

NM_001062839.1 GI:115465408 GeneID:4339593

Length

882 bp

Definition

Oryza sativa Japonica Group Os05g0560000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27960244..27961125

Sequence Coding Region

27960315..27960433,27960562..27960691,27960770..27960949

Expression

GEO Profiles:Os05g0560000

Genome Context

<gbrowseImage1> name=NC_008398:27960244..27961125 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27960244..27961125 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccctcgtcgccgtccagcctgtcgccgtgaagggcctcgccggcagctccatctccggcaggaagctcgccgtcaggccgtcgccccgggcgctctgccgcaccacccgcaggccgcgcgccgccgtggtggccaagtacggcgagaagagcgtctacttcgacctcgaggacatcggcaacaccaccgggcagtgggacctgtacggctccgacgcgccgtcgccgtacaaccctctccagagcaagttcttcgagacgttcgcggggcccttcaccaagagggggctcctgctcaagttcctgctgctcggcggcggatcgctggtggcctacgtcagcgcgtcggcgtcgccagacctgcttccgatcaagaagggcccgcagctgccgccgacgcccggcccacgcggcaagatctaa</cdnaseq>

Protein Sequence

<aaseq>MASLVAVQPVAVKGLAGSSISGRKLAVRPSPRALCRTTRRPRAA VVAKYGEKSVYFDLEDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAGPFTKRGLLLK FLLLGGGSLVAYVSASASPDLLPIKKGPQLPPTPGPRGKI</aaseq>

Gene Sequence

<dnaseqindica>72..190#319..448#527..706#gcagatagtacaccggctatctatccatctatctactcagctttgcgtcctcccgcgaattcaccgcagcaatggcgtccctcgtcgccgtccagcctgtcgccgtgaagggcctcgccggcagctccatctccggcaggaagctcgccgtcaggccgtcgccccgggcgctctgccgcaccacccgcaggtacatacgaggagtacgcgagtaacagtggagatgcacttgatattgcagtggcaagaggtgtatgtggtttcaatcccgagatcccgtgttcaattcttatcacgctcataatttctttgctacaggccgcgcgccgccgtggtggccaagtacggcgagaagagcgtctacttcgacctcgaggacatcggcaacaccaccgggcagtgggacctgtacggctccgacgcgccgtcgccgtacaaccctctccaggttagtattacctgactaaaatatatacttagctcgatgattaatttactgaataattcgtgtgggtgatcgatgcagagcaagttcttcgagacgttcgcggggcccttcaccaagagggggctcctgctcaagttcctgctgctcggcggcggatcgctggtggcctacgtcagcgcgtcggcgtcgccagacctgcttccgatcaagaagggcccgcagctgccgccgacgcccggcccacgcggcaagatctaaattaaattcctcgtctctgcctcaccttcttcttgatccgatccatccatgcaaatcctctgtactgtactgctagtcccccatggccggatcgccatggattaattccccctgtttatgatgttgatataattgtactattcctatggctatataagttgtaaaggatccaattc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0560000, RefSeq:Os05g0560000