Difference between revisions of "Os05g0567400"
(Created page with "{{JaponicaGene|
GeneName = Os05g0567400|
Description = Ribosomal RNA methyltransferase RrmJ/FtsJ domain containing protein|
Version = NM_001062885.1 GI:115465500 GeneID:433...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0567400| | GeneName = Os05g0567400| | ||
Revision as of 20:15, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0567400 |
|---|---|
| Description |
Ribosomal RNA methyltransferase RrmJ/FtsJ domain containing protein |
| Version |
NM_001062885.1 GI:115465500 GeneID:4339641 |
| Length |
4547 bp |
| Definition |
Oryza sativa Japonica Group Os05g0567400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:28326611..28331157 |
| Sequence Coding Region |
28326726..28327199,28327561..28327608,28327690..28327843,28327938..28327986,28328240..28328402 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:28326611..28331157 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:28326611..28331157 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggaagacgaaggggaagcagcggcaggacaagttctaccacctcgccaaggagcaggggtaccggagccgcgcggccttcaagctgctccagctcgacgcgcggttccgcttcctgccgacggcgcgcgcggtgctcgacctctgcgcggcgcccgggggatgggtccaggtggccgtcaaccacgcgcccgtgggggccttcgtcgtcggcgtcgacctcgtccccatccgccccatccgcggcgcgcactccctcacggaggacatcaccaccaccaagtgccgcgccgccgtgcggaggctcatggactccaacggcgtcgccgcgttcgacgtcgtgctccacgacgggtcccccaacgtcggtggcgcgtgggcgcaggaggccaccgcgcaatcgtcgctcgtcatcgacgccgtgcgcctcgccaccatgttcctcgcccccaagggtgccttcatcactaaggttttcaggtctcaggattacaacgctattatgtactgtcttaaacagttatttgagaaggttgaagtcactaaacctactgcaagtcgttctacgtctgcagaaatttatattatctgtctgagatataaagctcctgcaaagattcagccagaacttttggatataaagcatttgttcagtgtggatccagatcctaaaaaggttagggatcctctcaagccggacagacagaagaggaaccgtgatggatacgaagaaggaaatacaacattgcgaaaagttggtctggcttcagattttatatggtctgagggccaaacgcccctagagtttcttggttcttttaatgcaatttcatttgatgacccagcatctcttcctatcaagaaccatgagcttactacagatgagataaaagctctttgtgaggatttgtatgtactggacaaaaacagcttcaagcatatcttgaaatggcggatacgcatacggaaagcactatcatcttctgaagtcactaaaaaaactgatgatactgcggtggaagtcaatgtcaaggatgatgaccaacttctacaggaaatggaagaattgacgagtgtcattgatagaaagaagaagagagaaaagaagcgtcaatcaaagcgccgtgcaaaggataaagcacgcaaagcaacaggaatgcaaatagatgctacaggagataattacggcgatcctgatttgttttctataagtgctatcaagggcggaaaagaactccaagctattgaatcggctgagcttaatgtagaagatgcccaaggagatagtgagaatgaggatattcaaactcgtgaatactctgatgaggaaatggattctgacgaagaacagcagaggtatgatgcccaacttgaggaaatgcttgatgaagcttatgagcgttatgtaactaaaaagggtggtgaagtgaaacaagaacgcaagcgtgcaaaacgagtaaatactgatgctgatgaagaattattagagggaggtgaagatgacggtgacgatgttgacatggatcaaggttctgatgaagagcaagatcaagagaccaatccccttttattatccctagatgcagagaaaccaacaaaagagcagatgatggagcagtggttcagccaggatgtattcacagaagcaggaacaggtgtggttgagcagagtgatagtgaagatgaaagagagcagctaactaggattgcaaaaaagaaggcggattctggaaagaaggaaaagtctgctaaagcaaaacacttgcaacaggacgattttgagattgtgccagcagaaccagtccgaactgaagatgactcatcttcatcttctgatgagtctgatgaactagatgaggacctcgacgatgacacaaaagctgaagtactagcctatgcaaggaagatgttgaggaagaaacagagagagcagatacttgacgacgcttacaacaagtacatgtttgacgacgagggtttacctaaatggtttgctgaggatgaaaagaggcataaccagcctatgaagcctgtaacaaaagaggaggtagctgccatgagggctcagttcaaggagatcgatgctcggccagccaagaaggtcgctgaggctaaggctcggaagaagcgcgtcgccatgaagaagctggataaggcgcgccagaaggcagatgccatcgcagatcaaaacgacataaacgagcagtcaaagaggaagatgatcgacaggatttacaagaaggcgattccaaagaagccccagaaggagtacgttgtcgcaaagaagggcgttcaggtgagggctggcaaagggaagatactggtggataagcgtatgaagaaggacaagagggccagcaaagtgaagggtggcaaaggagctaagggcaaggggaagaagggcggcggccagaaaggcggtatgcgagggaaagctgggaggaaagcccaaaactga</cdnaseq> |
| Protein Sequence |
<aaseq>MGKTKGKQRQDKFYHLAKEQGYRSRAAFKLLQLDARFRFLPTAR AVLDLCAAPGGWVQVAVNHAPVGAFVVGVDLVPIRPIRGAHSLTEDITTTKCRAAVRR LMDSNGVAAFDVVLHDGSPNVGGAWAQEATAQSSLVIDAVRLATMFLAPKGAFITKVF RSQDYNAIMYCLKQLFEKVEVTKPTASRSTSAEIYIICLRYKAPAKIQPELLDIKHLF SVDPDPKKVRDPLKPDRQKRNRDGYEEGNTTLRKVGLASDFIWSEGQTPLEFLGSFNA ISFDDPASLPIKNHELTTDEIKALCEDLYVLDKNSFKHILKWRIRIRKALSSSEVTKK TDDTAVEVNVKDDDQLLQEMEELTSVIDRKKKREKKRQSKRRAKDKARKATGMQIDAT GDNYGDPDLFSISAIKGGKELQAIESAELNVEDAQGDSENEDIQTREYSDEEMDSDEE QQRYDAQLEEMLDEAYERYVTKKGGEVKQERKRAKRVNTDADEELLEGGEDDGDDVDM DQGSDEEQDQETNPLLLSLDAEKPTKEQMMEQWFSQDVFTEAGTGVVEQSDSEDEREQ LTRIAKKKADSGKKEKSAKAKHLQQDDFEIVPAEPVRTEDDSSSSSDESDELDEDLDD DTKAEVLAYARKMLRKKQREQILDDAYNKYMFDDEGLPKWFAEDEKRHNQPMKPVTKE EVAAMRAQFKEIDARPAKKVAEAKARKKRVAMKKLDKARQKADAIADQNDINEQSKRK MIDRIYKKAIPKKPQKEYVVAKKGVQVRAGKGKILVDKRMKKDKRASKVKGGKGAKGK GKKGGGQKGGMRGKAGRKAQN</aaseq> |
| Gene Sequence |
<dnaseqindica>116..589#951..998#1080..1233#1328..1376#1630..1792#1891..1952#2116..2299#2389..2478#2849..2982#3100..3232#3399..4367#aaaaccctagcgctctctctctctccccccccaccctcccttcgcctatagctgaggcggcggctcgtcggcggcggcggcggcggaggaggaggaggaggaggaggaggcagcaatggggaagacgaaggggaagcagcggcaggacaagttctaccacctcgccaaggagcaggggtaccggagccgcgcggccttcaagctgctccagctcgacgcgcggttccgcttcctgccgacggcgcgcgcggtgctcgacctctgcgcggcgcccgggggatgggtccaggtggccgtcaaccacgcgcccgtgggggccttcgtcgtcggcgtcgacctcgtccccatccgccccatccgcggcgcgcactccctcacggaggacatcaccaccaccaagtgccgcgccgccgtgcggaggctcatggactccaacggcgtcgccgcgttcgacgtcgtgctccacgacgggtcccccaacgtcggtggcgcgtgggcgcaggaggccaccgcgcaatcgtcgctcgtcatcgacgccgtgcgcctcgccaccatgttcctcgcccccaagggtgccttcatcactaaggtaattatttatccacaaatccgctccttttaggcgtagttgttgcattgttgaatggtcttagctactgcttacattagcagttgggagtgatgcatttttcttaccgaggttaaaaactcaaaaactttatatgctctgtatatgcgattaaaaaattgttctacagattgtgatgaataatttttagtttcgtaggaaagtgttatgtagtccctctcgtattgtaacaggctagtgcaattattagttcatagaggttgagaacgatgctattagttccctcagacaaaatttctctaatgggtgttcctgtattttctgtagccctccttaaccagctgttccttgtcttctacaggttttcaggtctcaggattacaacgctattatgtactgtcttaaacaggtgcatattactctaaggtttgattacatttttctttttctaaatgtagtttcttgatgtatcaaatatatctgcatgcagttatttgagaaggttgaagtcactaaacctactgcaagtcgttctacgtctgcagaaatttatattatctgtctgagatataaagctcctgcaaagattcagccagaacttttggatataaagcatttgttcagtgtggatccagatcctaaaaaggcatgttgaaacatttatcctacttatattcttggtttctcatcttttctgtgctagcatccatttgatgttttgaattttacggcttctacaggttagggatcctctcaagccggacagacagaagaggaaccgtgatgggtaggctatccctattacatcatctctggatcttgcctactaattttggttaattctattttttcgtcttagcatacacttcaatacaatgctggcctgattcccaactttcaattgtgtaatcatttactcttgaccctaactaccaaaatagtatttttccaggatttatagctttaaatttccacttgtatagatgtcagttttgtggcaatatagcattttgaatttctacattgcacaatttatgcagatacgaagaaggaaatacaacattgcgaaaagttggtctggcttcagattttatatggtctgagggccaaacgcccctagagtttcttggttcttttaatgcaatttcatttgatgacccagcatctcttcctatcaagaaccatgagcttactacagatgaggtagtggactaatgcctttcctccgtatgctggctgatatattgtcttctatattgaatagtcatattgatggctgcatattgtttgctgtgtgacagataaaagctctttgtgaggatttgtatgtactggacaaaaacagcttcaagcatatcttgaagtaagtagtttaccacatgagggtgattactgatgtattttattgcacagattaattctgttgagtttaagtggttatggttatctatgtgtataagttgggatattcagagcttagtcttgtcaatatcatgaatgaaactaattttgtatgatgctgttagatggcggatacgcatacggaaagcactatcatcttctgaagtcactaaaaaaactgatgatactgcggtggaagtcaatgtcaaggatgatgaccaacttctacaggaaatggaagaattgacgagtgtcattgatagaaagaagaagagagaaaagaagcgtcaatcaaagcgccgtgcaaaggtatatcagtcatgagatatagatgctgccattgccaaatgggtggttaatttgagttatgtgctaatacactggtcttttcgttccaggataaagcacgcaaagcaacaggaatgcaaatagatgctacaggagataattacggcgatcctgatttgttttctataagtgctatcaaggttcatgctgtttctgtagtcatatcctgtgtggttcttaagtatttagtactaatatttgtttaaaatcataggacaggtgttcatttgcatggctataattttcctgaatttgaaagtgtgcttcttttctttgcacttgaaatatgcaacgttcgtgctcctcagtaaagtttcacttttattgatctctccatgcgacaatttcttagtgtggtagcctttatcagtattcacaaacttagtaaattgattttcgttatgttacgctttctcaaagttactttccagtatgagctgtatagtctacacttgtcttgtgtaatacttactatcatctaaatagatagtttgtgtcatttttctgtagggcggaaaagaactccaagctattgaatcggctgagcttaatgtagaagatgcccaaggagatagtgagaatgaggatattcaaactcgtgaatactctgatgaggaaatggattctgacgaagaacagcagaggtaaatttcgaaattaacactcaataaaacatacaataagccggtcataaatttttacaggttttataattttaccgcaatcccaaaaatgtgtaacatggtaatcttcccaaccaggtatgatgcccaacttgaggaaatgcttgatgaagcttatgagcgttatgtaactaaaaagggtggtgaagtgaaacaagaacgcaagcgtgcaaaacgagtaaatactgatgctgatgaagaattattagaggtaatctctgacacatggatcttgtctcaaccaaatgacaattgcatctttcggtctctctgcatgcaattggggtagttaattatgccaatttacacactgccctttatataactagattgcatgggtggtaatagttgttatccttatggtctgaacttaatagggaggtgaagatgacggtgacgatgttgacatggatcaaggttctgatgaagagcaagatcaagagaccaatccccttttattatccctagatgcagagaaaccaacaaaagagcagatgatggagcagtggttcagccaggatgtattcacagaagcaggaacaggtgtggttgagcagagtgatagtgaagatgaaagagagcagctaactaggattgcaaaaaagaaggcggattctggaaagaaggaaaagtctgctaaagcaaaacacttgcaacaggacgattttgagattgtgccagcagaaccagtccgaactgaagatgactcatcttcatcttctgatgagtctgatgaactagatgaggacctcgacgatgacacaaaagctgaagtactagcctatgcaaggaagatgttgaggaagaaacagagagagcagatacttgacgacgcttacaacaagtacatgtttgacgacgagggtttacctaaatggtttgctgaggatgaaaagaggcataaccagcctatgaagcctgtaacaaaagaggaggtagctgccatgagggctcagttcaaggagatcgatgctcggccagccaagaaggtcgctgaggctaaggctcggaagaagcgcgtcgccatgaagaagctggataaggcgcgccagaaggcagatgccatcgcagatcaaaacgacataaacgagcagtcaaagaggaagatgatcgacaggatttacaagaaggcgattccaaagaagccccagaaggagtacgttgtcgcaaagaagggcgttcaggtgagggctggcaaagggaagatactggtggataagcgtatgaagaaggacaagagggccagcaaagtgaagggtggcaaaggagctaagggcaaggggaagaagggcggcggccagaaaggcggtatgcgagggaaagctgggaggaaagcccaaaactgagtagcaatagagcatgactgaattttctactgaatttttgttcagtggctctactgctcaatttttgtttacttataacttaccgaattcatatgtacggaatttttaaatgcgtgaattatcagttgtctcgtcagattatattttcagtcccatcgttttttaagcctacaactgatt</dnaseqindica> |
| External Link(s) |
